RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 CTDP1Q9Y5B0 961 aaPredicted RBP11.73□□□□□ -0.53
LINC00963-202ENST00000419300 TNPO1Q92973 898 aaKnown RBP11.73□□□□□ -0.53
LINC00963-202ENST00000419300 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
LINC00963-202ENST00000419300 KIF6Q6ZMV9 814 aa11.73□□□□□ -0.53
LINC00963-202ENST00000419300 VPS36Q86VN1 386 aa11.73□□□□□ -0.53
LINC00963-202ENST00000419300 CCDC94Q9BW85 323 aaPredicted RBP11.73□□□□□ -0.53
LINC00963-202ENST00000419300 IL16Q14005 1332 aa11.73□□□□□ -0.53
LINC00963-202ENST00000419300 CCDC158Q5M9N0 1113 aa11.72□□□□□ -0.53
LINC00963-202ENST00000419300 PPP4R3BQ5MIZ7 849 aa11.72□□□□□ -0.53
LINC00963-202ENST00000419300 CROCC2H7BZ55 1655 aa11.72□□□□□ -0.53
LINC00963-202ENST00000419300 INSRP06213 1382 aa11.72□□□□□ -0.53
LINC00963-202ENST00000419300 RBM25P49756 843 aaKnown RBP11.72□□□□□ -0.53
LINC00963-202ENST00000419300 ALS2CR12Q96Q35 445 aa11.72□□□□□ -0.53
LINC00963-202ENST00000419300 CCDC69A6NI79 296 aa11.72□□□□□ -0.53
LINC00963-202ENST00000419300 PRKAR2BP31323 418 aa11.72□□□□□ -0.53
LINC00963-202ENST00000419300 CCDC57Q2TAC2 916 aa11.72□□□□□ -0.53
LINC00963-202ENST00000419300 HMOX1P09601 288 aa11.72□□□□□ -0.53
LINC00963-202ENST00000419300 FOSBP53539 338 aa11.72□□□□□ -0.53
LINC00963-202ENST00000419300 BMS1Q14692 1282 aaKnown RBP11.72□□□□□ -0.53
LINC00963-202ENST00000419300 DESP17661 470 aa11.71□□□□□ -0.53
LINC00963-202ENST00000419300 GCOM1H8Y6P7 765 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-202ENST00000419300 PPP1R12BO60237 982 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-202ENST00000419300 MYZAPP0CAP1 466 aa11.71□□□□□ -0.53
LINC00963-202ENST00000419300 BCAR3O75815 825 aa11.71□□□□□ -0.53
LINC00963-202ENST00000419300 SPA17Q15506 151 aa11.71□□□□□ -0.53
LINC00963-202ENST00000419300 DDX12PQ92771 950 aa11.71□□□□□ -0.53
LINC00963-202ENST00000419300 GIGYF2Q6Y7W6 1299 aaKnown RBP11.71□□□□□ -0.53
LINC00963-202ENST00000419300 DNAAF4Q8WXU2 420 aa11.71□□□□□ -0.53
LINC00963-202ENST00000419300 EXOSC9Q06265 439 aaKnown RBP11.71□□□□□ -0.54
LINC00963-202ENST00000419300 TEX14Q8IWB6 1497 aa11.71□□□□□ -0.54
LINC00963-202ENST00000419300 MX1P20591 662 aa11.71□□□□□ -0.54
LINC00963-202ENST00000419300 CCDC9Q9Y3X0 531 aaKnown RBP11.71□□□□□ -0.54
LINC00963-202ENST00000419300 V9GYY5 206 aaPredicted RBP11.71□□□□□ -0.54
LINC00963-202ENST00000419300 CFAP100Q494V2 611 aa11.71□□□□□ -0.54
LINC00963-202ENST00000419300 NCBP3Q53F19 620 aaKnown RBP11.7□□□□□ -0.54
LINC00963-202ENST00000419300 NAA15Q9BXJ9 866 aaKnown RBP11.7□□□□□ -0.54
LINC00963-202ENST00000419300 NEFHP12036 1026 aa11.7□□□□□ -0.54
LINC00963-202ENST00000419300 NEUROD6Q96NK8 337 aa11.7□□□□□ -0.54
LINC00963-202ENST00000419300 MEX3CQ5U5Q3 659 aaKnown RBP11.7□□□□□ -0.54
LINC00963-202ENST00000419300 KIAA0556O60303 1618 aa11.7□□□□□ -0.54
LINC00963-202ENST00000419300 TAF4BQ92750 862 aa11.7□□□□□ -0.54
LINC00963-202ENST00000419300 TUBBP07437 444 aa11.7□□□□□ -0.54
LINC00963-202ENST00000419300 TBC1D2Q9BYX2 928 aa11.7□□□□□ -0.54
LINC00963-202ENST00000419300 TTC39AQ5SRH9 613 aa11.7□□□□□ -0.54
LINC00963-202ENST00000419300 CENPHQ9H3R5 247 aa11.7□□□□□ -0.54
LINC00963-202ENST00000419300 HMG20BQ9P0W2 317 aa11.7□□□□□ -0.54
LINC00963-202ENST00000419300 PSME1Q06323 249 aa11.69□□□□□ -0.54
LINC00963-202ENST00000419300 TERF1P54274 439 aa11.69□□□□□ -0.54
LINC00963-202ENST00000419300 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-202ENST00000419300 CCDC196A0A1B0GTZ2 297 aa11.69□□□□□ -0.54
LINC00963-202ENST00000419300 ARHGEF11O15085 1522 aa11.69□□□□□ -0.54
LINC00963-202ENST00000419300 KDM5DQ9BY66 1539 aa11.69□□□□□ -0.54
LINC00963-202ENST00000419300 TOP1P11387 765 aaKnown RBP11.69□□□□□ -0.54
LINC00963-202ENST00000419300 SNX21Q969T3 373 aa11.69□□□□□ -0.54
LINC00963-202ENST00000419300 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
LINC00963-202ENST00000419300 LRSAM1Q6UWE0 723 aa11.69□□□□□ -0.54
LINC00963-202ENST00000419300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.69□□□□□ -0.541e-6■■■■■ 93.7
LINC00963-202ENST00000419300 WDR62O43379 1518 aa11.69□□□□□ -0.54
LINC00963-202ENST00000419300 GLRX3O76003 335 aaKnown RBP11.68□□□□□ -0.54
LINC00963-202ENST00000419300 ZSCAN23Q3MJ62 389 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
LINC00963-202ENST00000419300 TAOK3Q9H2K8 898 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 UHRF1BP1Q6BDS2 1440 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 LIMCH1Q9UPQ0 1083 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 BRPF1P55201 1214 aaPredicted RBP11.68□□□□□ -0.54
LINC00963-202ENST00000419300 CEP135Q66GS9 1140 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 BBXQ8WY36 941 aaPredicted RBP11.68□□□□□ -0.54
LINC00963-202ENST00000419300 LRRFIP2Q9Y608 721 aaKnown RBP11.68□□□□□ -0.54
LINC00963-202ENST00000419300 KANK3Q6NY19 840 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 TCOF1Q13428 1488 aaKnown RBP11.68□□□□□ -0.54
LINC00963-202ENST00000419300 ADCY5O95622 1261 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 JAKMIP1Q96N16 626 aaKnown RBP11.68□□□□□ -0.54
LINC00963-202ENST00000419300 KRT18P05783 430 aaKnown RBP11.68□□□□□ -0.54
LINC00963-202ENST00000419300 HDAC1Q13547 482 aaPredicted RBP11.68□□□□□ -0.54
LINC00963-202ENST00000419300 SPECC1LQ69YQ0 1117 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 TNNT1P13805 278 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 FAM114A1Q8IWE2 563 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 ANKS4BQ8N8V4 417 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 RAPGEF4Q8WZA2 1011 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 SNW1Q13573 536 aaKnown RBP11.68□□□□□ -0.54
LINC00963-202ENST00000419300 KIF1BPQ96EK5 621 aa11.68□□□□□ -0.54
LINC00963-202ENST00000419300 CDC42BPBQ9Y5S2 1711 aa11.67□□□□□ -0.54
LINC00963-202ENST00000419300 ANAPC15P60006 121 aa11.67□□□□□ -0.54
LINC00963-202ENST00000419300 FEZ1Q99689 392 aa11.67□□□□□ -0.54
LINC00963-202ENST00000419300 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
LINC00963-202ENST00000419300 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
LINC00963-202ENST00000419300 C16orf45Q96MC5 204 aaPredicted RBP11.67□□□□□ -0.54
LINC00963-202ENST00000419300 CKAP4Q07065 602 aaKnown RBP11.67□□□□□ -0.54
LINC00963-202ENST00000419300 ZSCAN16Q9H4T2 348 aaPredicted RBP11.67□□□□□ -0.54
LINC00963-202ENST00000419300 SPHKAPQ2M3C7 1700 aa11.67□□□□□ -0.54
LINC00963-202ENST00000419300 RTEL1-TNFRSF6BF6WH68 1400 aa11.67□□□□□ -0.54
LINC00963-202ENST00000419300 FKBP15Q5T1M5 1219 aa11.67□□□□□ -0.54
LINC00963-202ENST00000419300 RARSP54136 660 aaKnown RBP11.67□□□□□ -0.54
LINC00963-202ENST00000419300 NFE2L2Q16236 605 aa11.67□□□□□ -0.54
LINC00963-202ENST00000419300 CEBPZQ03701 1054 aaKnown RBP11.67□□□□□ -0.54
LINC00963-202ENST00000419300 AACSQ86V21 672 aa11.67□□□□□ -0.54
LINC00963-202ENST00000419300 C1orf115Q9H7X2 142 aa11.67□□□□□ -0.54
LINC00963-202ENST00000419300 SMC1AQ14683 1233 aaKnown RBP11.66□□□□□ -0.54
LINC00963-202ENST00000419300 SPATA24Q86W54 205 aa11.66□□□□□ -0.54
LINC00963-202ENST00000419300 ZNF644Q9H582 1327 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms