RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 WASLO00401 505 aaPredicted RBP5.49□□□□□ -1.53
RNU6-1140P-201ENST00000410517 CTBSQ01459 385 aa5.49□□□□□ -1.53
RNU6-1140P-201ENST00000410517 AMHR2Q16671 573 aa5.49□□□□□ -1.53
RNU6-1140P-201ENST00000410517 WDR44Q5JSH3 913 aa5.49□□□□□ -1.53
RNU6-1140P-201ENST00000410517 TAS1R3Q7RTX0 852 aa5.49□□□□□ -1.53
RNU6-1140P-201ENST00000410517 DZIP3Q86Y13 1208 aaKnown RBP5.49□□□□□ -1.53
RNU6-1140P-201ENST00000410517 PLVAPQ9BX97 442 aa5.49□□□□□ -1.53
RNU6-1140P-201ENST00000410517 YBX3P16989 372 aaKnown RBP eCLIP5.48□□□□□ -1.53
RNU6-1140P-201ENST00000410517 CTDSPL2Q05D32 466 aa5.48□□□□□ -1.53
RNU6-1140P-201ENST00000410517 MCTP1Q6DN14 999 aa5.48□□□□□ -1.53
RNU6-1140P-201ENST00000410517 CHSY3Q70JA7 882 aa5.48□□□□□ -1.53
RNU6-1140P-201ENST00000410517 TRIM52Q96A61 297 aa5.48□□□□□ -1.53
RNU6-1140P-201ENST00000410517 ABHD17AQ96GS6 310 aa5.48□□□□□ -1.53
RNU6-1140P-201ENST00000410517 FGFR3P22607 806 aa5.47□□□□□ -1.53
RNU6-1140P-201ENST00000410517 TXKP42681 527 aa5.47□□□□□ -1.53
RNU6-1140P-201ENST00000410517 TRIM11Q96F44 468 aa5.47□□□□□ -1.53
RNU6-1140P-201ENST00000410517 ATXN7L1Q9ULK2 861 aaPredicted RBP5.47□□□□□ -1.53
RNU6-1140P-201ENST00000410517 ZC3H4Q9UPT8 1303 aaKnown RBP5.47□□□□□ -1.53
RNU6-1140P-201ENST00000410517 ESPNB1AK53 854 aa5.46□□□□□ -1.54
RNU6-1140P-201ENST00000410517 PAX4O43316 350 aa5.46□□□□□ -1.54
RNU6-1140P-201ENST00000410517 APBA3O96018 575 aa5.46□□□□□ -1.54
RNU6-1140P-201ENST00000410517 CSB-PGBD3P0DP91 1061 aa5.46□□□□□ -1.54
RNU6-1140P-201ENST00000410517 PHKA2P46019 1235 aa5.46□□□□□ -1.54
RNU6-1140P-201ENST00000410517 UBAP2LQ14157 1087 aaKnown RBP5.46□□□□□ -1.54
RNU6-1140P-201ENST00000410517 PGBD3Q8N328 593 aa5.46□□□□□ -1.54
RNU6-1140P-201ENST00000410517 LRRN4Q8WUT4 740 aa5.46□□□□□ -1.54
RNU6-1140P-201ENST00000410517 GPSM3Q9Y4H4 160 aa5.46□□□□□ -1.54
RNU6-1140P-201ENST00000410517 ARAFP10398 606 aa5.45□□□□□ -1.54
RNU6-1140P-201ENST00000410517 NR6A1Q15406 480 aa5.45□□□□□ -1.54
RNU6-1140P-201ENST00000410517 TUSC1Q2TAM9 212 aa5.45□□□□□ -1.54
RNU6-1140P-201ENST00000410517 MYSM1Q5VVJ2 828 aa5.45□□□□□ -1.54
RNU6-1140P-201ENST00000410517 PPP2R2DQ66LE6 453 aa5.45□□□□□ -1.54
RNU6-1140P-201ENST00000410517 RUBCNLQ9H714 662 aa5.45□□□□□ -1.54
RNU6-1140P-201ENST00000410517 BNIP3LO60238 219 aa5.44□□□□□ -1.54
RNU6-1140P-201ENST00000410517 CLN3Q13286 438 aa5.44□□□□□ -1.54
RNU6-1140P-201ENST00000410517 A0A1B0GTH6 734 aa5.43□□□□□ -1.54
RNU6-1140P-201ENST00000410517 LBRQ14739 615 aaKnown RBP5.43□□□□□ -1.54
RNU6-1140P-201ENST00000410517 PRRT3Q5FWE3 981 aa5.43□□□□□ -1.54
RNU6-1140P-201ENST00000410517 EFHC2Q5JST6 749 aa5.43□□□□□ -1.54
RNU6-1140P-201ENST00000410517 SEPT12Q8IYM1 358 aa5.43□□□□□ -1.54
RNU6-1140P-201ENST00000410517 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
RNU6-1140P-201ENST00000410517 SPDYE3A6NKU9 549 aa5.42□□□□□ -1.54
RNU6-1140P-201ENST00000410517 PARP9Q8IXQ6 854 aa5.42□□□□□ -1.54
RNU6-1140P-201ENST00000410517 ARHGEF10LQ9HCE6 1279 aa5.41□□□□□ -1.54
RNU6-1140P-201ENST00000410517 NDFIP2Q9NV92 336 aa5.41□□□□□ -1.54
RNU6-1140P-201ENST00000410517 ADH6P28332 368 aa5.4□□□□□ -1.54
RNU6-1140P-201ENST00000410517 MSX1P28360 303 aa5.4□□□□□ -1.54
RNU6-1140P-201ENST00000410517 FZD5Q13467 585 aa5.4□□□□□ -1.54
RNU6-1140P-201ENST00000410517 CC2D2BQ6DHV5 1058 aa5.4□□□□□ -1.54
RNU6-1140P-201ENST00000410517 CYP2U1Q7Z449 544 aa5.4□□□□□ -1.54
RNU6-1140P-201ENST00000410517 COL17A1Q9UMD9 1497 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1140P-201ENST00000410517 FAM229AH3BQW9 127 aa5.39□□□□□ -1.55
RNU6-1140P-201ENST00000410517 GIGYF1O75420 1035 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1140P-201ENST00000410517 H2AFB1P0C5Y9 115 aa5.39□□□□□ -1.55
RNU6-1140P-201ENST00000410517 H2AFB2P0C5Z0 115 aa5.39□□□□□ -1.55
RNU6-1140P-201ENST00000410517 FCHSD1Q86WN1 690 aa5.39□□□□□ -1.55
RNU6-1140P-201ENST00000410517 KLF15Q9UIH9 416 aa5.39□□□□□ -1.55
RNU6-1140P-201ENST00000410517 CLK2P49760 499 aaKnown RBP5.38□□□□□ -1.55
RNU6-1140P-201ENST00000410517 ERVK-9P63128 1117 aa5.38□□□□□ -1.55
RNU6-1140P-201ENST00000410517 CENPCQ03188 943 aa5.38□□□□□ -1.55
RNU6-1140P-201ENST00000410517 ERICH6Q7L0X2 663 aa5.38□□□□□ -1.55
RNU6-1140P-201ENST00000410517 NACC1Q96RE7 527 aa5.38□□□□□ -1.55
RNU6-1140P-201ENST00000410517 RAB6BQ9NRW1 208 aa5.38□□□□□ -1.55
RNU6-1140P-201ENST00000410517 PRKCSHP14314 528 aaPredicted RBP5.37□□□□□ -1.55
RNU6-1140P-201ENST00000410517 ELNP15502 786 aa5.37□□□□□ -1.55
RNU6-1140P-201ENST00000410517 GTF2E1P29083 439 aaPredicted RBP5.37□□□□□ -1.55
RNU6-1140P-201ENST00000410517 GNASQ5JWF2 1037 aa5.37□□□□□ -1.55
RNU6-1140P-201ENST00000410517 BARGINQ6ZT62 677 aa5.37□□□□□ -1.55
RNU6-1140P-201ENST00000410517 PNMA1Q8ND90 353 aa5.37□□□□□ -1.55
RNU6-1140P-201ENST00000410517 CNKSR1Q969H4 720 aa5.37□□□□□ -1.55
RNU6-1140P-201ENST00000410517 FMNL2Q96PY5 1086 aa5.37□□□□□ -1.55
RNU6-1140P-201ENST00000410517 ZSCAN10Q96SZ4 725 aaPredicted RBP5.37□□□□□ -1.55
RNU6-1140P-201ENST00000410517 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
RNU6-1140P-201ENST00000410517 ESF1Q9H501 851 aaKnown RBP5.37□□□□□ -1.55
RNU6-1140P-201ENST00000410517 PCBP4P57723 403 aaKnown RBP5.36□□□□□ -1.55
RNU6-1140P-201ENST00000410517 TRIM28Q13263 835 aaKnown RBP5.36□□□□□ -1.55
RNU6-1140P-201ENST00000410517 GRIK4Q16099 956 aa5.36□□□□□ -1.55
RNU6-1140P-201ENST00000410517 TMEM214Q6NUQ4 689 aaKnown RBP5.36□□□□□ -1.55
RNU6-1140P-201ENST00000410517 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.36□□□□□ -1.55
RNU6-1140P-201ENST00000410517 POLR3EQ9NVU0 708 aa5.36□□□□□ -1.55
RNU6-1140P-201ENST00000410517 PCDHGC4Q9Y5F7 938 aa5.36□□□□□ -1.55
RNU6-1140P-201ENST00000410517 SCTRP47872 440 aa5.35□□□□□ -1.55
RNU6-1140P-201ENST00000410517 C4orf17Q53FE4 359 aa5.35□□□□□ -1.55
RNU6-1140P-201ENST00000410517 FIGNL1Q6PIW4 674 aa5.35□□□□□ -1.55
RNU6-1140P-201ENST00000410517 EPS8L1Q8TE68 723 aa5.35□□□□□ -1.55
RNU6-1140P-201ENST00000410517 ESYT1Q9BSJ8 1104 aa5.35□□□□□ -1.55
RNU6-1140P-201ENST00000410517 ZCCHC2Q9C0B9 1178 aaKnown RBP5.35□□□□□ -1.55
RNU6-1140P-201ENST00000410517 CD33P20138 364 aa5.34□□□□□ -1.55
RNU6-1140P-201ENST00000410517 PRR12Q9ULL5 1215 aa5.34□□□□□ -1.55
RNU6-1140P-201ENST00000410517 PCDHB9Q9Y5E1 797 aa5.34□□□□□ -1.55
RNU6-1140P-201ENST00000410517 IL2RAP01589 272 aa5.33□□□□□ -1.56
RNU6-1140P-201ENST00000410517 ALAS2P22557 587 aa5.33□□□□□ -1.56
RNU6-1140P-201ENST00000410517 CRISPLD1Q9H336 500 aa5.33□□□□□ -1.56
RNU6-1140P-201ENST00000410517 OSBPL3Q9H4L5 887 aa5.33□□□□□ -1.56
RNU6-1140P-201ENST00000410517 AVENQ9NQS1 362 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1140P-201ENST00000410517 DCDC2BA2VCK2 349 aa5.32□□□□□ -1.56
RNU6-1140P-201ENST00000410517 ATXN7O15265 892 aaPredicted RBP5.32□□□□□ -1.56
RNU6-1140P-201ENST00000410517 TRAK2O60296 914 aa5.32□□□□□ -1.56
RNU6-1140P-201ENST00000410517 RNF20Q5VTR2 975 aa5.32□□□□□ -1.56
RNU6-1140P-201ENST00000410517 CCDC125Q86Z20 511 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms