RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 PGPEP1Q9NXJ5 209 aa5.57□□□□□ -1.52
APP-207ENST00000415997 ZNF142P52746 1687 aaPredicted RBP5.56□□□□□ -1.52
APP-207ENST00000415997 REREQ9P2R6 1566 aa5.56□□□□□ -1.52
APP-207ENST00000415997 CDC14CA4D256 554 aa5.56□□□□□ -1.52
APP-207ENST00000415997 CLK2P49760 499 aaKnown RBP5.56□□□□□ -1.52
APP-207ENST00000415997 RAB15P59190 212 aa5.56□□□□□ -1.52
APP-207ENST00000415997 ERFEQ4G0M1 354 aa5.56□□□□□ -1.52
APP-207ENST00000415997 AGBL1Q96MI9 1066 aa5.56□□□□□ -1.52
APP-207ENST00000415997 ARHGAP9Q9BRR9 750 aa5.56□□□□□ -1.52
APP-207ENST00000415997 COL25A1Q9BXS0 654 aaPredicted RBP5.56□□□□□ -1.52
APP-207ENST00000415997 SLC24A3Q9HC58 644 aa5.56□□□□□ -1.52
APP-207ENST00000415997 MAP4K5Q9Y4K4 846 aa5.56□□□□□ -1.52
APP-207ENST00000415997 KIF27Q86VH2 1401 aa5.56□□□□□ -1.52
APP-207ENST00000415997 VWDEQ8N2E2 1590 aa5.55□□□□□ -1.52
APP-207ENST00000415997 CFAP74Q9C0B2 1584 aa5.55□□□□□ -1.52
APP-207ENST00000415997 AGLP35573 1532 aa5.55□□□□□ -1.52
APP-207ENST00000415997 RELBQ01201 579 aa5.55□□□□□ -1.52
APP-207ENST00000415997 KRT76Q01546 638 aa5.55□□□□□ -1.52
APP-207ENST00000415997 ZBTB33Q86T24 672 aa5.55□□□□□ -1.52
APP-207ENST00000415997 TRMT44Q8IYL2 757 aaKnown RBP5.55□□□□□ -1.52
APP-207ENST00000415997 VWA5B2Q8N398 1253 aa5.55□□□□□ -1.52
APP-207ENST00000415997 TMEM151AQ8N4L1 468 aa5.55□□□□□ -1.52
APP-207ENST00000415997 CCDC155Q8N6L0 562 aa5.55□□□□□ -1.52
APP-207ENST00000415997 LRRN4Q8WUT4 740 aa5.55□□□□□ -1.52
APP-207ENST00000415997 KCTD15Q96SI1 283 aaPredicted RBP5.55□□□□□ -1.52
APP-207ENST00000415997 NEURL4Q96JN8 1562 aa5.55□□□□□ -1.52
APP-207ENST00000415997 GDF11O95390 407 aa5.54□□□□□ -1.52
APP-207ENST00000415997 KCNMA1Q12791 1236 aa5.54□□□□□ -1.52
APP-207ENST00000415997 SLC10A4Q96EP9 437 aa5.54□□□□□ -1.52
APP-207ENST00000415997 RSPH6AQ9H0K4 717 aa5.54□□□□□ -1.52
APP-207ENST00000415997 ZNF395Q9H8N7 513 aaPredicted RBP5.54□□□□□ -1.52
APP-207ENST00000415997 POLMQ9NP87 494 aaPredicted RBP5.54□□□□□ -1.52
APP-207ENST00000415997 ADAMTS8Q9UP79 889 aa5.54□□□□□ -1.52
APP-207ENST00000415997 CTSOP43234 321 aaPredicted RBP5.53□□□□□ -1.52
APP-207ENST00000415997 RASSF7Q02833 373 aa5.53□□□□□ -1.52
APP-207ENST00000415997 SUZ12Q15022 739 aaKnown RBP5.53□□□□□ -1.52
APP-207ENST00000415997 NR6A1Q15406 480 aa5.53□□□□□ -1.52
APP-207ENST00000415997 TUSC1Q2TAM9 212 aa5.53□□□□□ -1.52
APP-207ENST00000415997 SVOPQ8N4V2 548 aa5.53□□□□□ -1.52
APP-207ENST00000415997 INSM2Q96T92 566 aaPredicted RBP5.53□□□□□ -1.52
APP-207ENST00000415997 CNTLNQ9NXG0 1405 aa5.53□□□□□ -1.52
APP-207ENST00000415997 SETBP1Q9Y6X0 1596 aa5.53□□□□□ -1.52
APP-207ENST00000415997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.53□□□□□ -1.52
APP-207ENST00000415997 LRRC7Q96NW7 1537 aa5.53□□□□□ -1.52
APP-207ENST00000415997 MYO3AQ8NEV4 1616 aa5.52□□□□□ -1.53
APP-207ENST00000415997 RNF17Q9BXT8 1623 aaKnown RBP5.52□□□□□ -1.53
APP-207ENST00000415997 CDK12Q9NYV4 1490 aaPredicted RBP5.52□□□□□ -1.53
APP-207ENST00000415997 CEP170BQ9Y4F5 1589 aaPredicted RBP5.52□□□□□ -1.53
APP-207ENST00000415997 SPINT1O43278 529 aa5.52□□□□□ -1.53
APP-207ENST00000415997 RNFT1Q5M7Z0 435 aa5.52□□□□□ -1.53
APP-207ENST00000415997 PDXDC2PQ6P474 469 aa5.52□□□□□ -1.53
APP-207ENST00000415997 GPKOWQ92917 476 aaPredicted RBP eCLIP5.52□□□□□ -1.53
APP-207ENST00000415997 FKBPLQ9UIM3 349 aa5.52□□□□□ -1.53
APP-207ENST00000415997 GOLGA3Q08378 1498 aa5.51□□□□□ -1.53
APP-207ENST00000415997 KDM5CP41229 1560 aa5.51□□□□□ -1.53
APP-207ENST00000415997 Q6ZVU0 165 aa5.51□□□□□ -1.53
APP-207ENST00000415997 SV2AQ7L0J3 742 aa5.51□□□□□ -1.53
APP-207ENST00000415997 WHAMMQ8TF30 809 aa5.51□□□□□ -1.53
APP-207ENST00000415997 TMPRSS4Q9NRS4 437 aa5.51□□□□□ -1.53
APP-207ENST00000415997 DIP2CQ9Y2E4 1556 aa5.5□□□□□ -1.53
APP-207ENST00000415997 MROH2AA6NES4 1674 aa5.5□□□□□ -1.53
APP-207ENST00000415997 FAM135BQ49AJ0 1406 aa5.5□□□□□ -1.53
APP-207ENST00000415997 SCAPERQ9BY12 1400 aa5.5□□□□□ -1.53
APP-207ENST00000415997 SLC35F4A4IF30 521 aa5.5□□□□□ -1.53
APP-207ENST00000415997 AP1G2O75843 785 aa5.5□□□□□ -1.53
APP-207ENST00000415997 ITGA6P23229 1130 aa5.5□□□□□ -1.53
APP-207ENST00000415997 IRS1P35568 1242 aa5.5□□□□□ -1.53
APP-207ENST00000415997 GSK3AP49840 483 aa5.5□□□□□ -1.53
APP-207ENST00000415997 MARSP56192 900 aaKnown RBP5.5□□□□□ -1.53
APP-207ENST00000415997 PTK2Q05397 1052 aa5.5□□□□□ -1.53
APP-207ENST00000415997 DHX9Q08211 1270 aaKnown RBP5.5□□□□□ -1.53
APP-207ENST00000415997 INTS6LQ5JSJ4 861 aaKnown RBP5.5□□□□□ -1.53
APP-207ENST00000415997 ZNF385CQ66K41 422 aaPredicted RBP5.5□□□□□ -1.53
APP-207ENST00000415997 PROCA1Q8NCQ7 364 aaPredicted RBP5.5□□□□□ -1.53
APP-207ENST00000415997 RNF225M0QZC1 329 aaPredicted RBP5.49□□□□□ -1.53
APP-207ENST00000415997 CDV3Q9UKY7 258 aaKnown RBP5.49□□□□□ -1.53
APP-207ENST00000415997 STRCP1A6NGW2 1772 aa5.48□□□□□ -1.53
APP-207ENST00000415997 SYNMO15061 1565 aa5.48□□□□□ -1.53
APP-207ENST00000415997 MED14O60244 1454 aa5.48□□□□□ -1.53
APP-207ENST00000415997 ZMYM3Q14202 1370 aa5.48□□□□□ -1.53
APP-207ENST00000415997 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
APP-207ENST00000415997 GPAT2Q6NUI2 795 aa5.48□□□□□ -1.53
APP-207ENST00000415997 DZIP3Q86Y13 1208 aaKnown RBP5.48□□□□□ -1.53
APP-207ENST00000415997 ADAM32Q8TC27 787 aa5.48□□□□□ -1.53
APP-207ENST00000415997 NANOS1Q8WY41 292 aaKnown RBP5.48□□□□□ -1.53
APP-207ENST00000415997 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
APP-207ENST00000415997 LRP5O75197 1615 aa5.48□□□□□ -1.53
APP-207ENST00000415997 DNMT1P26358 1616 aaKnown RBP5.48□□□□□ -1.53
APP-207ENST00000415997 EP400Q96L91 3159 aa5.47□□□□□ -1.53
APP-207ENST00000415997 ARID3CA6NKF2 412 aa5.47□□□□□ -1.53
APP-207ENST00000415997 FBXO31Q5XUX0 539 aaPredicted RBP5.47□□□□□ -1.53
APP-207ENST00000415997 ZNF784Q8NCA9 323 aaPredicted RBP5.47□□□□□ -1.53
APP-207ENST00000415997 EPS8L1Q8TE68 723 aa5.47□□□□□ -1.53
APP-207ENST00000415997 POLR1AO95602 1720 aaPredicted RBP5.47□□□□□ -1.53
APP-207ENST00000415997 ABCA6Q8N139 1617 aa5.47□□□□□ -1.53
APP-207ENST00000415997 PLCH2O75038 1416 aa5.47□□□□□ -1.53
APP-207ENST00000415997 A2ML1A8K2U0 1454 aa5.46□□□□□ -1.53
APP-207ENST00000415997 NUP153P49790 1475 aaKnown RBP5.46□□□□□ -1.53
APP-207ENST00000415997 ZNF518AQ6AHZ1 1483 aa5.46□□□□□ -1.53
APP-207ENST00000415997 MLH3Q9UHC1 1453 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms