RNA–Protein interactions for RNA: ENST00000416774.1

LINC01342-201, Transcript of long intergenic non-protein coding RNA 1342, humanhuman

TSL 1 (best) BASIC

Gene LINC01342, Length 1,620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01342-201ENST00000416774 HDAC1Q13547 482 aaPredicted RBP29.93■■■□□ 2.38
LINC01342-201ENST00000416774 AKAP4Q5JQC9 854 aa29.93■■■□□ 2.38
LINC01342-201ENST00000416774 UNC5CLQ8IV45 518 aa29.93■■■□□ 2.38
LINC01342-201ENST00000416774 PLCH1Q4KWH8 1693 aa29.92■■■□□ 2.38
LINC01342-201ENST00000416774 PTPRCP08575 1304 aa29.91■■■□□ 2.38
LINC01342-201ENST00000416774 CACNA1FO60840 1977 aa29.91■■■□□ 2.38
LINC01342-201ENST00000416774 PDE4AP27815 886 aa29.89■■■□□ 2.38
LINC01342-201ENST00000416774 BACH2Q9BYV9 841 aa29.89■■■□□ 2.38
LINC01342-201ENST00000416774 TRPC5Q9UL62 973 aaPredicted RBP29.89■■■□□ 2.38
LINC01342-201ENST00000416774 NWD2Q9ULI1 1742 aa29.87■■■□□ 2.37
LINC01342-201ENST00000416774 KRT24Q2M2I5 525 aa29.87■■■□□ 2.37
LINC01342-201ENST00000416774 MIS18AQ9NYP9 233 aa29.87■■■□□ 2.37
LINC01342-201ENST00000416774 ZBTB7BO15156 539 aaPredicted RBP29.86■■■□□ 2.37
LINC01342-201ENST00000416774 ATRNO75882 1429 aa29.86■■■□□ 2.37
LINC01342-201ENST00000416774 ZNF530Q6P9A1 599 aaPredicted RBP29.85■■■□□ 2.37
LINC01342-201ENST00000416774 KDM3BQ7LBC6 1761 aa29.84■■■□□ 2.37
LINC01342-201ENST00000416774 RXRBP28702 533 aa29.84■■■□□ 2.37
LINC01342-201ENST00000416774 INTS3Q68E01 1043 aaKnown RBP29.84■■■□□ 2.37
LINC01342-201ENST00000416774 ILDR2Q71H61 639 aa29.84■■■□□ 2.37
LINC01342-201ENST00000416774 CHMP4AQ9BY43 222 aa29.84■■■□□ 2.37
LINC01342-201ENST00000416774 VIRMAQ69YN4 1812 aaKnown RBP29.84■■■□□ 2.37
LINC01342-201ENST00000416774 ADAMTS7Q9UKP4 1686 aa29.83■■■□□ 2.37
LINC01342-201ENST00000416774 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.83■■■□□ 2.37
LINC01342-201ENST00000416774 C1orf141Q5JVX7 400 aa29.83■■■□□ 2.37
LINC01342-201ENST00000416774 STRN4Q9NRL3 753 aa29.82■■■□□ 2.36
LINC01342-201ENST00000416774 NRAPQ86VF7 1730 aa29.81■■■□□ 2.36
LINC01342-201ENST00000416774 RGS12O14924 1447 aa29.81■■■□□ 2.36
LINC01342-201ENST00000416774 EVA1CP58658 441 aa29.81■■■□□ 2.36
LINC01342-201ENST00000416774 RBM6P78332 1123 aaKnown RBP29.81■■■□□ 2.36
LINC01342-201ENST00000416774 VPS72Q15906 364 aa29.81■■■□□ 2.36
LINC01342-201ENST00000416774 CCDC30Q5VVM6 783 aa29.81■■■□□ 2.36
LINC01342-201ENST00000416774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.81■■■□□ 2.36
LINC01342-201ENST00000416774 CCDC9Q9Y3X0 531 aaKnown RBP29.81■■■□□ 2.36
LINC01342-201ENST00000416774 SKAP1Q86WV1 359 aa29.8■■■□□ 2.36
LINC01342-201ENST00000416774 HOXB7P09629 217 aa29.79■■■□□ 2.36
LINC01342-201ENST00000416774 GJD4Q96KN9 370 aaPredicted RBP29.79■■■□□ 2.36
LINC01342-201ENST00000416774 SLC4A2P04920 1241 aa29.78■■■□□ 2.36
LINC01342-201ENST00000416774 STK31Q9BXU1 1019 aa29.78■■■□□ 2.36
LINC01342-201ENST00000416774 RNMTO43148 476 aaKnown RBP29.78■■■□□ 2.36
LINC01342-201ENST00000416774 FAM161AQ3B820 660 aa29.78■■■□□ 2.36
LINC01342-201ENST00000416774 SMC5Q8IY18 1101 aa29.78■■■□□ 2.36
LINC01342-201ENST00000416774 RAPGEF4Q8WZA2 1011 aa29.78■■■□□ 2.36
LINC01342-201ENST00000416774 RGS3P49796 1198 aa29.77■■■□□ 2.36
LINC01342-201ENST00000416774 TEFQ10587 303 aa29.77■■■□□ 2.36
LINC01342-201ENST00000416774 LGR6Q9HBX8 967 aa29.77■■■□□ 2.36
LINC01342-201ENST00000416774 NLRP2Q9NX02 1062 aa29.76■■■□□ 2.35
LINC01342-201ENST00000416774 PDZRN3Q9UPQ7 1066 aa29.76■■■□□ 2.35
LINC01342-201ENST00000416774 TATP17735 454 aaPredicted RBP29.75■■■□□ 2.35
LINC01342-201ENST00000416774 SIPA1L3O60292 1781 aaPredicted RBP29.75■■■□□ 2.35
LINC01342-201ENST00000416774 COL5A2P05997 1499 aaPredicted RBP29.75■■■□□ 2.35
LINC01342-201ENST00000416774 LARP1Q6PKG0 1096 aaKnown RBP29.74■■■□□ 2.35
LINC01342-201ENST00000416774 SPG7Q9UQ90 795 aa29.73■■■□□ 2.35
LINC01342-201ENST00000416774 EIF4A1P60842 406 aaKnown RBP29.72■■■□□ 2.35
LINC01342-201ENST00000416774 CSB-PGBD3P0DP91 1061 aa29.71■■■□□ 2.35
LINC01342-201ENST00000416774 MPRIPQ6WCQ1 1025 aa29.71■■■□□ 2.35
LINC01342-201ENST00000416774 PKD1L3Q7Z443 1732 aa29.71■■■□□ 2.35
LINC01342-201ENST00000416774 SPATA31A5Q5VU36 1347 aa29.71■■■□□ 2.35
LINC01342-201ENST00000416774 SPATA31A7Q8IWB4 1347 aa29.71■■■□□ 2.35
LINC01342-201ENST00000416774 SCN11AQ9UI33 1791 aa29.7■■■□□ 2.35
LINC01342-201ENST00000416774 GLI3P10071 1580 aa29.7■■■□□ 2.35
LINC01342-201ENST00000416774 BTBD11A6QL63 1104 aa29.69■■■□□ 2.34
LINC01342-201ENST00000416774 CCT4P50991 539 aaKnown RBP29.69■■■□□ 2.34
LINC01342-201ENST00000416774 ANP32AP39687 249 aaKnown RBP29.68■■■□□ 2.34
LINC01342-201ENST00000416774 GCC1Q96CN9 775 aa29.68■■■□□ 2.34
LINC01342-201ENST00000416774 USP35Q9P2H5 1018 aa29.68■■■□□ 2.34
LINC01342-201ENST00000416774 N4BP2Q86UW6 1770 aaPredicted RBP29.68■■■□□ 2.34
LINC01342-201ENST00000416774 C8orf34Q49A92 452 aa29.67■■■□□ 2.34
LINC01342-201ENST00000416774 SPATA31A1Q5TZJ5 1347 aa29.67■■■□□ 2.34
LINC01342-201ENST00000416774 WDR17Q8IZU2 1322 aa29.66■■■□□ 2.34
LINC01342-201ENST00000416774 MEGF6O75095 1541 aa29.66■■■□□ 2.34
LINC01342-201ENST00000416774 TOM1L2Q6ZVM7 507 aa29.66■■■□□ 2.34
LINC01342-201ENST00000416774 G2E3Q7L622 706 aa29.66■■■□□ 2.34
LINC01342-201ENST00000416774 PXDNLA1KZ92 1463 aa29.65■■■□□ 2.34
LINC01342-201ENST00000416774 FLIIQ13045 1269 aa29.65■■■□□ 2.34
LINC01342-201ENST00000416774 FAM98CQ17RN3 349 aaKnown RBP29.64■■■□□ 2.34
LINC01342-201ENST00000416774 HDGFL1Q5TGJ6 251 aa29.64■■■□□ 2.34
LINC01342-201ENST00000416774 IFNL2Q8IZJ0 200 aa29.64■■■□□ 2.34
LINC01342-201ENST00000416774 HEG1Q9ULI3 1381 aa29.64■■■□□ 2.34
LINC01342-201ENST00000416774 PHKG2P15735 406 aa29.63■■■□□ 2.33
LINC01342-201ENST00000416774 PARP4Q9UKK3 1724 aaKnown RBP29.63■■■□□ 2.33
LINC01342-201ENST00000416774 RPAP2Q8IXW5 612 aaPredicted RBP29.63■■■□□ 2.33
LINC01342-201ENST00000416774 HSP90AB1P08238 724 aaKnown RBP29.62■■■□□ 2.33
LINC01342-201ENST00000416774 NUCB1Q02818 461 aa29.62■■■□□ 2.33
LINC01342-201ENST00000416774 ONECUT3O60422 494 aaPredicted RBP29.6■■■□□ 2.33
LINC01342-201ENST00000416774 MRC1P22897 1456 aa29.59■■■□□ 2.33
LINC01342-201ENST00000416774 A0A0G2JS52 829 aa29.59■■■□□ 2.33
LINC01342-201ENST00000416774 MYT1Q01538 1121 aa29.59■■■□□ 2.33
LINC01342-201ENST00000416774 SEPT12Q8IYM1 358 aa29.59■■■□□ 2.33
LINC01342-201ENST00000416774 KDM6AO15550 1401 aaPredicted RBP29.58■■■□□ 2.33
LINC01342-201ENST00000416774 FKBP5Q13451 457 aaPredicted RBP29.58■■■□□ 2.33
LINC01342-201ENST00000416774 SIRT2Q8IXJ6 389 aa29.58■■■□□ 2.33
LINC01342-201ENST00000416774 ANKRD44Q8N8A2 993 aa29.58■■■□□ 2.33
LINC01342-201ENST00000416774 DCAF5Q96JK2 942 aa29.57■■■□□ 2.32
LINC01342-201ENST00000416774 CARD10Q9BWT7 1032 aa29.57■■■□□ 2.32
LINC01342-201ENST00000416774 C1orf115Q9H7X2 142 aa29.57■■■□□ 2.32
LINC01342-201ENST00000416774 SLC52A2Q9HAB3 445 aa29.57■■■□□ 2.32
LINC01342-201ENST00000416774 THRAP3Q9Y2W1 955 aaKnown RBP29.57■■■□□ 2.32
LINC01342-201ENST00000416774 BARGINQ6ZT62 677 aa29.56■■■□□ 2.32
LINC01342-201ENST00000416774 ATP10DQ9P241 1426 aa29.56■■■□□ 2.32
LINC01342-201ENST00000416774 KCNQ3O43525 872 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms