RNA–Protein interactions for RNA: ENST00000424898.2

PDZD9-201, Transcript of PDZ domain containing 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDZD9, Length 1,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD9-201ENST00000424898 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
PDZD9-201ENST00000424898 AK7Q96M32 723 aa16.46■□□□□ 0.23
PDZD9-201ENST00000424898 NMRK2Q9NPI5 230 aa16.46■□□□□ 0.23
PDZD9-201ENST00000424898 MAP2P11137 1827 aaKnown RBP16.46■□□□□ 0.23
PDZD9-201ENST00000424898 MTHFSP49914 203 aa16.45■□□□□ 0.22
PDZD9-201ENST00000424898 JMYQ8N9B5 988 aa16.44■□□□□ 0.22
PDZD9-201ENST00000424898 CNKSR2Q8WXI2 1034 aa16.44■□□□□ 0.22
PDZD9-201ENST00000424898 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
PDZD9-201ENST00000424898 SMIM5Q71RC9 77 aa16.43■□□□□ 0.22
PDZD9-201ENST00000424898 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
PDZD9-201ENST00000424898 PALLDQ8WX93 1383 aa16.42■□□□□ 0.22
PDZD9-201ENST00000424898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.42■□□□□ 0.22
PDZD9-201ENST00000424898 PPP2R1AP30153 589 aa16.42■□□□□ 0.22
PDZD9-201ENST00000424898 MPRIPQ6WCQ1 1025 aa16.42■□□□□ 0.22
PDZD9-201ENST00000424898 ARHGAP27Q6ZUM4 889 aa16.42■□□□□ 0.22
PDZD9-201ENST00000424898 BCS1LQ9Y276 419 aa16.42■□□□□ 0.22
PDZD9-201ENST00000424898 C5P01031 1676 aa16.42■□□□□ 0.22
PDZD9-201ENST00000424898 CFAP53Q96M91 514 aa16.41■□□□□ 0.22
PDZD9-201ENST00000424898 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
PDZD9-201ENST00000424898 AMIGO3Q86WK7 504 aa16.4■□□□□ 0.22
PDZD9-201ENST00000424898 MEGF6O75095 1541 aa16.4■□□□□ 0.22
PDZD9-201ENST00000424898 EIF4A2Q14240 407 aaKnown RBP16.39■□□□□ 0.21
PDZD9-201ENST00000424898 NBPF6Q5VWK0 638 aa16.39■□□□□ 0.21
PDZD9-201ENST00000424898 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
PDZD9-201ENST00000424898 NBPF4Q96M43 638 aa16.39■□□□□ 0.21
PDZD9-201ENST00000424898 FAM208AQ9UK61 1670 aaKnown RBP16.39■□□□□ 0.21
PDZD9-201ENST00000424898 DIAPH1O60610 1272 aaKnown RBP16.38■□□□□ 0.21
PDZD9-201ENST00000424898 FSTL1Q12841 308 aa16.38■□□□□ 0.21
PDZD9-201ENST00000424898 SMARCC1Q92922 1105 aaPredicted RBP16.38■□□□□ 0.21
PDZD9-201ENST00000424898 PRKRIP1Q9H875 184 aaPredicted RBP16.38■□□□□ 0.21
PDZD9-201ENST00000424898 ANP32CO43423 234 aa16.37■□□□□ 0.21
PDZD9-201ENST00000424898 USHBP1Q8N6Y0 703 aa16.37■□□□□ 0.21
PDZD9-201ENST00000424898 MYBBP1AQ9BQG0 1328 aaKnown RBP16.37■□□□□ 0.21
PDZD9-201ENST00000424898 CICQ96RK0 1608 aaPredicted RBP16.37■□□□□ 0.21
PDZD9-201ENST00000424898 A0A0G2JLW4 131 aa16.36■□□□□ 0.21
PDZD9-201ENST00000424898 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
PDZD9-201ENST00000424898 MMP10P09238 476 aa16.36■□□□□ 0.21
PDZD9-201ENST00000424898 SSFA2P28290 1259 aa16.36■□□□□ 0.21
PDZD9-201ENST00000424898 EYA1Q99502 592 aa16.36■□□□□ 0.21
PDZD9-201ENST00000424898 C4BP0C0L5 1744 aa16.36■□□□□ 0.21
PDZD9-201ENST00000424898 TATP17735 454 aaPredicted RBP16.35■□□□□ 0.21
PDZD9-201ENST00000424898 IL13P35225 146 aa16.35■□□□□ 0.21
PDZD9-201ENST00000424898 TGFB2P61812 414 aa16.35■□□□□ 0.21
PDZD9-201ENST00000424898 C9orf131Q5VYM1 1079 aa16.35■□□□□ 0.21
PDZD9-201ENST00000424898 TAF1LQ8IZX4 1826 aa16.34■□□□□ 0.21
PDZD9-201ENST00000424898 FCHSD2O94868 740 aa16.34■□□□□ 0.21
PDZD9-201ENST00000424898 NUDCQ9Y266 331 aa16.34■□□□□ 0.21
PDZD9-201ENST00000424898 PCDH11XQ9BZA7 1347 aa16.34■□□□□ 0.21
PDZD9-201ENST00000424898 PCDH11YQ9BZA8 1340 aa16.34■□□□□ 0.21
PDZD9-201ENST00000424898 PXDNLA1KZ92 1463 aa16.34■□□□□ 0.21
PDZD9-201ENST00000424898 GNPATO15228 680 aa16.33■□□□□ 0.2
PDZD9-201ENST00000424898 KDM2BQ8NHM5 1336 aa16.33■□□□□ 0.2
PDZD9-201ENST00000424898 RRAGCQ9HB90 399 aa16.32■□□□□ 0.2
PDZD9-201ENST00000424898 RGPD2P0DJD1 1756 aa16.31■□□□□ 0.2
PDZD9-201ENST00000424898 U2SURPO15042 1029 aaKnown RBP16.31■□□□□ 0.2
PDZD9-201ENST00000424898 HSPA1AP0DMV8 641 aaKnown RBP16.31■□□□□ 0.2
PDZD9-201ENST00000424898 HSPA1BP0DMV9 641 aaKnown RBP16.31■□□□□ 0.2
PDZD9-201ENST00000424898 DPEP1P16444 411 aa16.31■□□□□ 0.2
PDZD9-201ENST00000424898 LINC00116Q8NCU8 138 aa16.31■□□□□ 0.2
PDZD9-201ENST00000424898 TOGARAM1Q9Y4F4 1720 aa16.31■□□□□ 0.2
PDZD9-201ENST00000424898 PLEKHG2Q9H7P9 1386 aa16.3■□□□□ 0.2
PDZD9-201ENST00000424898 LOC102724428A0A0B4J2F2 783 aa16.3■□□□□ 0.2
PDZD9-201ENST00000424898 SIK1P57059 783 aa16.3■□□□□ 0.2
PDZD9-201ENST00000424898 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
PDZD9-201ENST00000424898 PIGBQ92521 554 aa16.3■□□□□ 0.2
PDZD9-201ENST00000424898 UBR3Q6ZT12 1888 aa16.3■□□□□ 0.2
PDZD9-201ENST00000424898 NCAPD2Q15021 1401 aa16.29■□□□□ 0.2
PDZD9-201ENST00000424898 SULT6B1Q6IMI4 303 aa16.29■□□□□ 0.2
PDZD9-201ENST00000424898 KCPQ6ZWJ8 1503 aa16.29■□□□□ 0.2
PDZD9-201ENST00000424898 COL3A1P02461 1466 aaPredicted RBP16.29■□□□□ 0.2
PDZD9-201ENST00000424898 CYP27B1O15528 508 aa16.28■□□□□ 0.2
PDZD9-201ENST00000424898 NLGN1Q8N2Q7 840 aa16.28■□□□□ 0.2
PDZD9-201ENST00000424898 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
PDZD9-201ENST00000424898 RNF181Q9P0P0 153 aa16.28■□□□□ 0.2
PDZD9-201ENST00000424898 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
PDZD9-201ENST00000424898 ATP6V1AP38606 617 aa16.27■□□□□ 0.2
PDZD9-201ENST00000424898 U2AF1L5P0DN76 240 aaPredicted RBP16.26■□□□□ 0.19
PDZD9-201ENST00000424898 DSG3P32926 999 aa16.26■□□□□ 0.19
PDZD9-201ENST00000424898 U2AF1Q01081 240 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDZD9-201ENST00000424898 TRAPPC3LQ5T215 181 aa16.26■□□□□ 0.19
PDZD9-201ENST00000424898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDZD9-201ENST00000424898 SPG7Q9UQ90 795 aa16.26■□□□□ 0.19
PDZD9-201ENST00000424898 KDRP35968 1356 aa16.26■□□□□ 0.19
PDZD9-201ENST00000424898 HMOX1P09601 288 aa16.25■□□□□ 0.19
PDZD9-201ENST00000424898 ITPK1Q13572 414 aa16.25■□□□□ 0.19
PDZD9-201ENST00000424898 AEBP1Q8IUX7 1158 aa16.25■□□□□ 0.19
PDZD9-201ENST00000424898 PIM2Q9P1W9 311 aa16.25■□□□□ 0.19
PDZD9-201ENST00000424898 PARP3Q9Y6F1 533 aa16.25■□□□□ 0.19
PDZD9-201ENST00000424898 C10orf71Q711Q0 1435 aa16.25■□□□□ 0.19
PDZD9-201ENST00000424898 AMOTQ4VCS5 1084 aa16.24■□□□□ 0.19
PDZD9-201ENST00000424898 PLEKHO1Q53GL0 409 aaPredicted RBP16.24■□□□□ 0.19
PDZD9-201ENST00000424898 DIEXFQ68CQ4 756 aaKnown RBP16.24■□□□□ 0.19
PDZD9-201ENST00000424898 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
PDZD9-201ENST00000424898 RTCBQ9Y3I0 505 aaKnown RBP16.24■□□□□ 0.19
PDZD9-201ENST00000424898 PCNTO95613 3336 aa16.24■□□□□ 0.19
PDZD9-201ENST00000424898 SLC34A2O95436 690 aa16.23■□□□□ 0.19
PDZD9-201ENST00000424898 DALRD3Q5D0E6 543 aaKnown RBP16.23■□□□□ 0.19
PDZD9-201ENST00000424898 PNNQ9H307 717 aaKnown RBP16.23■□□□□ 0.19
PDZD9-201ENST00000424898 ASAP1Q9ULH1 1129 aa16.23■□□□□ 0.19
PDZD9-201ENST00000424898 KIF13BQ9NQT8 1826 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms