RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SLC4A9Q96Q91 983 aa24.02■■□□□ 1.44
SBDSP1-202ENST00000423945 CABP4P57796 275 aa24.01■■□□□ 1.43
SBDSP1-202ENST00000423945 COL23A1Q86Y22 540 aaPredicted RBP24.01■■□□□ 1.43
SBDSP1-202ENST00000423945 LINC00116Q8NCU8 138 aa24.01■■□□□ 1.43
SBDSP1-202ENST00000423945 LGR6Q9HBX8 967 aa24.01■■□□□ 1.43
SBDSP1-202ENST00000423945 PPP1R1BQ9UD71 204 aaPredicted RBP24.01■■□□□ 1.43
SBDSP1-202ENST00000423945 SLC16A10Q8TF71 515 aa24■■□□□ 1.43
SBDSP1-202ENST00000423945 MRC1P22897 1456 aa24■■□□□ 1.43
SBDSP1-202ENST00000423945 COL5A3P25940 1745 aaPredicted RBP23.99■■□□□ 1.43
SBDSP1-202ENST00000423945 NFATC2IPQ8NCF5 419 aa23.99■■□□□ 1.43
SBDSP1-202ENST00000423945 CFAP53Q96M91 514 aa23.99■■□□□ 1.43
SBDSP1-202ENST00000423945 RNMTO43148 476 aaKnown RBP23.98■■□□□ 1.43
SBDSP1-202ENST00000423945 ATP6V1AP38606 617 aa23.97■■□□□ 1.43
SBDSP1-202ENST00000423945 SMIM5Q71RC9 77 aa23.97■■□□□ 1.43
SBDSP1-202ENST00000423945 RSPH6AQ9H0K4 717 aa23.97■■□□□ 1.43
SBDSP1-202ENST00000423945 DDX10Q13206 875 aaKnown RBP23.95■■□□□ 1.42
SBDSP1-202ENST00000423945 PHACTR3Q96KR7 559 aa23.95■■□□□ 1.42
SBDSP1-202ENST00000423945 SLC52A2Q9HAB3 445 aa23.95■■□□□ 1.42
SBDSP1-202ENST00000423945 TJP1Q07157 1748 aa23.95■■□□□ 1.42
SBDSP1-202ENST00000423945 AK7Q96M32 723 aa23.94■■□□□ 1.42
SBDSP1-202ENST00000423945 RBM42Q9BTD8 480 aaKnown RBP23.94■■□□□ 1.42
SBDSP1-202ENST00000423945 CICQ96RK0 1608 aaPredicted RBP23.94■■□□□ 1.42
SBDSP1-202ENST00000423945 MYH14Q7Z406 1995 aaKnown RBP23.94■■□□□ 1.42
SBDSP1-202ENST00000423945 HMGB2P26583 209 aaKnown RBP23.93■■□□□ 1.42
SBDSP1-202ENST00000423945 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
SBDSP1-202ENST00000423945 ARXQ96QS3 562 aa23.92■■□□□ 1.42
SBDSP1-202ENST00000423945 FHDC1Q9C0D6 1143 aaPredicted RBP23.92■■□□□ 1.42
SBDSP1-202ENST00000423945 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
SBDSP1-202ENST00000423945 SIPA1L3O60292 1781 aaPredicted RBP23.91■■□□□ 1.42
SBDSP1-202ENST00000423945 MSH5O43196 834 aa23.91■■□□□ 1.42
SBDSP1-202ENST00000423945 MAP3K5Q99683 1374 aa23.91■■□□□ 1.42
SBDSP1-202ENST00000423945 PTCD1O75127 700 aaKnown RBP23.9■■□□□ 1.42
SBDSP1-202ENST00000423945 U2AF1L5P0DN76 240 aaPredicted RBP23.9■■□□□ 1.42
SBDSP1-202ENST00000423945 U2AF1Q01081 240 aaKnown RBP eCLIP23.9■■□□□ 1.42
SBDSP1-202ENST00000423945 FLAD1Q8NFF5 587 aa23.9■■□□□ 1.42
SBDSP1-202ENST00000423945 GAS2L2Q8NHY3 880 aa23.9■■□□□ 1.42
SBDSP1-202ENST00000423945 KCPQ6ZWJ8 1503 aa23.89■■□□□ 1.42
SBDSP1-202ENST00000423945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.89■■□□□ 1.41
SBDSP1-202ENST00000423945 PHF14O94880 888 aa23.89■■□□□ 1.41
SBDSP1-202ENST00000423945 MSL1Q68DK7 614 aa23.89■■□□□ 1.41
SBDSP1-202ENST00000423945 IL17REQ8NFR9 667 aa23.89■■□□□ 1.41
SBDSP1-202ENST00000423945 SYT17Q9BSW7 474 aa23.89■■□□□ 1.41
SBDSP1-202ENST00000423945 UBR2Q8IWV8 1755 aa23.88■■□□□ 1.41
SBDSP1-202ENST00000423945 SSFA2P28290 1259 aa23.88■■□□□ 1.41
SBDSP1-202ENST00000423945 SLC39A6Q13433 755 aa23.88■■□□□ 1.41
SBDSP1-202ENST00000423945 GNAT3A8MTJ3 354 aa23.87■■□□□ 1.41
SBDSP1-202ENST00000423945 GNPATO15228 680 aa23.87■■□□□ 1.41
SBDSP1-202ENST00000423945 FCHSD2O94868 740 aa23.87■■□□□ 1.41
SBDSP1-202ENST00000423945 CNTNAP4Q9C0A0 1308 aa23.85■■□□□ 1.41
SBDSP1-202ENST00000423945 POLD1P28340 1107 aa23.85■■□□□ 1.41
SBDSP1-202ENST00000423945 RC3H1Q5TC82 1133 aaKnown RBP23.85■■□□□ 1.41
SBDSP1-202ENST00000423945 CEMIPQ8WUJ3 1361 aa23.85■■□□□ 1.41
SBDSP1-202ENST00000423945 RALBP1Q15311 655 aa23.84■■□□□ 1.41
SBDSP1-202ENST00000423945 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.41
SBDSP1-202ENST00000423945 C4AP0C0L4 1744 aa23.83■■□□□ 1.41
SBDSP1-202ENST00000423945 DLG5Q8TDM6 1919 aa23.81■■□□□ 1.4
SBDSP1-202ENST00000423945 CRKLP46109 303 aaKnown RBP23.81■■□□□ 1.4
SBDSP1-202ENST00000423945 DNAJC10Q8IXB1 793 aa23.81■■□□□ 1.4
SBDSP1-202ENST00000423945 RPS6KA4O75676 772 aa23.8■■□□□ 1.4
SBDSP1-202ENST00000423945 RTCBQ9Y3I0 505 aaKnown RBP23.8■■□□□ 1.4
SBDSP1-202ENST00000423945 PLEKHF1Q96S99 279 aa23.79■■□□□ 1.4
SBDSP1-202ENST00000423945 TEFQ10587 303 aa23.78■■□□□ 1.4
SBDSP1-202ENST00000423945 INTS5Q6P9B9 1019 aaKnown RBP23.78■■□□□ 1.4
SBDSP1-202ENST00000423945 ARHGEF1Q92888 912 aaKnown RBP23.78■■□□□ 1.4
SBDSP1-202ENST00000423945 TRAPPC3LQ5T215 181 aa23.77■■□□□ 1.4
SBDSP1-202ENST00000423945 NLGN2Q8NFZ4 835 aa23.77■■□□□ 1.4
SBDSP1-202ENST00000423945 MYBBP1AQ9BQG0 1328 aaKnown RBP23.77■■□□□ 1.4
SBDSP1-202ENST00000423945 CYP19A1P11511 503 aaPredicted RBP23.76■■□□□ 1.39
SBDSP1-202ENST00000423945 ADRA2BP18089 450 aa23.76■■□□□ 1.39
SBDSP1-202ENST00000423945 KLHL34Q8N239 644 aa23.76■■□□□ 1.39
SBDSP1-202ENST00000423945 DCTN1Q14203 1278 aa23.75■■□□□ 1.39
SBDSP1-202ENST00000423945 ZNF790Q6PG37 636 aa23.75■■□□□ 1.39
SBDSP1-202ENST00000423945 MCM10Q7L590 875 aa23.75■■□□□ 1.39
SBDSP1-202ENST00000423945 ZNF496Q96IT1 587 aaPredicted RBP23.75■■□□□ 1.39
SBDSP1-202ENST00000423945 KCNQ3O43525 872 aa23.74■■□□□ 1.39
SBDSP1-202ENST00000423945 VSIG10Q8N0Z9 540 aa23.74■■□□□ 1.39
SBDSP1-202ENST00000423945 DCAF8L1A6NGE4 600 aa23.73■■□□□ 1.39
SBDSP1-202ENST00000423945 CCDC87Q9NVE4 849 aa23.73■■□□□ 1.39
SBDSP1-202ENST00000423945 UTRNP46939 3433 aa23.73■■□□□ 1.39
SBDSP1-202ENST00000423945 GYS1P13807 737 aa23.72■■□□□ 1.39
SBDSP1-202ENST00000423945 TTC5Q8N0Z6 440 aa23.72■■□□□ 1.39
SBDSP1-202ENST00000423945 HEG1Q9ULI3 1381 aa23.72■■□□□ 1.39
SBDSP1-202ENST00000423945 HTATSF1O43719 755 aaKnown RBP23.71■■□□□ 1.39
SBDSP1-202ENST00000423945 PRKRIP1Q9H875 184 aaPredicted RBP23.71■■□□□ 1.39
SBDSP1-202ENST00000423945 SOS1Q07889 1333 aaPredicted RBP23.7■■□□□ 1.38
SBDSP1-202ENST00000423945 SRP68Q9UHB9 627 aaKnown RBP23.7■■□□□ 1.38
SBDSP1-202ENST00000423945 ZBTB1Q9Y2K1 713 aa23.7■■□□□ 1.38
SBDSP1-202ENST00000423945 GOLGB1Q14789 3259 aaKnown RBP23.69■■□□□ 1.38
SBDSP1-202ENST00000423945 BTBD11A6QL63 1104 aa23.69■■□□□ 1.38
SBDSP1-202ENST00000423945 MMP10P09238 476 aa23.69■■□□□ 1.38
SBDSP1-202ENST00000423945 YY1P25490 414 aa23.69■■□□□ 1.38
SBDSP1-202ENST00000423945 RFC4P35249 363 aa23.69■■□□□ 1.38
SBDSP1-202ENST00000423945 RTF1Q92541 710 aaKnown RBP23.69■■□□□ 1.38
SBDSP1-202ENST00000423945 USP42Q9H9J4 1324 aaKnown RBP23.68■■□□□ 1.38
SBDSP1-202ENST00000423945 NFE2L2Q16236 605 aa23.68■■□□□ 1.38
SBDSP1-202ENST00000423945 CD2APQ9Y5K6 639 aa23.68■■□□□ 1.38
SBDSP1-202ENST00000423945 KIF13BQ9NQT8 1826 aa23.68■■□□□ 1.38
SBDSP1-202ENST00000423945 NLGN1Q8N2Q7 840 aa23.67■■□□□ 1.38
SBDSP1-202ENST00000423945 KIAA1551Q9HCM1 1747 aa23.67■■□□□ 1.38
SBDSP1-202ENST00000423945 COL15A1P39059 1388 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms