RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 SLC4A9Q96Q91 983 aa15.54■□□□□ 0.08
NCDN-204ENST00000423723 ITPK1Q13572 414 aa15.53■□□□□ 0.08
NCDN-204ENST00000423723 COL23A1Q86Y22 540 aaPredicted RBP15.53■□□□□ 0.08
NCDN-204ENST00000423723 NFATC2IPQ8NCF5 419 aa15.53■□□□□ 0.08
NCDN-204ENST00000423723 CFAP53Q96M91 514 aa15.53■□□□□ 0.08
NCDN-204ENST00000423723 ATF5Q9Y2D1 282 aaPredicted RBP15.53■□□□□ 0.08
NCDN-204ENST00000423723 ZNF831Q5JPB2 1677 aa15.53■□□□□ 0.08
NCDN-204ENST00000423723 TAF1LQ8IZX4 1826 aa15.52■□□□□ 0.08
NCDN-204ENST00000423723 ADAMTS7Q9UKP4 1686 aa15.52■□□□□ 0.08
NCDN-204ENST00000423723 RNMTO43148 476 aaKnown RBP15.52■□□□□ 0.08
NCDN-204ENST00000423723 FCHSD2O94868 740 aa15.52■□□□□ 0.08
NCDN-204ENST00000423723 CABP4P57796 275 aa15.52■□□□□ 0.08
NCDN-204ENST00000423723 RC3H1Q5TC82 1133 aaKnown RBP15.52■□□□□ 0.08
NCDN-204ENST00000423723 RSPH6AQ9H0K4 717 aa15.52■□□□□ 0.08
NCDN-204ENST00000423723 LGR6Q9HBX8 967 aa15.52■□□□□ 0.08
NCDN-204ENST00000423723 MAP3K5Q99683 1374 aa15.51■□□□□ 0.07
NCDN-204ENST00000423723 LINC00116Q8NCU8 138 aa15.51■□□□□ 0.07
NCDN-204ENST00000423723 SLC52A2Q9HAB3 445 aa15.51■□□□□ 0.07
NCDN-204ENST00000423723 NUDCQ9Y266 331 aa15.51■□□□□ 0.07
NCDN-204ENST00000423723 ATP6V1AP38606 617 aa15.5■□□□□ 0.07
NCDN-204ENST00000423723 MRC1P22897 1456 aa15.5■□□□□ 0.07
NCDN-204ENST00000423723 C5P01031 1676 aa15.49■□□□□ 0.07
NCDN-204ENST00000423723 U2SURPO15042 1029 aaKnown RBP15.49■□□□□ 0.07
NCDN-204ENST00000423723 SSFA2P28290 1259 aa15.49■□□□□ 0.07
NCDN-204ENST00000423723 AMIGO3Q86WK7 504 aa15.49■□□□□ 0.07
NCDN-204ENST00000423723 IL17REQ8NFR9 667 aa15.49■□□□□ 0.07
NCDN-204ENST00000423723 GAS2L2Q8NHY3 880 aa15.49■□□□□ 0.07
NCDN-204ENST00000423723 PHACTR3Q96KR7 559 aa15.49■□□□□ 0.07
NCDN-204ENST00000423723 TUBGCP6Q96RT7 1819 aa15.49■□□□□ 0.07
NCDN-204ENST00000423723 SCN11AQ9UI33 1791 aa15.49■□□□□ 0.07
NCDN-204ENST00000423723 CNGB1Q14028 1251 aaPredicted RBP15.48■□□□□ 0.07
NCDN-204ENST00000423723 RALBP1Q15311 655 aa15.48■□□□□ 0.07
NCDN-204ENST00000423723 ARXQ96QS3 562 aa15.48■□□□□ 0.07
NCDN-204ENST00000423723 SYT17Q9BSW7 474 aa15.48■□□□□ 0.07
NCDN-204ENST00000423723 C4BP0C0L5 1744 aa15.48■□□□□ 0.07
NCDN-204ENST00000423723 CEMIPQ8WUJ3 1361 aa15.48■□□□□ 0.07
NCDN-204ENST00000423723 CNTNAP4Q9C0A0 1308 aa15.47■□□□□ 0.07
NCDN-204ENST00000423723 PPP1R1BQ9UD71 204 aaPredicted RBP15.47■□□□□ 0.07
NCDN-204ENST00000423723 UTRNP46939 3433 aa15.46■□□□□ 0.07
NCDN-204ENST00000423723 GNAT3A8MTJ3 354 aa15.46■□□□□ 0.07
NCDN-204ENST00000423723 PRKAR2BP31323 418 aa15.46■□□□□ 0.07
NCDN-204ENST00000423723 AK7Q96M32 723 aa15.46■□□□□ 0.07
NCDN-204ENST00000423723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.45■□□□□ 0.06
NCDN-204ENST00000423723 RPS6KA4O75676 772 aa15.45■□□□□ 0.06
NCDN-204ENST00000423723 VSIG10Q8N0Z9 540 aa15.45■□□□□ 0.06
NCDN-204ENST00000423723 FHDC1Q9C0D6 1143 aaPredicted RBP15.45■□□□□ 0.06
NCDN-204ENST00000423723 UBR3Q6ZT12 1888 aa15.45■□□□□ 0.06
NCDN-204ENST00000423723 CICQ96RK0 1608 aaPredicted RBP15.45■□□□□ 0.06
NCDN-204ENST00000423723 HTATSF1O43719 755 aaKnown RBP15.44■□□□□ 0.06
NCDN-204ENST00000423723 U2AF1L5P0DN76 240 aaPredicted RBP15.44■□□□□ 0.06
NCDN-204ENST00000423723 ADRA2BP18089 450 aa15.44■□□□□ 0.06
NCDN-204ENST00000423723 U2AF1Q01081 240 aaKnown RBP eCLIP15.44■□□□□ 0.06
NCDN-204ENST00000423723 PLEKHF1Q96S99 279 aa15.44■□□□□ 0.06
NCDN-204ENST00000423723 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
NCDN-204ENST00000423723 POLD1P28340 1107 aa15.43■□□□□ 0.06
NCDN-204ENST00000423723 PTCD1O75127 700 aaKnown RBP15.42■□□□□ 0.06
NCDN-204ENST00000423723 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
NCDN-204ENST00000423723 GNPATO15228 680 aa15.41■□□□□ 0.06
NCDN-204ENST00000423723 INTS5Q6P9B9 1019 aaKnown RBP15.41■□□□□ 0.06
NCDN-204ENST00000423723 RTCBQ9Y3I0 505 aaKnown RBP15.41■□□□□ 0.06
NCDN-204ENST00000423723 COL5A3P25940 1745 aaPredicted RBP15.4■□□□□ 0.06
NCDN-204ENST00000423723 KCPQ6ZWJ8 1503 aa15.4■□□□□ 0.06
NCDN-204ENST00000423723 CYP19A1P11511 503 aaPredicted RBP15.4■□□□□ 0.06
NCDN-204ENST00000423723 CRKLP46109 303 aaKnown RBP15.4■□□□□ 0.06
NCDN-204ENST00000423723 SLC39A6Q13433 755 aa15.4■□□□□ 0.06
NCDN-204ENST00000423723 TRAPPC3LQ5T215 181 aa15.4■□□□□ 0.06
NCDN-204ENST00000423723 SMIM5Q71RC9 77 aa15.4■□□□□ 0.06
NCDN-204ENST00000423723 ARHGEF1Q92888 912 aaKnown RBP15.4■□□□□ 0.06
NCDN-204ENST00000423723 ZNF790Q6PG37 636 aa15.39■□□□□ 0.05
NCDN-204ENST00000423723 GOLGB1Q14789 3259 aaKnown RBP15.39■□□□□ 0.05
NCDN-204ENST00000423723 MYBBP1AQ9BQG0 1328 aaKnown RBP15.39■□□□□ 0.05
NCDN-204ENST00000423723 TEFQ10587 303 aa15.38■□□□□ 0.05
NCDN-204ENST00000423723 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
NCDN-204ENST00000423723 PRKRIP1Q9H875 184 aaPredicted RBP15.38■□□□□ 0.05
NCDN-204ENST00000423723 CD2APQ9Y5K6 639 aa15.38■□□□□ 0.05
NCDN-204ENST00000423723 MSH5O43196 834 aa15.37■□□□□ 0.05
NCDN-204ENST00000423723 DNAJC10Q8IXB1 793 aa15.37■□□□□ 0.05
NCDN-204ENST00000423723 NLGN1Q8N2Q7 840 aa15.37■□□□□ 0.05
NCDN-204ENST00000423723 PNNQ9H307 717 aaKnown RBP15.37■□□□□ 0.05
NCDN-204ENST00000423723 VIRMAQ69YN4 1812 aaKnown RBP15.36■□□□□ 0.05
NCDN-204ENST00000423723 PHF14O94880 888 aa15.36■□□□□ 0.05
NCDN-204ENST00000423723 GYS1P13807 737 aa15.36■□□□□ 0.05
NCDN-204ENST00000423723 ZNF496Q96IT1 587 aaPredicted RBP15.36■□□□□ 0.05
NCDN-204ENST00000423723 TEX13AQ9BXU3 409 aaPredicted RBP15.36■□□□□ 0.05
NCDN-204ENST00000423723 TJP1Q07157 1748 aa15.36■□□□□ 0.05
NCDN-204ENST00000423723 SIPA1L3O60292 1781 aaPredicted RBP15.36■□□□□ 0.05
NCDN-204ENST00000423723 UBR2Q8IWV8 1755 aa15.36■□□□□ 0.05
NCDN-204ENST00000423723 MSL1Q68DK7 614 aa15.35■□□□□ 0.05
NCDN-204ENST00000423723 CCDC87Q9NVE4 849 aa15.35■□□□□ 0.05
NCDN-204ENST00000423723 HEG1Q9ULI3 1381 aa15.35■□□□□ 0.05
NCDN-204ENST00000423723 NFE2L2Q16236 605 aa15.34■□□□□ 0.05
NCDN-204ENST00000423723 RTF1Q92541 710 aaKnown RBP15.34■□□□□ 0.05
NCDN-204ENST00000423723 SOS1Q07889 1333 aaPredicted RBP15.34■□□□□ 0.05
NCDN-204ENST00000423723 BTBD11A6QL63 1104 aa15.33■□□□□ 0.04
NCDN-204ENST00000423723 RFC4P35249 363 aa15.33■□□□□ 0.04
NCDN-204ENST00000423723 EIF5P55010 431 aaKnown RBP15.33■□□□□ 0.04
NCDN-204ENST00000423723 TAF7Q15545 349 aaPredicted RBP15.33■□□□□ 0.04
NCDN-204ENST00000423723 TTC5Q8N0Z6 440 aa15.33■□□□□ 0.04
NCDN-204ENST00000423723 FMNL2Q96PY5 1086 aa15.33■□□□□ 0.04
NCDN-204ENST00000423723 DCAF8L1A6NGE4 600 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms