RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 C4orf17Q53FE4 359 aa4.56□□□□□ -1.68
RNU2-54P-201ENST00000410299 ESCO1Q5FWF5 840 aa4.56□□□□□ -1.68
RNU2-54P-201ENST00000410299 WDR44Q5JSH3 913 aa4.56□□□□□ -1.68
RNU2-54P-201ENST00000410299 SIRT1Q96EB6 747 aa4.56□□□□□ -1.68
RNU2-54P-201ENST00000410299 GPAMQ9HCL2 828 aa4.56□□□□□ -1.68
RNU2-54P-201ENST00000410299 ADAMTS2O95450 1211 aa4.55□□□□□ -1.68
RNU2-54P-201ENST00000410299 F11P03951 625 aa4.55□□□□□ -1.68
RNU2-54P-201ENST00000410299 SLURP2P0DP57 97 aa4.55□□□□□ -1.68
RNU2-54P-201ENST00000410299 SKIP12755 728 aa4.55□□□□□ -1.68
RNU2-54P-201ENST00000410299 GDF10P55107 478 aa4.55□□□□□ -1.68
RNU2-54P-201ENST00000410299 RASSF7Q02833 373 aa4.55□□□□□ -1.68
RNU2-54P-201ENST00000410299 TLR1Q15399 786 aa4.55□□□□□ -1.68
RNU2-54P-201ENST00000410299 GNASQ5JWF2 1037 aa4.55□□□□□ -1.68
RNU2-54P-201ENST00000410299 ZNF385CQ66K41 422 aaPredicted RBP4.55□□□□□ -1.68
RNU2-54P-201ENST00000410299 WWC1Q8IX03 1113 aa4.55□□□□□ -1.68
RNU2-54P-201ENST00000410299 ADAMTS19Q8TE59 1207 aa4.55□□□□□ -1.68
RNU2-54P-201ENST00000410299 H7C1W4 665 aa4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 INHAP05111 366 aa4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 THBS1P07996 1170 aa4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 GTF2E1P29083 439 aaPredicted RBP4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 GPAT2Q6NUI2 795 aa4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 FOXR1Q6PIV2 292 aa4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 PPARGC1BQ86YN6 1023 aaKnown RBP4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 DEPDC4Q8N2C3 294 aa4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 SVOPQ8N4V2 548 aa4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 CLUAP1Q96AJ1 413 aa4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 GMCL1Q96IK5 515 aa4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 NUCKS1Q9H1E3 243 aaKnown RBP4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 SERTAD1Q9UHV2 236 aa4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 PCDHGA11Q9Y5H2 935 aa4.54□□□□□ -1.68
RNU2-54P-201ENST00000410299 A0A1B0GTH6 734 aa4.53□□□□□ -1.68
RNU2-54P-201ENST00000410299 TMEM229AB2RXF0 380 aa4.53□□□□□ -1.68
RNU2-54P-201ENST00000410299 MSX1P28360 303 aa4.53□□□□□ -1.68
RNU2-54P-201ENST00000410299 SRSF11Q05519 484 aaKnown RBP4.53□□□□□ -1.68
RNU2-54P-201ENST00000410299 NCOA4Q13772 614 aa4.53□□□□□ -1.68
RNU2-54P-201ENST00000410299 EML3Q32P44 896 aa4.53□□□□□ -1.68
RNU2-54P-201ENST00000410299 HDGFL1Q5TGJ6 251 aa4.53□□□□□ -1.68
RNU2-54P-201ENST00000410299 RHBDD1Q8TEB9 315 aa4.53□□□□□ -1.68
RNU2-54P-201ENST00000410299 RUBCNLQ9H714 662 aa4.53□□□□□ -1.68
RNU2-54P-201ENST00000410299 ADAMTS8Q9UP79 889 aa4.53□□□□□ -1.68
RNU2-54P-201ENST00000410299 USP17L5A8MUK1 530 aa4.52□□□□□ -1.69
RNU2-54P-201ENST00000410299 PLA2G4AP47712 749 aa4.52□□□□□ -1.69
RNU2-54P-201ENST00000410299 SMTNP53814 917 aa4.52□□□□□ -1.69
RNU2-54P-201ENST00000410299 GTF2IP78347 998 aa4.52□□□□□ -1.69
RNU2-54P-201ENST00000410299 LYPD4Q6UWN0 246 aa4.52□□□□□ -1.69
RNU2-54P-201ENST00000410299 NFATC2IPQ8NCF5 419 aa4.52□□□□□ -1.69
RNU2-54P-201ENST00000410299 TRERF1Q96PN7 1200 aa4.52□□□□□ -1.69
RNU2-54P-201ENST00000410299 MBIPQ9NS73 344 aa4.52□□□□□ -1.69
RNU2-54P-201ENST00000410299 NOD1Q9Y239 953 aa4.52□□□□□ -1.69
RNU2-54P-201ENST00000410299 IGF1RP08069 1367 aa4.52□□□□□ -1.69
RNU2-54P-201ENST00000410299 ARHGEF15O94989 841 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 IGHA1P01876 353 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 CELA2BP08218 269 aaPredicted RBP4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 CSB-PGBD3P0DP91 1061 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 GSK3AP49840 483 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 PSME1Q06323 249 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 XP32Q5T750 250 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 TBC1D9Q6ZT07 1266 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 PGBD3Q8N328 593 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 AIDAQ96BJ3 306 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 SLC4A9Q96Q91 983 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 UCN2Q96RP3 112 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 NIFKQ9BYG3 293 aaKnown RBP4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 USP3Q9Y6I4 520 aa4.51□□□□□ -1.69
RNU2-54P-201ENST00000410299 A6NJY4 79 aa4.5□□□□□ -1.69
RNU2-54P-201ENST00000410299 LZTS3O60299 673 aaPredicted RBP4.5□□□□□ -1.69
RNU2-54P-201ENST00000410299 MX2P20592 715 aa4.5□□□□□ -1.69
RNU2-54P-201ENST00000410299 UBAP2LQ14157 1087 aaKnown RBP4.5□□□□□ -1.69
RNU2-54P-201ENST00000410299 ZNF295-AS1Q8N0V1 137 aa4.5□□□□□ -1.69
RNU2-54P-201ENST00000410299 FNBP4Q8N3X1 1017 aaPredicted RBP4.5□□□□□ -1.69
RNU2-54P-201ENST00000410299 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.5□□□□□ -1.69
RNU2-54P-201ENST00000410299 IQSEC3Q9UPP2 1182 aaPredicted RBP4.5□□□□□ -1.69
RNU2-54P-201ENST00000410299 USP17L3A6NCW0 530 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 USP17L4A6NCW7 530 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 CDK2AP1O14519 115 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 ATP9BO43861 1147 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 ATP4AP20648 1035 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 MAP3K10Q02779 954 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 MTFR1Q15390 333 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 EFHC2Q5JST6 749 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 USP17L2Q6R6M4 530 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 USP17L1Q7RTZ2 530 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 PROSER2Q86WR7 435 aaPredicted RBP4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 ACDQ96AP0 544 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 ABHD17AQ96GS6 310 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 ZNF358Q9NW07 568 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 CABP1Q9NZU7 370 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 KIAA1024Q9UPX6 916 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 PARP3Q9Y6F1 533 aa4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 DNMT3AQ9Y6K1 912 aaPredicted RBP4.49□□□□□ -1.69
RNU2-54P-201ENST00000410299 BACH1O14867 736 aa4.48□□□□□ -1.69
RNU2-54P-201ENST00000410299 ZBTB7BO15156 539 aaPredicted RBP4.48□□□□□ -1.69
RNU2-54P-201ENST00000410299 CLDN10P78369 228 aa4.48□□□□□ -1.69
RNU2-54P-201ENST00000410299 FOXK2Q01167 660 aa4.48□□□□□ -1.69
RNU2-54P-201ENST00000410299 LBRQ14739 615 aaKnown RBP4.48□□□□□ -1.69
RNU2-54P-201ENST00000410299 ARSJQ5FYB0 599 aaPredicted RBP4.48□□□□□ -1.69
RNU2-54P-201ENST00000410299 TBCELQ5QJ74 424 aa4.48□□□□□ -1.69
RNU2-54P-201ENST00000410299 PLEKHM2Q8IWE5 1019 aa4.48□□□□□ -1.69
RNU2-54P-201ENST00000410299 TNS4Q8IZW8 715 aa4.48□□□□□ -1.69
RNU2-54P-201ENST00000410299 TPCN2Q8NHX9 752 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms