RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 KIF7Q2M1P5 1343 aa19.25■□□□□ 0.67
LINC01006-202ENST00000418309 PLEKHG2Q9H7P9 1386 aa19.25■□□□□ 0.67
LINC01006-202ENST00000418309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.25■□□□□ 0.67
LINC01006-202ENST00000418309 ERVV-2B6SEH9 535 aa19.25■□□□□ 0.67
LINC01006-202ENST00000418309 AEBP1Q8IUX7 1158 aa19.25■□□□□ 0.67
LINC01006-202ENST00000418309 ZNF784Q8NCA9 323 aaPredicted RBP19.25■□□□□ 0.67
LINC01006-202ENST00000418309 ITPK1Q13572 414 aa19.24■□□□□ 0.67
LINC01006-202ENST00000418309 C1orf141Q5JVX7 400 aa19.24■□□□□ 0.67
LINC01006-202ENST00000418309 SULT6B1Q6IMI4 303 aa19.24■□□□□ 0.67
LINC01006-202ENST00000418309 AMIGO3Q86WK7 504 aa19.24■□□□□ 0.67
LINC01006-202ENST00000418309 RBM42Q9BTD8 480 aaKnown RBP19.24■□□□□ 0.67
LINC01006-202ENST00000418309 GNPATO15228 680 aa19.23■□□□□ 0.67
LINC01006-202ENST00000418309 SSFA2P28290 1259 aa19.23■□□□□ 0.67
LINC01006-202ENST00000418309 CABP4P57796 275 aa19.23■□□□□ 0.67
LINC01006-202ENST00000418309 AMER1Q5JTC6 1135 aaPredicted RBP19.23■□□□□ 0.67
LINC01006-202ENST00000418309 UBR3Q6ZT12 1888 aa19.22■□□□□ 0.67
LINC01006-202ENST00000418309 MTHFSP49914 203 aa19.22■□□□□ 0.67
LINC01006-202ENST00000418309 IL13P35225 146 aa19.21■□□□□ 0.67
LINC01006-202ENST00000418309 CD2APQ9Y5K6 639 aa19.21■□□□□ 0.67
LINC01006-202ENST00000418309 GRIN3BO60391 1043 aa19.19■□□□□ 0.66
LINC01006-202ENST00000418309 CC2D1BQ5T0F9 858 aaKnown RBP19.19■□□□□ 0.66
LINC01006-202ENST00000418309 YBX3P16989 372 aaKnown RBP eCLIP19.18■□□□□ 0.66
LINC01006-202ENST00000418309 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
LINC01006-202ENST00000418309 RTCBQ9Y3I0 505 aaKnown RBP19.18■□□□□ 0.66
LINC01006-202ENST00000418309 UTRNP46939 3433 aa19.18■□□□□ 0.66
LINC01006-202ENST00000418309 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
LINC01006-202ENST00000418309 TRAPPC3LQ5T215 181 aa19.17■□□□□ 0.66
LINC01006-202ENST00000418309 NFATC2IPQ8NCF5 419 aa19.17■□□□□ 0.66
LINC01006-202ENST00000418309 PER1O15534 1290 aaPredicted RBP19.16■□□□□ 0.66
LINC01006-202ENST00000418309 PTCD1O75127 700 aaKnown RBP19.16■□□□□ 0.66
LINC01006-202ENST00000418309 SLC4A9Q96Q91 983 aa19.16■□□□□ 0.66
LINC01006-202ENST00000418309 HMOX1P09601 288 aa19.15■□□□□ 0.66
LINC01006-202ENST00000418309 KDRP35968 1356 aa19.15■□□□□ 0.66
LINC01006-202ENST00000418309 RC3H1Q5TC82 1133 aaKnown RBP19.14■□□□□ 0.65
LINC01006-202ENST00000418309 DIAPH1O60610 1272 aaKnown RBP19.13■□□□□ 0.65
LINC01006-202ENST00000418309 AKAP4Q5JQC9 854 aa19.13■□□□□ 0.65
LINC01006-202ENST00000418309 MMP10P09238 476 aa19.12■□□□□ 0.65
LINC01006-202ENST00000418309 RFC4P35249 363 aa19.12■□□□□ 0.65
LINC01006-202ENST00000418309 ARHGEF1Q92888 912 aaKnown RBP19.12■□□□□ 0.65
LINC01006-202ENST00000418309 WWC3Q9ULE0 1092 aa19.12■□□□□ 0.65
LINC01006-202ENST00000418309 CNTNAP4Q9C0A0 1308 aa19.11■□□□□ 0.65
LINC01006-202ENST00000418309 RPS6KA4O75676 772 aa19.11■□□□□ 0.65
LINC01006-202ENST00000418309 NLGN1Q8N2Q7 840 aa19.1■□□□□ 0.65
LINC01006-202ENST00000418309 CNKSR2Q8WXI2 1034 aa19.1■□□□□ 0.65
LINC01006-202ENST00000418309 LGR6Q9HBX8 967 aa19.1■□□□□ 0.65
LINC01006-202ENST00000418309 ZNF831Q5JPB2 1677 aa19.1■□□□□ 0.65
LINC01006-202ENST00000418309 SCN11AQ9UI33 1791 aa19.09■□□□□ 0.65
LINC01006-202ENST00000418309 CRKLP46109 303 aaKnown RBP19.08■□□□□ 0.64
LINC01006-202ENST00000418309 SLC52A2Q9HAB3 445 aa19.08■□□□□ 0.64
LINC01006-202ENST00000418309 COL5A3P25940 1745 aaPredicted RBP19.08■□□□□ 0.64
LINC01006-202ENST00000418309 U2SURPO15042 1029 aaKnown RBP19.07■□□□□ 0.64
LINC01006-202ENST00000418309 RNMTO43148 476 aaKnown RBP19.07■□□□□ 0.64
LINC01006-202ENST00000418309 MTHFSDQ2M296 383 aaKnown RBP19.07■□□□□ 0.64
LINC01006-202ENST00000418309 GOLGB1Q14789 3259 aaKnown RBP19.06■□□□□ 0.64
LINC01006-202ENST00000418309 MYH14Q7Z406 1995 aaKnown RBP19.06■□□□□ 0.64
LINC01006-202ENST00000418309 GYS1P13807 737 aa19.06■□□□□ 0.64
LINC01006-202ENST00000418309 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
LINC01006-202ENST00000418309 C1QTNF8P60827 252 aa19.05■□□□□ 0.64
LINC01006-202ENST00000418309 SLC39A6Q13433 755 aa19.05■□□□□ 0.64
LINC01006-202ENST00000418309 PARP3Q9Y6F1 533 aa19.05■□□□□ 0.64
LINC01006-202ENST00000418309 NPC1L1Q9UHC9 1359 aa19.05■□□□□ 0.64
LINC01006-202ENST00000418309 HOXD11P31277 338 aaPredicted RBP19.04■□□□□ 0.64
LINC01006-202ENST00000418309 CCDC87Q9NVE4 849 aa19.04■□□□□ 0.64
LINC01006-202ENST00000418309 DNAJC10Q8IXB1 793 aa19.03■□□□□ 0.64
LINC01006-202ENST00000418309 SRP68Q9UHB9 627 aaKnown RBP19.03■□□□□ 0.64
LINC01006-202ENST00000418309 CICQ96RK0 1608 aaPredicted RBP19.03■□□□□ 0.64
LINC01006-202ENST00000418309 VIRMAQ69YN4 1812 aaKnown RBP19.02■□□□□ 0.64
LINC01006-202ENST00000418309 TGFB2P61812 414 aa19.02■□□□□ 0.64
LINC01006-202ENST00000418309 A0A0G2JLW4 131 aa19.01■□□□□ 0.63
LINC01006-202ENST00000418309 INTS5Q6P9B9 1019 aaKnown RBP19.01■□□□□ 0.63
LINC01006-202ENST00000418309 TJP1Q07157 1748 aa19■□□□□ 0.63
LINC01006-202ENST00000418309 SENP3-EIF4A1A0A087X0R7 540 aa19■□□□□ 0.63
LINC01006-202ENST00000418309 CFAP53Q96M91 514 aa19■□□□□ 0.63
LINC01006-202ENST00000418309 BCS1LQ9Y276 419 aa19■□□□□ 0.63
LINC01006-202ENST00000418309 C4AP0C0L4 1744 aa19■□□□□ 0.63
LINC01006-202ENST00000418309 N4BP2Q86UW6 1770 aaPredicted RBP18.99■□□□□ 0.63
LINC01006-202ENST00000418309 ZPR1O75312 459 aa18.99■□□□□ 0.63
LINC01006-202ENST00000418309 FKBP8Q14318 412 aa18.99■□□□□ 0.63
LINC01006-202ENST00000418309 ATP10DQ9P241 1426 aa18.99■□□□□ 0.63
LINC01006-202ENST00000418309 USP42Q9H9J4 1324 aaKnown RBP18.99■□□□□ 0.63
LINC01006-202ENST00000418309 PXDNLA1KZ92 1463 aa18.98■□□□□ 0.63
LINC01006-202ENST00000418309 CYP19A1P11511 503 aaPredicted RBP18.98■□□□□ 0.63
LINC01006-202ENST00000418309 TTC5Q8N0Z6 440 aa18.98■□□□□ 0.63
LINC01006-202ENST00000418309 GAS2L2Q8NHY3 880 aa18.98■□□□□ 0.63
LINC01006-202ENST00000418309 ZNF526Q8TF50 670 aaPredicted RBP18.98■□□□□ 0.63
LINC01006-202ENST00000418309 KIF13BQ9NQT8 1826 aa18.97■□□□□ 0.63
LINC01006-202ENST00000418309 COL3A1P02461 1466 aaPredicted RBP18.97■□□□□ 0.63
LINC01006-202ENST00000418309 MRC1P22897 1456 aa18.97■□□□□ 0.63
LINC01006-202ENST00000418309 GNAT3A8MTJ3 354 aa18.97■□□□□ 0.63
LINC01006-202ENST00000418309 DPEP1P16444 411 aa18.97■□□□□ 0.63
LINC01006-202ENST00000418309 TEFQ10587 303 aa18.97■□□□□ 0.63
LINC01006-202ENST00000418309 GPBP1L1Q9HC44 474 aaPredicted RBP18.97■□□□□ 0.63
LINC01006-202ENST00000418309 C10orf71Q711Q0 1435 aa18.97■□□□□ 0.63
LINC01006-202ENST00000418309 USPL1Q5W0Q7 1092 aa18.96■□□□□ 0.63
LINC01006-202ENST00000418309 SOS1Q07889 1333 aaPredicted RBP18.96■□□□□ 0.63
LINC01006-202ENST00000418309 FCHSD2O94868 740 aa18.95■□□□□ 0.62
LINC01006-202ENST00000418309 VSIG10Q8N0Z9 540 aa18.95■□□□□ 0.62
LINC01006-202ENST00000418309 NUDCQ9Y266 331 aa18.95■□□□□ 0.62
LINC01006-202ENST00000418309 CANXP27824 592 aaKnown RBP18.94■□□□□ 0.62
LINC01006-202ENST00000418309 DDR1Q08345 913 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 626.9 ms