RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 COL24A1Q17RW2 1714 aa21.02■□□□□ 0.96
ITGB1-204ENST00000417122 AK7Q96M32 723 aa21.02■□□□□ 0.96
ITGB1-204ENST00000417122 VIRMAQ69YN4 1812 aaKnown RBP21.01■□□□□ 0.95
ITGB1-204ENST00000417122 MTHFSDQ2M296 383 aaKnown RBP21.01■□□□□ 0.95
ITGB1-204ENST00000417122 LINC00116Q8NCU8 138 aa21.01■□□□□ 0.95
ITGB1-204ENST00000417122 ARXQ96QS3 562 aa21.01■□□□□ 0.95
ITGB1-204ENST00000417122 ITPK1Q13572 414 aa21■□□□□ 0.95
ITGB1-204ENST00000417122 NFATC2IPQ8NCF5 419 aa21■□□□□ 0.95
ITGB1-204ENST00000417122 FLAD1Q8NFF5 587 aa21■□□□□ 0.95
ITGB1-204ENST00000417122 RBM42Q9BTD8 480 aaKnown RBP21■□□□□ 0.95
ITGB1-204ENST00000417122 UBR3Q6ZT12 1888 aa21■□□□□ 0.95
ITGB1-204ENST00000417122 POLD1P28340 1107 aa20.99■□□□□ 0.95
ITGB1-204ENST00000417122 FHDC1Q9C0D6 1143 aaPredicted RBP20.99■□□□□ 0.95
ITGB1-204ENST00000417122 ZNF831Q5JPB2 1677 aa20.99■□□□□ 0.95
ITGB1-204ENST00000417122 LGR6Q9HBX8 967 aa20.98■□□□□ 0.95
ITGB1-204ENST00000417122 SLC4A9Q96Q91 983 aa20.97■□□□□ 0.95
ITGB1-204ENST00000417122 SYT17Q9BSW7 474 aa20.97■□□□□ 0.95
ITGB1-204ENST00000417122 NUDCQ9Y266 331 aa20.97■□□□□ 0.95
ITGB1-204ENST00000417122 RNMTO43148 476 aaKnown RBP20.96■□□□□ 0.95
ITGB1-204ENST00000417122 AMIGO3Q86WK7 504 aa20.96■□□□□ 0.95
ITGB1-204ENST00000417122 SLC52A2Q9HAB3 445 aa20.96■□□□□ 0.95
ITGB1-204ENST00000417122 PHF14O94880 888 aa20.95■□□□□ 0.94
ITGB1-204ENST00000417122 SSFA2P28290 1259 aa20.95■□□□□ 0.94
ITGB1-204ENST00000417122 ADAMTS7Q9UKP4 1686 aa20.95■□□□□ 0.94
ITGB1-204ENST00000417122 COL5A3P25940 1745 aaPredicted RBP20.95■□□□□ 0.94
ITGB1-204ENST00000417122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.94■□□□□ 0.94
ITGB1-204ENST00000417122 DCAF8L1A6NGE4 600 aa20.94■□□□□ 0.94
ITGB1-204ENST00000417122 GNPATO15228 680 aa20.94■□□□□ 0.94
ITGB1-204ENST00000417122 PTCD1O75127 700 aaKnown RBP20.94■□□□□ 0.94
ITGB1-204ENST00000417122 SMIM5Q71RC9 77 aa20.94■□□□□ 0.94
ITGB1-204ENST00000417122 MRC1P22897 1456 aa20.94■□□□□ 0.94
ITGB1-204ENST00000417122 MSL1Q68DK7 614 aa20.93■□□□□ 0.94
ITGB1-204ENST00000417122 GAS2L2Q8NHY3 880 aa20.93■□□□□ 0.94
ITGB1-204ENST00000417122 RSPH6AQ9H0K4 717 aa20.93■□□□□ 0.94
ITGB1-204ENST00000417122 U2AF1L5P0DN76 240 aaPredicted RBP20.92■□□□□ 0.94
ITGB1-204ENST00000417122 PRKAR2BP31323 418 aa20.92■□□□□ 0.94
ITGB1-204ENST00000417122 U2AF1Q01081 240 aaKnown RBP eCLIP20.92■□□□□ 0.94
ITGB1-204ENST00000417122 MAP3K5Q99683 1374 aa20.92■□□□□ 0.94
ITGB1-204ENST00000417122 GNAT3A8MTJ3 354 aa20.9■□□□□ 0.94
ITGB1-204ENST00000417122 DDX10Q13206 875 aaKnown RBP20.9■□□□□ 0.94
ITGB1-204ENST00000417122 RC3H1Q5TC82 1133 aaKnown RBP20.9■□□□□ 0.94
ITGB1-204ENST00000417122 KLHL34Q8N239 644 aa20.9■□□□□ 0.94
ITGB1-204ENST00000417122 CNTNAP4Q9C0A0 1308 aa20.89■□□□□ 0.93
ITGB1-204ENST00000417122 PHACTR3Q96KR7 559 aa20.89■□□□□ 0.93
ITGB1-204ENST00000417122 RTCBQ9Y3I0 505 aaKnown RBP20.89■□□□□ 0.93
ITGB1-204ENST00000417122 TJP1Q07157 1748 aa20.89■□□□□ 0.93
ITGB1-204ENST00000417122 CICQ96RK0 1608 aaPredicted RBP20.89■□□□□ 0.93
ITGB1-204ENST00000417122 FCHSD2O94868 740 aa20.88■□□□□ 0.93
ITGB1-204ENST00000417122 SLC39A6Q13433 755 aa20.88■□□□□ 0.93
ITGB1-204ENST00000417122 MYH14Q7Z406 1995 aaKnown RBP20.87■□□□□ 0.93
ITGB1-204ENST00000417122 TRAPPC3LQ5T215 181 aa20.87■□□□□ 0.93
ITGB1-204ENST00000417122 IL17REQ8NFR9 667 aa20.87■□□□□ 0.93
ITGB1-204ENST00000417122 RPS6KA4O75676 772 aa20.86■□□□□ 0.93
ITGB1-204ENST00000417122 CRKLP46109 303 aaKnown RBP20.85■□□□□ 0.93
ITGB1-204ENST00000417122 TEFQ10587 303 aa20.85■□□□□ 0.93
ITGB1-204ENST00000417122 RALBP1Q15311 655 aa20.85■□□□□ 0.93
ITGB1-204ENST00000417122 KCPQ6ZWJ8 1503 aa20.84■□□□□ 0.93
ITGB1-204ENST00000417122 ADRA2BP18089 450 aa20.84■□□□□ 0.93
ITGB1-204ENST00000417122 SIPA1L3O60292 1781 aaPredicted RBP20.84■□□□□ 0.93
ITGB1-204ENST00000417122 UBR2Q8IWV8 1755 aa20.83■□□□□ 0.93
ITGB1-204ENST00000417122 DNAJC10Q8IXB1 793 aa20.83■□□□□ 0.93
ITGB1-204ENST00000417122 ARHGEF1Q92888 912 aaKnown RBP20.83■□□□□ 0.93
ITGB1-204ENST00000417122 TTC5Q8N0Z6 440 aa20.82■□□□□ 0.92
ITGB1-204ENST00000417122 NLGN2Q8NFZ4 835 aa20.82■□□□□ 0.92
ITGB1-204ENST00000417122 CEMIPQ8WUJ3 1361 aa20.82■□□□□ 0.92
ITGB1-204ENST00000417122 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
ITGB1-204ENST00000417122 RFC4P35249 363 aa20.81■□□□□ 0.92
ITGB1-204ENST00000417122 ZEB1P37275 1124 aaPredicted RBP20.81■□□□□ 0.92
ITGB1-204ENST00000417122 VSIG10Q8N0Z9 540 aa20.8■□□□□ 0.92
ITGB1-204ENST00000417122 NEFMP07197 916 aa20.79■□□□□ 0.92
ITGB1-204ENST00000417122 INTS5Q6P9B9 1019 aaKnown RBP20.79■□□□□ 0.92
ITGB1-204ENST00000417122 ZNF790Q6PG37 636 aa20.79■□□□□ 0.92
ITGB1-204ENST00000417122 RTF1Q92541 710 aaKnown RBP20.79■□□□□ 0.92
ITGB1-204ENST00000417122 CCDC87Q9NVE4 849 aa20.79■□□□□ 0.92
ITGB1-204ENST00000417122 CD2APQ9Y5K6 639 aa20.79■□□□□ 0.92
ITGB1-204ENST00000417122 CYP19A1P11511 503 aaPredicted RBP20.78■□□□□ 0.92
ITGB1-204ENST00000417122 NLGN1Q8N2Q7 840 aa20.78■□□□□ 0.92
ITGB1-204ENST00000417122 YY1P25490 414 aa20.77■□□□□ 0.92
ITGB1-204ENST00000417122 GPR162Q16538 588 aa20.77■□□□□ 0.92
ITGB1-204ENST00000417122 BTBD11A6QL63 1104 aa20.76■□□□□ 0.91
ITGB1-204ENST00000417122 HTATSF1O43719 755 aaKnown RBP20.76■□□□□ 0.91
ITGB1-204ENST00000417122 MMP10P09238 476 aa20.76■□□□□ 0.91
ITGB1-204ENST00000417122 GYS1P13807 737 aa20.76■□□□□ 0.91
ITGB1-204ENST00000417122 MCM10Q7L590 875 aa20.76■□□□□ 0.91
ITGB1-204ENST00000417122 ZNF496Q96IT1 587 aaPredicted RBP20.76■□□□□ 0.91
ITGB1-204ENST00000417122 MYBBP1AQ9BQG0 1328 aaKnown RBP20.76■□□□□ 0.91
ITGB1-204ENST00000417122 DLG5Q8TDM6 1919 aa20.75■□□□□ 0.91
ITGB1-204ENST00000417122 PELP1Q8IZL8 1130 aaKnown RBP20.75■□□□□ 0.91
ITGB1-204ENST00000417122 PLEKHF1Q96S99 279 aa20.75■□□□□ 0.91
ITGB1-204ENST00000417122 PNNQ9H307 717 aaKnown RBP20.75■□□□□ 0.91
ITGB1-204ENST00000417122 HEG1Q9ULI3 1381 aa20.74■□□□□ 0.91
ITGB1-204ENST00000417122 DCTN1Q14203 1278 aa20.74■□□□□ 0.91
ITGB1-204ENST00000417122 SRP68Q9UHB9 627 aaKnown RBP20.74■□□□□ 0.91
ITGB1-204ENST00000417122 ZBTB1Q9Y2K1 713 aa20.74■□□□□ 0.91
ITGB1-204ENST00000417122 SOS1Q07889 1333 aaPredicted RBP20.74■□□□□ 0.91
ITGB1-204ENST00000417122 USP42Q9H9J4 1324 aaKnown RBP20.74■□□□□ 0.91
ITGB1-204ENST00000417122 FMNL2Q96PY5 1086 aa20.73■□□□□ 0.91
ITGB1-204ENST00000417122 KCNQ3O43525 872 aa20.72■□□□□ 0.91
ITGB1-204ENST00000417122 STARD3NLO95772 234 aa20.72■□□□□ 0.91
ITGB1-204ENST00000417122 TEX13AQ9BXU3 409 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms