RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 FTSJ3Q8IY81 847 aaKnown RBP17.08■□□□□ 0.33
TMEM50B-201ENST00000420455 EIF4A1P60842 406 aaKnown RBP17.08■□□□□ 0.32
TMEM50B-201ENST00000420455 TOM1O60784 492 aa17.07■□□□□ 0.32
TMEM50B-201ENST00000420455 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
TMEM50B-201ENST00000420455 TMEM57Q8N5G2 664 aa17.07■□□□□ 0.32
TMEM50B-201ENST00000420455 PAPPAQ13219 1627 aa17.07■□□□□ 0.32
TMEM50B-201ENST00000420455 DISP2A7MBM2 1401 aa17.07■□□□□ 0.32
TMEM50B-201ENST00000420455 API5Q9BZZ5 524 aaKnown RBP17.07■□□□□ 0.32
TMEM50B-201ENST00000420455 NWD2Q9ULI1 1742 aa17.06■□□□□ 0.32
TMEM50B-201ENST00000420455 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
TMEM50B-201ENST00000420455 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
TMEM50B-201ENST00000420455 CYP27B1O15528 508 aa17.06■□□□□ 0.32
TMEM50B-201ENST00000420455 GLI3P10071 1580 aa17.06■□□□□ 0.32
TMEM50B-201ENST00000420455 NKX1-1Q15270 411 aaPredicted RBP17.05■□□□□ 0.32
TMEM50B-201ENST00000420455 IGHDP01880 384 aa17.05■□□□□ 0.32
TMEM50B-201ENST00000420455 PCDHB15Q9Y5E8 787 aa17.05■□□□□ 0.32
TMEM50B-201ENST00000420455 UBR2Q8IWV8 1755 aa17.04■□□□□ 0.32
TMEM50B-201ENST00000420455 TCERG1O14776 1098 aaKnown RBP17.04■□□□□ 0.32
TMEM50B-201ENST00000420455 INTS3Q68E01 1043 aaKnown RBP17.04■□□□□ 0.32
TMEM50B-201ENST00000420455 DCAF5Q96JK2 942 aa17.04■□□□□ 0.32
TMEM50B-201ENST00000420455 TEFQ10587 303 aa17.04■□□□□ 0.32
TMEM50B-201ENST00000420455 SLC52A2Q9HAB3 445 aa17.04■□□□□ 0.32
TMEM50B-201ENST00000420455 BTBD11A6QL63 1104 aa17.03■□□□□ 0.32
TMEM50B-201ENST00000420455 ZBTB7BO15156 539 aaPredicted RBP17.03■□□□□ 0.32
TMEM50B-201ENST00000420455 HSP90AB1P08238 724 aaKnown RBP17.03■□□□□ 0.32
TMEM50B-201ENST00000420455 LARP1Q6PKG0 1096 aaKnown RBP17.03■□□□□ 0.32
TMEM50B-201ENST00000420455 TOM1L2Q6ZVM7 507 aa17.03■□□□□ 0.32
TMEM50B-201ENST00000420455 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
TMEM50B-201ENST00000420455 C5P01031 1676 aa17.02■□□□□ 0.32
TMEM50B-201ENST00000420455 PXDNLA1KZ92 1463 aa17.02■□□□□ 0.32
TMEM50B-201ENST00000420455 PCDH11XQ9BZA7 1347 aa17.02■□□□□ 0.32
TMEM50B-201ENST00000420455 PCDH11YQ9BZA8 1340 aa17.02■□□□□ 0.32
TMEM50B-201ENST00000420455 TOGARAM1Q9Y4F4 1720 aa17.02■□□□□ 0.31
TMEM50B-201ENST00000420455 IL2RBP14784 551 aa17.02■□□□□ 0.31
TMEM50B-201ENST00000420455 MSH5O43196 834 aa17.01■□□□□ 0.31
TMEM50B-201ENST00000420455 SLC4A2P04920 1241 aa17.01■□□□□ 0.31
TMEM50B-201ENST00000420455 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
TMEM50B-201ENST00000420455 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
TMEM50B-201ENST00000420455 LRP6O75581 1613 aa17.01■□□□□ 0.31
TMEM50B-201ENST00000420455 HDAC1Q13547 482 aaPredicted RBP17.01■□□□□ 0.31
TMEM50B-201ENST00000420455 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
TMEM50B-201ENST00000420455 KCNQ3O43525 872 aa17■□□□□ 0.31
TMEM50B-201ENST00000420455 BTG4Q9NY30 223 aa17■□□□□ 0.31
TMEM50B-201ENST00000420455 ZCRB1Q8TBF4 217 aaKnown RBP17■□□□□ 0.31
TMEM50B-201ENST00000420455 SLIT2O94813 1529 aa17■□□□□ 0.31
TMEM50B-201ENST00000420455 LAMB4A4D0S4 1761 aa16.99■□□□□ 0.31
TMEM50B-201ENST00000420455 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
TMEM50B-201ENST00000420455 EVA1CP58658 441 aa16.98■□□□□ 0.31
TMEM50B-201ENST00000420455 G2E3Q7L622 706 aa16.98■□□□□ 0.31
TMEM50B-201ENST00000420455 STK31Q9BXU1 1019 aa16.97■□□□□ 0.31
TMEM50B-201ENST00000420455 ERVV-2B6SEH9 535 aa16.97■□□□□ 0.31
TMEM50B-201ENST00000420455 ZNF790Q6PG37 636 aa16.97■□□□□ 0.31
TMEM50B-201ENST00000420455 PDE4AP27815 886 aa16.96■□□□□ 0.31
TMEM50B-201ENST00000420455 BACH2Q9BYV9 841 aa16.96■□□□□ 0.31
TMEM50B-201ENST00000420455 RWDD1Q9H446 243 aaPredicted RBP16.96■□□□□ 0.31
TMEM50B-201ENST00000420455 STRN4Q9NRL3 753 aa16.96■□□□□ 0.31
TMEM50B-201ENST00000420455 FLIIQ13045 1269 aa16.95■□□□□ 0.3
TMEM50B-201ENST00000420455 TNS2Q63HR2 1409 aa16.95■□□□□ 0.3
TMEM50B-201ENST00000420455 KCPQ6ZWJ8 1503 aa16.95■□□□□ 0.3
TMEM50B-201ENST00000420455 HDGFL1Q5TGJ6 251 aa16.95■□□□□ 0.3
TMEM50B-201ENST00000420455 NFATC2IPQ8NCF5 419 aa16.95■□□□□ 0.3
TMEM50B-201ENST00000420455 UBAP1LF5GYI3 381 aa16.93■□□□□ 0.3
TMEM50B-201ENST00000420455 THRAP3Q9Y2W1 955 aaKnown RBP16.93■□□□□ 0.3
TMEM50B-201ENST00000420455 IBTKQ9P2D0 1353 aaPredicted RBP16.93■□□□□ 0.3
TMEM50B-201ENST00000420455 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.93■□□□□ 0.3
TMEM50B-201ENST00000420455 CCT4P50991 539 aaKnown RBP16.93■□□□□ 0.3
TMEM50B-201ENST00000420455 JCADQ9P266 1359 aa16.93■□□□□ 0.3
TMEM50B-201ENST00000420455 ITGB4P16144 1822 aa16.93■□□□□ 0.3
TMEM50B-201ENST00000420455 PIP4K2BP78356 416 aa16.92■□□□□ 0.3
TMEM50B-201ENST00000420455 SMC5Q8IY18 1101 aa16.92■□□□□ 0.3
TMEM50B-201ENST00000420455 ATP10DQ9P241 1426 aa16.92■□□□□ 0.3
TMEM50B-201ENST00000420455 CERKQ8TCT0 537 aa16.92■□□□□ 0.3
TMEM50B-201ENST00000420455 SPATA31A1Q5TZJ5 1347 aa16.91■□□□□ 0.3
TMEM50B-201ENST00000420455 DBF4Q9UBU7 674 aaPredicted RBP16.91■□□□□ 0.3
TMEM50B-201ENST00000420455 PDIA6Q15084 440 aa16.9■□□□□ 0.3
TMEM50B-201ENST00000420455 CHPF2Q9P2E5 772 aa16.9■□□□□ 0.3
TMEM50B-201ENST00000420455 CDCA7Q9BWT1 371 aaPredicted RBP16.9■□□□□ 0.3
TMEM50B-201ENST00000420455 CABP4P57796 275 aa16.9■□□□□ 0.3
TMEM50B-201ENST00000420455 SIRT2Q8IXJ6 389 aa16.9■□□□□ 0.3
TMEM50B-201ENST00000420455 SPATA31A5Q5VU36 1347 aa16.89■□□□□ 0.29
TMEM50B-201ENST00000420455 SPATA31A7Q8IWB4 1347 aa16.89■□□□□ 0.29
TMEM50B-201ENST00000420455 PHAXQ9H814 394 aaKnown RBP16.89■□□□□ 0.29
TMEM50B-201ENST00000420455 SLC39A6Q13433 755 aa16.88■□□□□ 0.29
TMEM50B-201ENST00000420455 C8orf34Q49A92 452 aa16.88■□□□□ 0.29
TMEM50B-201ENST00000420455 LRP10Q7Z4F1 713 aa16.88■□□□□ 0.29
TMEM50B-201ENST00000420455 PRAMEF22A3QJZ6 481 aa16.88■□□□□ 0.29
TMEM50B-201ENST00000420455 ZNF496Q96IT1 587 aaPredicted RBP16.88■□□□□ 0.29
TMEM50B-201ENST00000420455 ADCY9O60503 1353 aa16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 RGS3P49796 1198 aa16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 BARGINQ6ZT62 677 aa16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 NECTIN2Q92692 538 aa16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 FMNL2Q96PY5 1086 aa16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 DDX21Q9NR30 783 aaKnown RBP eCLIP16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 HYPKQ9NX55 129 aa16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 BCL9LQ86UU0 1499 aa16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 SPATA31A6Q5VVP1 1343 aa16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 F6X3S4 739 aa16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 SNRPA1P09661 255 aaKnown RBP16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 FKBP5Q13451 457 aaPredicted RBP16.87■□□□□ 0.29
TMEM50B-201ENST00000420455 EIF2S2P20042 333 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms