RNA–Protein interactions for RNA: ENST00000419210.1

COPS6-203, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-203ENST00000419210 C9orf131Q5VYM1 1079 aa25.39■■□□□ 1.66
COPS6-203ENST00000419210 C4AP0C0L4 1744 aa25.38■■□□□ 1.65
COPS6-203ENST00000419210 SIN3AQ96ST3 1273 aa25.37■■□□□ 1.65
COPS6-203ENST00000419210 CCDC87Q9NVE4 849 aa25.37■■□□□ 1.65
COPS6-203ENST00000419210 NEUROD1Q13562 356 aa25.36■■□□□ 1.65
COPS6-203ENST00000419210 PUS7Q96PZ0 661 aaKnown RBP25.36■■□□□ 1.65
COPS6-203ENST00000419210 DPEP1P16444 411 aa25.35■■□□□ 1.65
COPS6-203ENST00000419210 ATP6V1AP38606 617 aa25.35■■□□□ 1.65
COPS6-203ENST00000419210 INSRP06213 1382 aa25.34■■□□□ 1.65
COPS6-203ENST00000419210 ITPK1Q13572 414 aa25.33■■□□□ 1.65
COPS6-203ENST00000419210 NLGN1Q8N2Q7 840 aa25.33■■□□□ 1.65
COPS6-203ENST00000419210 TMOD3Q9NYL9 352 aa25.33■■□□□ 1.65
COPS6-203ENST00000419210 FLT4P35916 1363 aa25.32■■□□□ 1.64
COPS6-203ENST00000419210 TMF1P82094 1093 aa25.32■■□□□ 1.64
COPS6-203ENST00000419210 SMC1BQ8NDV3 1235 aa25.32■■□□□ 1.64
COPS6-203ENST00000419210 RRAGCQ9HB90 399 aa25.32■■□□□ 1.64
COPS6-203ENST00000419210 RNF181Q9P0P0 153 aa25.32■■□□□ 1.64
COPS6-203ENST00000419210 HSPA1AP0DMV8 641 aaKnown RBP25.31■■□□□ 1.64
COPS6-203ENST00000419210 HSPA1BP0DMV9 641 aaKnown RBP25.31■■□□□ 1.64
COPS6-203ENST00000419210 HSP90AB2PQ58FF8 381 aa25.31■■□□□ 1.64
COPS6-203ENST00000419210 RTCBQ9Y3I0 505 aaKnown RBP25.31■■□□□ 1.64
COPS6-203ENST00000419210 PCNTO95613 3336 aa25.31■■□□□ 1.64
COPS6-203ENST00000419210 KIF20BQ96Q89 1820 aa25.3■■□□□ 1.64
COPS6-203ENST00000419210 TRAPPC3LQ5T215 181 aa25.3■■□□□ 1.64
COPS6-203ENST00000419210 PARP3Q9Y6F1 533 aa25.3■■□□□ 1.64
COPS6-203ENST00000419210 GGNBP2Q9H3C7 697 aa25.29■■□□□ 1.64
COPS6-203ENST00000419210 ASAP1Q9ULH1 1129 aa25.29■■□□□ 1.64
COPS6-203ENST00000419210 NKX1-1Q15270 411 aaPredicted RBP25.28■■□□□ 1.64
COPS6-203ENST00000419210 SPG7Q9UQ90 795 aa25.28■■□□□ 1.64
COPS6-203ENST00000419210 PIM2Q9P1W9 311 aa25.27■■□□□ 1.64
COPS6-203ENST00000419210 KIF24Q5T7B8 1368 aa25.26■■□□□ 1.63
COPS6-203ENST00000419210 DCAF5Q96JK2 942 aa25.25■■□□□ 1.63
COPS6-203ENST00000419210 COL5A3P25940 1745 aaPredicted RBP25.25■■□□□ 1.63
COPS6-203ENST00000419210 SBF1O95248 1867 aa25.25■■□□□ 1.63
COPS6-203ENST00000419210 FYB1O15117 783 aa25.24■■□□□ 1.63
COPS6-203ENST00000419210 ADRA2BP18089 450 aa25.24■■□□□ 1.63
COPS6-203ENST00000419210 RFC4P35249 363 aa25.24■■□□□ 1.63
COPS6-203ENST00000419210 DALRD3Q5D0E6 543 aaKnown RBP25.24■■□□□ 1.63
COPS6-203ENST00000419210 ZNF831Q5JPB2 1677 aa25.23■■□□□ 1.63
COPS6-203ENST00000419210 KCNA3P22001 575 aa25.23■■□□□ 1.63
COPS6-203ENST00000419210 GYS1P13807 737 aa25.22■■□□□ 1.63
COPS6-203ENST00000419210 ARHGEF1Q92888 912 aaKnown RBP25.22■■□□□ 1.63
COPS6-203ENST00000419210 KDRP35968 1356 aa25.21■■□□□ 1.63
COPS6-203ENST00000419210 ATG3Q9NT62 314 aa25.21■■□□□ 1.63
COPS6-203ENST00000419210 NCAPD2Q15021 1401 aa25.2■■□□□ 1.63
COPS6-203ENST00000419210 IFNL2Q8IZJ0 200 aa25.18■■□□□ 1.62
COPS6-203ENST00000419210 RBM42Q9BTD8 480 aaKnown RBP25.18■■□□□ 1.62
COPS6-203ENST00000419210 TIAM2Q8IVF5 1701 aa25.17■■□□□ 1.62
COPS6-203ENST00000419210 CNTNAP4Q9C0A0 1308 aa25.16■■□□□ 1.62
COPS6-203ENST00000419210 ZC3H4Q9UPT8 1303 aaKnown RBP25.16■■□□□ 1.62
COPS6-203ENST00000419210 PHKG2P15735 406 aa25.16■■□□□ 1.62
COPS6-203ENST00000419210 RC3H1Q5TC82 1133 aaKnown RBP25.16■■□□□ 1.62
COPS6-203ENST00000419210 TESK2Q96S53 571 aa25.16■■□□□ 1.62
COPS6-203ENST00000419210 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.15■■□□□ 1.627e-6■■□□□ 12.8
COPS6-203ENST00000419210 EMILIN1Q9Y6C2 1016 aa25.15■■□□□ 1.62
COPS6-203ENST00000419210 ANKRD26Q9UPS8 1709 aa25.15■■□□□ 1.62
COPS6-203ENST00000419210 PPM1GO15355 546 aaPredicted RBP25.14■■□□□ 1.62
COPS6-203ENST00000419210 SLC24A1O60721 1099 aa25.14■■□□□ 1.62
COPS6-203ENST00000419210 RPS6KA4O75676 772 aa25.14■■□□□ 1.62
COPS6-203ENST00000419210 VEGFAP15692 232 aaPredicted RBP25.14■■□□□ 1.62
COPS6-203ENST00000419210 ST20-MTHFSA0A0A6YYL1 179 aa25.13■■□□□ 1.61
COPS6-203ENST00000419210 CHRNA5P30532 468 aa25.13■■□□□ 1.61
COPS6-203ENST00000419210 RASSF7Q02833 373 aa25.12■■□□□ 1.61
COPS6-203ENST00000419210 SLC4A9Q96Q91 983 aa25.12■■□□□ 1.61
COPS6-203ENST00000419210 TONSLQ96HA7 1378 aa25.12■■□□□ 1.61
COPS6-203ENST00000419210 MYH14Q7Z406 1995 aaKnown RBP25.11■■□□□ 1.61
COPS6-203ENST00000419210 SLC34A2O95436 690 aa25.1■■□□□ 1.61
COPS6-203ENST00000419210 GLTPD2A6NH11 291 aa25.09■■□□□ 1.61
COPS6-203ENST00000419210 KDM6AO15550 1401 aaPredicted RBP25.09■■□□□ 1.61
COPS6-203ENST00000419210 LMNB1P20700 586 aa25.08■■□□□ 1.61
COPS6-203ENST00000419210 DDR1Q08345 913 aa25.08■■□□□ 1.61
COPS6-203ENST00000419210 SRP68Q9UHB9 627 aaKnown RBP25.08■■□□□ 1.61
COPS6-203ENST00000419210 CCDC88AQ3V6T2 1871 aa25.07■■□□□ 1.6
COPS6-203ENST00000419210 FKBP8Q14318 412 aa25.07■■□□□ 1.6
COPS6-203ENST00000419210 EYA1Q99502 592 aa25.07■■□□□ 1.6
COPS6-203ENST00000419210 USP42Q9H9J4 1324 aaKnown RBP25.07■■□□□ 1.6
COPS6-203ENST00000419210 DLEC1Q9Y238 1755 aa25.05■■□□□ 1.6
COPS6-203ENST00000419210 ERVV-2B6SEH9 535 aa25.05■■□□□ 1.6
COPS6-203ENST00000419210 WASHC2AQ641Q2 1341 aa25.03■■□□□ 1.6
COPS6-203ENST00000419210 HSP90AB1P08238 724 aaKnown RBP25.02■■□□□ 1.6
COPS6-203ENST00000419210 CRKLP46109 303 aaKnown RBP25.02■■□□□ 1.6
COPS6-203ENST00000419210 MKRN1Q9UHC7 482 aaKnown RBP25.02■■□□□ 1.6
COPS6-203ENST00000419210 TJP1Q07157 1748 aa25.02■■□□□ 1.6
COPS6-203ENST00000419210 POLRMTO00411 1230 aaKnown RBP25.01■■□□□ 1.59
COPS6-203ENST00000419210 AFDNP55196 1824 aaKnown RBP25■■□□□ 1.59
COPS6-203ENST00000419210 PTCD1O75127 700 aaKnown RBP25■■□□□ 1.59
COPS6-203ENST00000419210 CABP4P57796 275 aa25■■□□□ 1.59
COPS6-203ENST00000419210 CREBZFQ9NS37 354 aa25■■□□□ 1.59
COPS6-203ENST00000419210 FOXN1O15353 648 aa24.98■■□□□ 1.59
COPS6-203ENST00000419210 DPY19L2Q6NUT2 758 aa24.98■■□□□ 1.59
COPS6-203ENST00000419210 ADAMTS7Q9UKP4 1686 aa24.97■■□□□ 1.59
COPS6-203ENST00000419210 PRDM10Q9NQV6 1147 aa24.97■■□□□ 1.59
COPS6-203ENST00000419210 ZPR1O75312 459 aa24.96■■□□□ 1.59
COPS6-203ENST00000419210 AIDAQ96BJ3 306 aa24.96■■□□□ 1.59
COPS6-203ENST00000419210 TM4SF1P30408 202 aa24.95■■□□□ 1.58
COPS6-203ENST00000419210 TTLL6Q8N841 843 aa24.95■■□□□ 1.58
COPS6-203ENST00000419210 NRXN2Q9P2S2 1712 aa24.95■■□□□ 1.58
COPS6-203ENST00000419210 POTECB2RU33 542 aa24.93■■□□□ 1.58
COPS6-203ENST00000419210 USPL1Q5W0Q7 1092 aa24.93■■□□□ 1.58
COPS6-203ENST00000419210 CHADLQ6NUI6 762 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms