RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 NFATC2IPQ8NCF5 419 aa19.76■□□□□ 0.75
FAM3A-209ENST00000421517 PNNQ9H307 717 aaKnown RBP19.76■□□□□ 0.75
FAM3A-209ENST00000421517 PNPLA7Q6ZV29 1317 aa19.76■□□□□ 0.75
FAM3A-209ENST00000421517 TAF1LQ8IZX4 1826 aa19.75■□□□□ 0.75
FAM3A-209ENST00000421517 GNAT3A8MTJ3 354 aa19.75■□□□□ 0.75
FAM3A-209ENST00000421517 U2AF1L5P0DN76 240 aaPredicted RBP19.75■□□□□ 0.75
FAM3A-209ENST00000421517 U2AF1Q01081 240 aaKnown RBP eCLIP19.75■□□□□ 0.75
FAM3A-209ENST00000421517 CICQ96RK0 1608 aaPredicted RBP19.75■□□□□ 0.75
FAM3A-209ENST00000421517 MYBBP1AQ9BQG0 1328 aaKnown RBP19.75■□□□□ 0.75
FAM3A-209ENST00000421517 MAP3K5Q99683 1374 aa19.74■□□□□ 0.75
FAM3A-209ENST00000421517 HTATSF1O43719 755 aaKnown RBP19.74■□□□□ 0.75
FAM3A-209ENST00000421517 PRKAR2BP31323 418 aa19.74■□□□□ 0.75
FAM3A-209ENST00000421517 SGIP1Q9BQI5 828 aa19.74■□□□□ 0.75
FAM3A-209ENST00000421517 C4BP0C0L5 1744 aa19.73■□□□□ 0.75
FAM3A-209ENST00000421517 ATP6V1AP38606 617 aa19.73■□□□□ 0.75
FAM3A-209ENST00000421517 PTGER2P43116 358 aa19.73■□□□□ 0.75
FAM3A-209ENST00000421517 RC3H1Q5TC82 1133 aaKnown RBP19.73■□□□□ 0.75
FAM3A-209ENST00000421517 PDGFDQ9GZP0 370 aaPredicted RBP19.73■□□□□ 0.75
FAM3A-209ENST00000421517 LGR6Q9HBX8 967 aa19.73■□□□□ 0.75
FAM3A-209ENST00000421517 COL24A1Q17RW2 1714 aa19.73■□□□□ 0.75
FAM3A-209ENST00000421517 CEMIPQ8WUJ3 1361 aa19.72■□□□□ 0.75
FAM3A-209ENST00000421517 SSFA2P28290 1259 aa19.72■□□□□ 0.75
FAM3A-209ENST00000421517 KCNQ4P56696 695 aa19.72■□□□□ 0.75
FAM3A-209ENST00000421517 VSIG10Q8N0Z9 540 aa19.7■□□□□ 0.74
FAM3A-209ENST00000421517 PHACTR3Q96KR7 559 aa19.7■□□□□ 0.74
FAM3A-209ENST00000421517 AK7Q96M32 723 aa19.7■□□□□ 0.74
FAM3A-209ENST00000421517 PRKRIP1Q9H875 184 aaPredicted RBP19.7■□□□□ 0.74
FAM3A-209ENST00000421517 CNTNAP4Q9C0A0 1308 aa19.7■□□□□ 0.74
FAM3A-209ENST00000421517 ZBTB7AO95365 584 aa19.69■□□□□ 0.74
FAM3A-209ENST00000421517 NEFMP07197 916 aa19.69■□□□□ 0.74
FAM3A-209ENST00000421517 ITPK1Q13572 414 aa19.69■□□□□ 0.74
FAM3A-209ENST00000421517 LINC00116Q8NCU8 138 aa19.69■□□□□ 0.74
FAM3A-209ENST00000421517 SLC4A9Q96Q91 983 aa19.69■□□□□ 0.74
FAM3A-209ENST00000421517 ZNF316A6NFI3 1004 aaPredicted RBP19.68■□□□□ 0.74
FAM3A-209ENST00000421517 ADRA2BP18089 450 aa19.68■□□□□ 0.74
FAM3A-209ENST00000421517 COL23A1Q86Y22 540 aaPredicted RBP19.68■□□□□ 0.74
FAM3A-209ENST00000421517 IL17REQ8NFR9 667 aa19.68■□□□□ 0.74
FAM3A-209ENST00000421517 PLEKHF1Q96S99 279 aa19.68■□□□□ 0.74
FAM3A-209ENST00000421517 TUBGCP6Q96RT7 1819 aa19.67■□□□□ 0.74
FAM3A-209ENST00000421517 PPP1R1BQ9UD71 204 aaPredicted RBP19.67■□□□□ 0.74
FAM3A-209ENST00000421517 TEFQ10587 303 aa19.66■□□□□ 0.74
FAM3A-209ENST00000421517 RBM42Q9BTD8 480 aaKnown RBP19.66■□□□□ 0.74
FAM3A-209ENST00000421517 COL5A3P25940 1745 aaPredicted RBP19.65■□□□□ 0.74
FAM3A-209ENST00000421517 POLD1P28340 1107 aa19.65■□□□□ 0.74
FAM3A-209ENST00000421517 ATF5Q9Y2D1 282 aaPredicted RBP19.65■□□□□ 0.74
FAM3A-209ENST00000421517 UBR3Q6ZT12 1888 aa19.65■□□□□ 0.74
FAM3A-209ENST00000421517 RTF1Q92541 710 aaKnown RBP19.64■□□□□ 0.73
FAM3A-209ENST00000421517 RTCBQ9Y3I0 505 aaKnown RBP19.64■□□□□ 0.73
FAM3A-209ENST00000421517 VIRMAQ69YN4 1812 aaKnown RBP19.63■□□□□ 0.73
FAM3A-209ENST00000421517 KCPQ6ZWJ8 1503 aa19.63■□□□□ 0.73
FAM3A-209ENST00000421517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.63■□□□□ 0.73
FAM3A-209ENST00000421517 RPS6KA4O75676 772 aa19.63■□□□□ 0.73
FAM3A-209ENST00000421517 ARXQ96QS3 562 aa19.63■□□□□ 0.73
FAM3A-209ENST00000421517 TEX13AQ9BXU3 409 aaPredicted RBP19.63■□□□□ 0.73
FAM3A-209ENST00000421517 SIPA1L3O60292 1781 aaPredicted RBP19.62■□□□□ 0.73
FAM3A-209ENST00000421517 PTCD1O75127 700 aaKnown RBP19.62■□□□□ 0.73
FAM3A-209ENST00000421517 ZNF790Q6PG37 636 aa19.62■□□□□ 0.73
FAM3A-209ENST00000421517 TTC5Q8N0Z6 440 aa19.62■□□□□ 0.73
FAM3A-209ENST00000421517 UBR2Q8IWV8 1755 aa19.62■□□□□ 0.73
FAM3A-209ENST00000421517 GNPATO15228 680 aa19.61■□□□□ 0.73
FAM3A-209ENST00000421517 NFE2L2Q16236 605 aa19.6■□□□□ 0.73
FAM3A-209ENST00000421517 TRAPPC3LQ5T215 181 aa19.6■□□□□ 0.73
FAM3A-209ENST00000421517 TJP1Q07157 1748 aa19.59■□□□□ 0.73
FAM3A-209ENST00000421517 MAPK8IP3Q9UPT6 1336 aa19.59■□□□□ 0.73
FAM3A-209ENST00000421517 CRKLP46109 303 aaKnown RBP19.58■□□□□ 0.72
FAM3A-209ENST00000421517 SLC39A6Q13433 755 aa19.58■□□□□ 0.72
FAM3A-209ENST00000421517 AMIGO3Q86WK7 504 aa19.58■□□□□ 0.72
FAM3A-209ENST00000421517 HEG1Q9ULI3 1381 aa19.57■□□□□ 0.72
FAM3A-209ENST00000421517 BTBD11A6QL63 1104 aa19.57■□□□□ 0.72
FAM3A-209ENST00000421517 MSH5O43196 834 aa19.57■□□□□ 0.72
FAM3A-209ENST00000421517 CYP19A1P11511 503 aaPredicted RBP19.57■□□□□ 0.72
FAM3A-209ENST00000421517 PNISRQ8TF01 805 aaKnown RBP19.57■□□□□ 0.72
FAM3A-209ENST00000421517 FMNL2Q96PY5 1086 aa19.57■□□□□ 0.72
FAM3A-209ENST00000421517 SYT17Q9BSW7 474 aa19.57■□□□□ 0.72
FAM3A-209ENST00000421517 STARD3NLO95772 234 aa19.56■□□□□ 0.72
FAM3A-209ENST00000421517 TAF7Q15545 349 aaPredicted RBP19.56■□□□□ 0.72
FAM3A-209ENST00000421517 INTS5Q6P9B9 1019 aaKnown RBP19.56■□□□□ 0.72
FAM3A-209ENST00000421517 NLGN1Q8N2Q7 840 aa19.56■□□□□ 0.72
FAM3A-209ENST00000421517 FHDC1Q9C0D6 1143 aaPredicted RBP19.56■□□□□ 0.72
FAM3A-209ENST00000421517 CCDC87Q9NVE4 849 aa19.56■□□□□ 0.72
FAM3A-209ENST00000421517 WDR43Q15061 677 aaKnown RBP eCLIP19.55■□□□□ 0.72
FAM3A-209ENST00000421517 DNAJC10Q8IXB1 793 aa19.55■□□□□ 0.72
FAM3A-209ENST00000421517 ARHGEF1Q92888 912 aaKnown RBP19.55■□□□□ 0.72
FAM3A-209ENST00000421517 ZNF496Q96IT1 587 aaPredicted RBP19.55■□□□□ 0.72
FAM3A-209ENST00000421517 BABAM1Q9NWV8 329 aa19.55■□□□□ 0.72
FAM3A-209ENST00000421517 PHF14O94880 888 aa19.54■□□□□ 0.72
FAM3A-209ENST00000421517 LMOD3Q0VAK6 560 aa19.54■□□□□ 0.72
FAM3A-209ENST00000421517 MCM10Q7L590 875 aa19.54■□□□□ 0.72
FAM3A-209ENST00000421517 RFC4P35249 363 aa19.53■□□□□ 0.72
FAM3A-209ENST00000421517 RUNDC1Q96C34 613 aa19.53■□□□□ 0.72
FAM3A-209ENST00000421517 CD2APQ9Y5K6 639 aa19.53■□□□□ 0.72
FAM3A-209ENST00000421517 MYH14Q7Z406 1995 aaKnown RBP19.53■□□□□ 0.72
FAM3A-209ENST00000421517 SOS1Q07889 1333 aaPredicted RBP19.52■□□□□ 0.72
FAM3A-209ENST00000421517 DCAF8L1A6NGE4 600 aa19.52■□□□□ 0.72
FAM3A-209ENST00000421517 TMPOP42166 694 aaKnown RBP19.51■□□□□ 0.71
FAM3A-209ENST00000421517 ADAMTS8Q9UP79 889 aa19.51■□□□□ 0.71
FAM3A-209ENST00000421517 GYS1P13807 737 aa19.5■□□□□ 0.71
FAM3A-209ENST00000421517 USP42Q9H9J4 1324 aaKnown RBP19.5■□□□□ 0.71
FAM3A-209ENST00000421517 A0A087WZG4 1122 aa19.49■□□□□ 0.71
FAM3A-209ENST00000421517 SNRPA1P09661 255 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms