RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 KIF7Q2M1P5 1343 aa29.75■■■□□ 2.35
ACTB-203ENST00000417101 HSP90AB1P08238 724 aaKnown RBP29.75■■■□□ 2.35
ACTB-203ENST00000417101 DCAF5Q96JK2 942 aa29.75■■■□□ 2.35
ACTB-203ENST00000417101 ERVV-2B6SEH9 535 aa29.74■■■□□ 2.35
ACTB-203ENST00000417101 SSFA2P28290 1259 aa29.74■■■□□ 2.35
ACTB-203ENST00000417101 AMOTQ4VCS5 1084 aa29.74■■■□□ 2.35
ACTB-203ENST00000417101 AMER1Q5JTC6 1135 aaPredicted RBP29.74■■■□□ 2.35
ACTB-203ENST00000417101 UBR3Q6ZT12 1888 aa29.73■■■□□ 2.35
ACTB-203ENST00000417101 GNPATO15228 680 aa29.72■■■□□ 2.35
ACTB-203ENST00000417101 SULT6B1Q6IMI4 303 aa29.71■■■□□ 2.35
ACTB-203ENST00000417101 CD2APQ9Y5K6 639 aa29.71■■■□□ 2.35
ACTB-203ENST00000417101 YBX3P16989 372 aaKnown RBP eCLIP29.7■■■□□ 2.354e-79■□□□□ 9.7
ACTB-203ENST00000417101 KDM6AO15550 1401 aaPredicted RBP29.7■■■□□ 2.34
ACTB-203ENST00000417101 IL13P35225 146 aa29.69■■■□□ 2.34
ACTB-203ENST00000417101 RBM42Q9BTD8 480 aaKnown RBP29.69■■■□□ 2.34
ACTB-203ENST00000417101 CABP4P57796 275 aa29.68■■■□□ 2.34
ACTB-203ENST00000417101 C1orf141Q5JVX7 400 aa29.68■■■□□ 2.34
ACTB-203ENST00000417101 KDRP35968 1356 aa29.67■■■□□ 2.34
ACTB-203ENST00000417101 MTHFSP49914 203 aa29.67■■■□□ 2.34
ACTB-203ENST00000417101 SLC4A9Q96Q91 983 aa29.67■■■□□ 2.34
ACTB-203ENST00000417101 GRIN3BO60391 1043 aa29.66■■■□□ 2.34
ACTB-203ENST00000417101 PER1O15534 1290 aaPredicted RBP29.62■■■□□ 2.33
ACTB-203ENST00000417101 RTCBQ9Y3I0 505 aaKnown RBP29.62■■■□□ 2.33
ACTB-203ENST00000417101 CC2D1BQ5T0F9 858 aaKnown RBP29.6■■■□□ 2.33
ACTB-203ENST00000417101 NFATC2IPQ8NCF5 419 aa29.6■■■□□ 2.33
ACTB-203ENST00000417101 PTCD1O75127 700 aaKnown RBP29.59■■■□□ 2.33
ACTB-203ENST00000417101 TRAPPC3LQ5T215 181 aa29.59■■■□□ 2.33
ACTB-203ENST00000417101 RC3H1Q5TC82 1133 aaKnown RBP29.59■■■□□ 2.33
ACTB-203ENST00000417101 ZNF831Q5JPB2 1677 aa29.56■■■□□ 2.32
ACTB-203ENST00000417101 CNTNAP4Q9C0A0 1308 aa29.56■■■□□ 2.32
ACTB-203ENST00000417101 MMP10P09238 476 aa29.56■■■□□ 2.32
ACTB-203ENST00000417101 HMOX1P09601 288 aa29.56■■■□□ 2.32
ACTB-203ENST00000417101 AKAP4Q5JQC9 854 aa29.55■■■□□ 2.32
ACTB-203ENST00000417101 ARHGEF1Q92888 912 aaKnown RBP29.55■■■□□ 2.32
ACTB-203ENST00000417101 RPS6KA4O75676 772 aa29.54■■■□□ 2.32
ACTB-203ENST00000417101 ADRA2BP18089 450 aa29.54■■■□□ 2.32
ACTB-203ENST00000417101 WWC3Q9ULE0 1092 aa29.54■■■□□ 2.32
ACTB-203ENST00000417101 CNGB1Q14028 1251 aaPredicted RBP29.53■■■□□ 2.32
ACTB-203ENST00000417101 COL5A3P25940 1745 aaPredicted RBP29.52■■■□□ 2.32
ACTB-203ENST00000417101 DIAPH1O60610 1272 aaKnown RBP29.52■■■□□ 2.32
ACTB-203ENST00000417101 NLGN1Q8N2Q7 840 aa29.52■■■□□ 2.32
ACTB-203ENST00000417101 RFC4P35249 363 aa29.51■■■□□ 2.31
ACTB-203ENST00000417101 LGR6Q9HBX8 967 aa29.5■■■□□ 2.31
ACTB-203ENST00000417101 CRKLP46109 303 aaKnown RBP29.49■■■□□ 2.31
ACTB-203ENST00000417101 GYS1P13807 737 aa29.48■■■□□ 2.31
ACTB-203ENST00000417101 C1QTNF8P60827 252 aa29.48■■■□□ 2.31
ACTB-203ENST00000417101 SLC52A2Q9HAB3 445 aa29.48■■■□□ 2.31
ACTB-203ENST00000417101 SCN11AQ9UI33 1791 aa29.48■■■□□ 2.31
ACTB-203ENST00000417101 MYH14Q7Z406 1995 aaKnown RBP29.47■■■□□ 2.31
ACTB-203ENST00000417101 RNMTO43148 476 aaKnown RBP29.46■■■□□ 2.31
ACTB-203ENST00000417101 MTHFSDQ2M296 383 aaKnown RBP29.46■■■□□ 2.31
ACTB-203ENST00000417101 NPC1L1Q9UHC9 1359 aa29.46■■■□□ 2.31
ACTB-203ENST00000417101 GIGYF1O75420 1035 aaPredicted RBP29.45■■■□□ 2.31
ACTB-203ENST00000417101 CICQ96RK0 1608 aaPredicted RBP29.45■■■□□ 2.3
ACTB-203ENST00000417101 SLC39A6Q13433 755 aa29.42■■■□□ 2.3
ACTB-203ENST00000417101 SRP68Q9UHB9 627 aaKnown RBP29.42■■■□□ 2.3
ACTB-203ENST00000417101 PARP3Q9Y6F1 533 aa29.42■■■□□ 2.3
ACTB-203ENST00000417101 TJP1Q07157 1748 aa29.42■■■□□ 2.3
ACTB-203ENST00000417101 U2SURPO15042 1029 aaKnown RBP29.41■■■□□ 2.3
ACTB-203ENST00000417101 INTS5Q6P9B9 1019 aaKnown RBP29.41■■■□□ 2.3
ACTB-203ENST00000417101 DNAJC10Q8IXB1 793 aa29.41■■■□□ 2.3
ACTB-203ENST00000417101 CCDC87Q9NVE4 849 aa29.41■■■□□ 2.3
ACTB-203ENST00000417101 ATP10DQ9P241 1426 aa29.41■■■□□ 2.3
ACTB-203ENST00000417101 PXDNLA1KZ92 1463 aa29.41■■■□□ 2.3
ACTB-203ENST00000417101 MRC1P22897 1456 aa29.41■■■□□ 2.3
ACTB-203ENST00000417101 C10orf71Q711Q0 1435 aa29.4■■■□□ 2.3
ACTB-203ENST00000417101 TGFB2P61812 414 aa29.4■■■□□ 2.3
ACTB-203ENST00000417101 COL3A1P02461 1466 aaPredicted RBP29.4■■■□□ 2.3
ACTB-203ENST00000417101 C4AP0C0L4 1744 aa29.4■■■□□ 2.3
ACTB-203ENST00000417101 SENP3-EIF4A1A0A087X0R7 540 aa29.38■■■□□ 2.29
ACTB-203ENST00000417101 A0A0G2JLW4 131 aa29.38■■■□□ 2.29
ACTB-203ENST00000417101 USP42Q9H9J4 1324 aaKnown RBP29.38■■■□□ 2.29
ACTB-203ENST00000417101 FKBP8Q14318 412 aa29.37■■■□□ 2.29
ACTB-203ENST00000417101 KIF13BQ9NQT8 1826 aa29.36■■■□□ 2.29
ACTB-203ENST00000417101 ADCY9O60503 1353 aa29.35■■■□□ 2.29
ACTB-203ENST00000417101 CYP19A1P11511 503 aaPredicted RBP29.34■■■□□ 2.29
ACTB-203ENST00000417101 DPEP1P16444 411 aa29.34■■■□□ 2.29
ACTB-203ENST00000417101 BCS1LQ9Y276 419 aa29.34■■■□□ 2.29
ACTB-203ENST00000417101 ADAMTS7Q9UKP4 1686 aa29.34■■■□□ 2.29
ACTB-203ENST00000417101 KIAA1551Q9HCM1 1747 aa29.34■■■□□ 2.29
ACTB-203ENST00000417101 KCPQ6ZWJ8 1503 aa29.33■■■□□ 2.29
ACTB-203ENST00000417101 N4BP2Q86UW6 1770 aaPredicted RBP29.33■■■□□ 2.29
ACTB-203ENST00000417101 SOS1Q07889 1333 aaPredicted RBP29.32■■■□□ 2.28
ACTB-203ENST00000417101 DDR1Q08345 913 aa29.32■■■□□ 2.28
ACTB-203ENST00000417101 ZNF526Q8TF50 670 aaPredicted RBP29.32■■■□□ 2.28
ACTB-203ENST00000417101 GPBP1L1Q9HC44 474 aaPredicted RBP29.32■■■□□ 2.28
ACTB-203ENST00000417101 ZPR1O75312 459 aa29.31■■■□□ 2.28
ACTB-203ENST00000417101 VIRMAQ69YN4 1812 aaKnown RBP29.31■■■□□ 2.28
ACTB-203ENST00000417101 GAS2L2Q8NHY3 880 aa29.3■■■□□ 2.28
ACTB-203ENST00000417101 GNAT3A8MTJ3 354 aa29.29■■■□□ 2.28
ACTB-203ENST00000417101 USPL1Q5W0Q7 1092 aa29.29■■■□□ 2.28
ACTB-203ENST00000417101 VSIG10Q8N0Z9 540 aa29.29■■■□□ 2.28
ACTB-203ENST00000417101 ZBTB1Q9Y2K1 713 aa29.29■■■□□ 2.28
ACTB-203ENST00000417101 FCHSD2O94868 740 aa29.28■■■□□ 2.28
ACTB-203ENST00000417101 TEFQ10587 303 aa29.28■■■□□ 2.28
ACTB-203ENST00000417101 IL17REQ8NFR9 667 aa29.28■■■□□ 2.28
ACTB-203ENST00000417101 CFAP53Q96M91 514 aa29.28■■■□□ 2.28
ACTB-203ENST00000417101 TTC5Q8N0Z6 440 aa29.27■■■□□ 2.28
ACTB-203ENST00000417101 KCNA3P22001 575 aa29.26■■■□□ 2.27
ACTB-203ENST00000417101 TM4SF1P30408 202 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms