RNA–Protein interactions for RNA: ENST00000412453.2

HMGA1P5-201, Transcript of high mobility group AT-hook 1 pseudogene 5, humanhuman

BASIC

Gene HMGA1P5, Length 271 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P5-201ENST00000412453 SGIP1Q9BQI5 828 aa25.34■■□□□ 1.65
HMGA1P5-201ENST00000412453 VIRMAQ69YN4 1812 aaKnown RBP25.34■■□□□ 1.65
HMGA1P5-201ENST00000412453 COL24A1Q17RW2 1714 aa25.34■■□□□ 1.65
HMGA1P5-201ENST00000412453 ATP6V1AP38606 617 aa25.33■■□□□ 1.65
HMGA1P5-201ENST00000412453 MTHFSDQ2M296 383 aaKnown RBP25.32■■□□□ 1.64
HMGA1P5-201ENST00000412453 NFATC2IPQ8NCF5 419 aa25.31■■□□□ 1.64
HMGA1P5-201ENST00000412453 UBR3Q6ZT12 1888 aa25.3■■□□□ 1.64
HMGA1P5-201ENST00000412453 ADAMTS7Q9UKP4 1686 aa25.3■■□□□ 1.64
HMGA1P5-201ENST00000412453 MSH5O43196 834 aa25.3■■□□□ 1.64
HMGA1P5-201ENST00000412453 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
HMGA1P5-201ENST00000412453 COL23A1Q86Y22 540 aaPredicted RBP25.3■■□□□ 1.64
HMGA1P5-201ENST00000412453 GAS2L2Q8NHY3 880 aa25.3■■□□□ 1.64
HMGA1P5-201ENST00000412453 MRC1P22897 1456 aa25.29■■□□□ 1.64
HMGA1P5-201ENST00000412453 POLD1P28340 1107 aa25.29■■□□□ 1.64
HMGA1P5-201ENST00000412453 LINC00116Q8NCU8 138 aa25.29■■□□□ 1.64
HMGA1P5-201ENST00000412453 RBM42Q9BTD8 480 aaKnown RBP25.29■■□□□ 1.64
HMGA1P5-201ENST00000412453 RNMTO43148 476 aaKnown RBP25.28■■□□□ 1.64
HMGA1P5-201ENST00000412453 ITPK1Q13572 414 aa25.28■■□□□ 1.64
HMGA1P5-201ENST00000412453 ARXQ96QS3 562 aa25.28■■□□□ 1.64
HMGA1P5-201ENST00000412453 SLC52A2Q9HAB3 445 aa25.28■■□□□ 1.64
HMGA1P5-201ENST00000412453 SSFA2P28290 1259 aa25.26■■□□□ 1.63
HMGA1P5-201ENST00000412453 RSPH6AQ9H0K4 717 aa25.26■■□□□ 1.63
HMGA1P5-201ENST00000412453 LGR6Q9HBX8 967 aa25.26■■□□□ 1.63
HMGA1P5-201ENST00000412453 U2AF1L5P0DN76 240 aaPredicted RBP25.25■■□□□ 1.63
HMGA1P5-201ENST00000412453 U2AF1Q01081 240 aaKnown RBP eCLIP25.25■■□□□ 1.63
HMGA1P5-201ENST00000412453 MAP3K5Q99683 1374 aa25.25■■□□□ 1.63
HMGA1P5-201ENST00000412453 COL5A3P25940 1745 aaPredicted RBP25.25■■□□□ 1.63
HMGA1P5-201ENST00000412453 FCHSD2O94868 740 aa25.24■■□□□ 1.63
HMGA1P5-201ENST00000412453 PRKAR2BP31323 418 aa25.24■■□□□ 1.63
HMGA1P5-201ENST00000412453 DDX10Q13206 875 aaKnown RBP25.24■■□□□ 1.63
HMGA1P5-201ENST00000412453 SLC4A9Q96Q91 983 aa25.24■■□□□ 1.63
HMGA1P5-201ENST00000412453 CICQ96RK0 1608 aaPredicted RBP25.23■■□□□ 1.63
HMGA1P5-201ENST00000412453 DCAF8L1A6NGE4 600 aa25.23■■□□□ 1.63
HMGA1P5-201ENST00000412453 GNAT3A8MTJ3 354 aa25.23■■□□□ 1.63
HMGA1P5-201ENST00000412453 RALBP1Q15311 655 aa25.23■■□□□ 1.63
HMGA1P5-201ENST00000412453 FHDC1Q9C0D6 1143 aaPredicted RBP25.23■■□□□ 1.63
HMGA1P5-201ENST00000412453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.22■■□□□ 1.63
HMGA1P5-201ENST00000412453 GNPATO15228 680 aa25.22■■□□□ 1.63
HMGA1P5-201ENST00000412453 RC3H1Q5TC82 1133 aaKnown RBP25.22■■□□□ 1.63
HMGA1P5-201ENST00000412453 CNTNAP4Q9C0A0 1308 aa25.21■■□□□ 1.63
HMGA1P5-201ENST00000412453 PTCD1O75127 700 aaKnown RBP25.21■■□□□ 1.63
HMGA1P5-201ENST00000412453 SYT17Q9BSW7 474 aa25.21■■□□□ 1.63
HMGA1P5-201ENST00000412453 PHF14O94880 888 aa25.2■■□□□ 1.62
HMGA1P5-201ENST00000412453 PHACTR3Q96KR7 559 aa25.19■■□□□ 1.62
HMGA1P5-201ENST00000412453 RTCBQ9Y3I0 505 aaKnown RBP25.19■■□□□ 1.62
HMGA1P5-201ENST00000412453 AMIGO3Q86WK7 504 aa25.18■■□□□ 1.62
HMGA1P5-201ENST00000412453 TJP1Q07157 1748 aa25.17■■□□□ 1.62
HMGA1P5-201ENST00000412453 TEFQ10587 303 aa25.17■■□□□ 1.62
HMGA1P5-201ENST00000412453 ADRA2BP18089 450 aa25.16■■□□□ 1.62
HMGA1P5-201ENST00000412453 MSL1Q68DK7 614 aa25.16■■□□□ 1.62
HMGA1P5-201ENST00000412453 MYH14Q7Z406 1995 aaKnown RBP25.16■■□□□ 1.62
HMGA1P5-201ENST00000412453 SIPA1L3O60292 1781 aaPredicted RBP25.16■■□□□ 1.62
HMGA1P5-201ENST00000412453 RPS6KA4O75676 772 aa25.15■■□□□ 1.62
HMGA1P5-201ENST00000412453 NEFMP07197 916 aa25.15■■□□□ 1.62
HMGA1P5-201ENST00000412453 IL17REQ8NFR9 667 aa25.15■■□□□ 1.62
HMGA1P5-201ENST00000412453 UBR2Q8IWV8 1755 aa25.14■■□□□ 1.62
HMGA1P5-201ENST00000412453 SLC39A6Q13433 755 aa25.14■■□□□ 1.62
HMGA1P5-201ENST00000412453 TRAPPC3LQ5T215 181 aa25.14■■□□□ 1.62
HMGA1P5-201ENST00000412453 CEMIPQ8WUJ3 1361 aa25.14■■□□□ 1.61
HMGA1P5-201ENST00000412453 KCPQ6ZWJ8 1503 aa25.13■■□□□ 1.61
HMGA1P5-201ENST00000412453 TTC5Q8N0Z6 440 aa25.13■■□□□ 1.61
HMGA1P5-201ENST00000412453 CRKLP46109 303 aaKnown RBP25.12■■□□□ 1.61
HMGA1P5-201ENST00000412453 SMIM5Q71RC9 77 aa25.12■■□□□ 1.61
HMGA1P5-201ENST00000412453 VSIG10Q8N0Z9 540 aa25.12■■□□□ 1.61
HMGA1P5-201ENST00000412453 RTF1Q92541 710 aaKnown RBP25.12■■□□□ 1.61
HMGA1P5-201ENST00000412453 PNNQ9H307 717 aaKnown RBP25.12■■□□□ 1.61
HMGA1P5-201ENST00000412453 MYBBP1AQ9BQG0 1328 aaKnown RBP25.12■■□□□ 1.61
HMGA1P5-201ENST00000412453 KLHL34Q8N239 644 aa25.11■■□□□ 1.61
HMGA1P5-201ENST00000412453 HTATSF1O43719 755 aaKnown RBP25.1■■□□□ 1.61
HMGA1P5-201ENST00000412453 DNAJC10Q8IXB1 793 aa25.09■■□□□ 1.61
HMGA1P5-201ENST00000412453 RFC4P35249 363 aa25.08■■□□□ 1.61
HMGA1P5-201ENST00000412453 ARHGEF1Q92888 912 aaKnown RBP25.08■■□□□ 1.61
HMGA1P5-201ENST00000412453 C4AP0C0L4 1744 aa25.08■■□□□ 1.61
HMGA1P5-201ENST00000412453 ZNF790Q6PG37 636 aa25.07■■□□□ 1.6
HMGA1P5-201ENST00000412453 NLGN1Q8N2Q7 840 aa25.07■■□□□ 1.6
HMGA1P5-201ENST00000412453 CCDC87Q9NVE4 849 aa25.07■■□□□ 1.6
HMGA1P5-201ENST00000412453 CYP19A1P11511 503 aaPredicted RBP25.05■■□□□ 1.6
HMGA1P5-201ENST00000412453 INTS5Q6P9B9 1019 aaKnown RBP25.05■■□□□ 1.6
HMGA1P5-201ENST00000412453 PLEKHF1Q96S99 279 aa25.05■■□□□ 1.6
HMGA1P5-201ENST00000412453 CD2APQ9Y5K6 639 aa25.05■■□□□ 1.6
HMGA1P5-201ENST00000412453 DLG5Q8TDM6 1919 aa25.05■■□□□ 1.6
HMGA1P5-201ENST00000412453 BTBD11A6QL63 1104 aa25.04■■□□□ 1.6
HMGA1P5-201ENST00000412453 TEX13AQ9BXU3 409 aaPredicted RBP25.04■■□□□ 1.6
HMGA1P5-201ENST00000412453 MAPK8IP3Q9UPT6 1336 aa25.04■■□□□ 1.6
HMGA1P5-201ENST00000412453 MCM10Q7L590 875 aa25.03■■□□□ 1.6
HMGA1P5-201ENST00000412453 FMNL2Q96PY5 1086 aa25.03■■□□□ 1.6
HMGA1P5-201ENST00000412453 HEG1Q9ULI3 1381 aa25.03■■□□□ 1.6
HMGA1P5-201ENST00000412453 STARD3NLO95772 234 aa25.02■■□□□ 1.6
HMGA1P5-201ENST00000412453 ZNF496Q96IT1 587 aaPredicted RBP25.02■■□□□ 1.6
HMGA1P5-201ENST00000412453 GYS1P13807 737 aa25.01■■□□□ 1.59
HMGA1P5-201ENST00000412453 NLGN2Q8NFZ4 835 aa25.01■■□□□ 1.59
HMGA1P5-201ENST00000412453 MMP10P09238 476 aa25■■□□□ 1.59
HMGA1P5-201ENST00000412453 NFE2L2Q16236 605 aa25■■□□□ 1.59
HMGA1P5-201ENST00000412453 PRKRIP1Q9H875 184 aaPredicted RBP25■■□□□ 1.59
HMGA1P5-201ENST00000412453 SOS1Q07889 1333 aaPredicted RBP25■■□□□ 1.59
HMGA1P5-201ENST00000412453 USP42Q9H9J4 1324 aaKnown RBP25■■□□□ 1.59
HMGA1P5-201ENST00000412453 DCTN1Q14203 1278 aa24.98■■□□□ 1.59
HMGA1P5-201ENST00000412453 GPR162Q16538 588 aa24.98■■□□□ 1.59
HMGA1P5-201ENST00000412453 ZBTB1Q9Y2K1 713 aa24.98■■□□□ 1.59
HMGA1P5-201ENST00000412453 COL15A1P39059 1388 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms