RNA–Protein interactions for RNA: ENST00000416445.6

CALCOCO2-203, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CALCOCO2, Length 1,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-203ENST00000416445 KDRP35968 1356 aa13.13□□□□□ -0.31
CALCOCO2-203ENST00000416445 CHD4Q14839 1912 aa13.13□□□□□ -0.31
CALCOCO2-203ENST00000416445 LOC102724428A0A0B4J2F2 783 aa13.13□□□□□ -0.31
CALCOCO2-203ENST00000416445 SIK1P57059 783 aa13.13□□□□□ -0.31
CALCOCO2-203ENST00000416445 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-203ENST00000416445 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
CALCOCO2-203ENST00000416445 TJP1Q07157 1748 aa13.12□□□□□ -0.31
CALCOCO2-203ENST00000416445 MAP3K5Q99683 1374 aa13.12□□□□□ -0.31
CALCOCO2-203ENST00000416445 PHF14O94880 888 aa13.12□□□□□ -0.31
CALCOCO2-203ENST00000416445 HMOX1P09601 288 aa13.12□□□□□ -0.31
CALCOCO2-203ENST00000416445 YY1P25490 414 aa13.12□□□□□ -0.31
CALCOCO2-203ENST00000416445 SLC16A10Q8TF71 515 aa13.12□□□□□ -0.31
CALCOCO2-203ENST00000416445 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
CALCOCO2-203ENST00000416445 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
CALCOCO2-203ENST00000416445 SMARCC1Q92922 1105 aaPredicted RBP13.1□□□□□ -0.31
CALCOCO2-203ENST00000416445 ZNF831Q5JPB2 1677 aa13.1□□□□□ -0.31
CALCOCO2-203ENST00000416445 ADAMTS7Q9UKP4 1686 aa13.09□□□□□ -0.31
CALCOCO2-203ENST00000416445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.09□□□□□ -0.31
CALCOCO2-203ENST00000416445 ATP6V1AP38606 617 aa13.09□□□□□ -0.31
CALCOCO2-203ENST00000416445 PLEKHO1Q53GL0 409 aaPredicted RBP13.09□□□□□ -0.31
CALCOCO2-203ENST00000416445 PLEKHG2Q9H7P9 1386 aa13.08□□□□□ -0.31
CALCOCO2-203ENST00000416445 DCAF5Q96JK2 942 aa13.08□□□□□ -0.32
CALCOCO2-203ENST00000416445 AK7Q96M32 723 aa13.08□□□□□ -0.32
CALCOCO2-203ENST00000416445 LGR6Q9HBX8 967 aa13.08□□□□□ -0.32
CALCOCO2-203ENST00000416445 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
CALCOCO2-203ENST00000416445 ERVV-2B6SEH9 535 aa13.07□□□□□ -0.32
CALCOCO2-203ENST00000416445 GNPATO15228 680 aa13.07□□□□□ -0.32
CALCOCO2-203ENST00000416445 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.327e-12■□□□□ 11.1
CALCOCO2-203ENST00000416445 POLD1P28340 1107 aa13.07□□□□□ -0.32
CALCOCO2-203ENST00000416445 NFATC2IPQ8NCF5 419 aa13.07□□□□□ -0.32
CALCOCO2-203ENST00000416445 CABP4P57796 275 aa13.06□□□□□ -0.32
CALCOCO2-203ENST00000416445 AMOTQ4VCS5 1084 aa13.06□□□□□ -0.32
CALCOCO2-203ENST00000416445 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
CALCOCO2-203ENST00000416445 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
CALCOCO2-203ENST00000416445 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
CALCOCO2-203ENST00000416445 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
CALCOCO2-203ENST00000416445 CICQ96RK0 1608 aaPredicted RBP13.05□□□□□ -0.32
CALCOCO2-203ENST00000416445 NPC1L1Q9UHC9 1359 aa13.05□□□□□ -0.32
CALCOCO2-203ENST00000416445 MRC1P22897 1456 aa13.05□□□□□ -0.32
CALCOCO2-203ENST00000416445 SIPA1L3O60292 1781 aaPredicted RBP13.05□□□□□ -0.32
CALCOCO2-203ENST00000416445 N4BP2Q86UW6 1770 aaPredicted RBP13.05□□□□□ -0.32
CALCOCO2-203ENST00000416445 PELP1Q8IZL8 1130 aaKnown RBP13.05□□□□□ -0.32
CALCOCO2-203ENST00000416445 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
CALCOCO2-203ENST00000416445 KCPQ6ZWJ8 1503 aa13.04□□□□□ -0.32
CALCOCO2-203ENST00000416445 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
CALCOCO2-203ENST00000416445 KIF13BQ9NQT8 1826 aa13.03□□□□□ -0.32
CALCOCO2-203ENST00000416445 HSP90AB1P08238 724 aaKnown RBP13.03□□□□□ -0.32
CALCOCO2-203ENST00000416445 SSFA2P28290 1259 aa13.03□□□□□ -0.32
CALCOCO2-203ENST00000416445 SLC39A6Q13433 755 aa13.03□□□□□ -0.32
CALCOCO2-203ENST00000416445 GPR162Q16538 588 aa13.03□□□□□ -0.32
CALCOCO2-203ENST00000416445 C1orf141Q5JVX7 400 aa13.03□□□□□ -0.32
CALCOCO2-203ENST00000416445 RNMTO43148 476 aaKnown RBP13.02□□□□□ -0.33
CALCOCO2-203ENST00000416445 AKAP4Q5JQC9 854 aa13.02□□□□□ -0.33
CALCOCO2-203ENST00000416445 ZNF784Q8NCA9 323 aaPredicted RBP13.02□□□□□ -0.33
CALCOCO2-203ENST00000416445 FLAD1Q8NFF5 587 aa13.02□□□□□ -0.33
CALCOCO2-203ENST00000416445 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
CALCOCO2-203ENST00000416445 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
CALCOCO2-203ENST00000416445 PHACTR3Q96KR7 559 aa13.01□□□□□ -0.33
CALCOCO2-203ENST00000416445 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
CALCOCO2-203ENST00000416445 SRP68Q9UHB9 627 aaKnown RBP13.01□□□□□ -0.33
CALCOCO2-203ENST00000416445 CNTNAP4Q9C0A0 1308 aa13□□□□□ -0.33
CALCOCO2-203ENST00000416445 U2SURPO15042 1029 aaKnown RBP13□□□□□ -0.33
CALCOCO2-203ENST00000416445 CRKLP46109 303 aaKnown RBP13□□□□□ -0.33
CALCOCO2-203ENST00000416445 INTS5Q6P9B9 1019 aaKnown RBP13□□□□□ -0.33
CALCOCO2-203ENST00000416445 MMP10P09238 476 aa12.99□□□□□ -0.33
CALCOCO2-203ENST00000416445 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
CALCOCO2-203ENST00000416445 BRCA1P38398 1863 aaKnown RBP12.99□□□□□ -0.33
CALCOCO2-203ENST00000416445 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
CALCOCO2-203ENST00000416445 GYS1P13807 737 aa12.98□□□□□ -0.33
CALCOCO2-203ENST00000416445 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
CALCOCO2-203ENST00000416445 RC3H1Q5TC82 1133 aaKnown RBP12.98□□□□□ -0.33
CALCOCO2-203ENST00000416445 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
CALCOCO2-203ENST00000416445 RTCBQ9Y3I0 505 aaKnown RBP12.98□□□□□ -0.33
CALCOCO2-203ENST00000416445 CEP350Q5VT06 3117 aa12.98□□□□□ -0.33
CALCOCO2-203ENST00000416445 AFDNP55196 1824 aaKnown RBP12.98□□□□□ -0.33
CALCOCO2-203ENST00000416445 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
CALCOCO2-203ENST00000416445 RSPH6AQ9H0K4 717 aa12.97□□□□□ -0.33
CALCOCO2-203ENST00000416445 CD2APQ9Y5K6 639 aa12.97□□□□□ -0.33
CALCOCO2-203ENST00000416445 PXDNLA1KZ92 1463 aa12.97□□□□□ -0.33
CALCOCO2-203ENST00000416445 DLG5Q8TDM6 1919 aa12.97□□□□□ -0.33
CALCOCO2-203ENST00000416445 FKBP8Q14318 412 aa12.96□□□□□ -0.33
CALCOCO2-203ENST00000416445 KCNQ3O43525 872 aa12.96□□□□□ -0.34
CALCOCO2-203ENST00000416445 CYP19A1P11511 503 aaPredicted RBP12.96□□□□□ -0.34
CALCOCO2-203ENST00000416445 PRKAR2BP31323 418 aa12.96□□□□□ -0.34
CALCOCO2-203ENST00000416445 DDR1Q08345 913 aa12.96□□□□□ -0.34
CALCOCO2-203ENST00000416445 C10orf71Q711Q0 1435 aa12.95□□□□□ -0.34
CALCOCO2-203ENST00000416445 ZBTB1Q9Y2K1 713 aa12.94□□□□□ -0.34
CALCOCO2-203ENST00000416445 SOS1Q07889 1333 aaPredicted RBP12.93□□□□□ -0.34
CALCOCO2-203ENST00000416445 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
CALCOCO2-203ENST00000416445 A0A0G2JLW4 131 aa12.93□□□□□ -0.34
CALCOCO2-203ENST00000416445 RFC4P35249 363 aa12.93□□□□□ -0.34
CALCOCO2-203ENST00000416445 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
CALCOCO2-203ENST00000416445 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
CALCOCO2-203ENST00000416445 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
CALCOCO2-203ENST00000416445 DCTN1Q14203 1278 aa12.92□□□□□ -0.34
CALCOCO2-203ENST00000416445 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
CALCOCO2-203ENST00000416445 CEMIPQ8WUJ3 1361 aa12.92□□□□□ -0.34
CALCOCO2-203ENST00000416445 PRAMEF22A3QJZ6 481 aa12.91□□□□□ -0.34
CALCOCO2-203ENST00000416445 KCNA3P22001 575 aa12.91□□□□□ -0.34
CALCOCO2-203ENST00000416445 USPL1Q5W0Q7 1092 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms