RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 MAP3K5Q99683 1374 aa19.56■□□□□ 0.72
HOXD3-202ENST00000410016 ARXQ96QS3 562 aa19.56■□□□□ 0.72
HOXD3-202ENST00000410016 EXOC6BQ9Y2D4 811 aa19.56■□□□□ 0.72
HOXD3-202ENST00000410016 GNAI3P08754 354 aa19.56■□□□□ 0.72
HOXD3-202ENST00000410016 PNMA6EA0A0J9YXQ4 647 aa19.55■□□□□ 0.72
HOXD3-202ENST00000410016 REC8O95072 547 aa19.55■□□□□ 0.72
HOXD3-202ENST00000410016 MRE11P49959 708 aa19.55■□□□□ 0.72
HOXD3-202ENST00000410016 ATP8B2P98198 1209 aa19.55■□□□□ 0.72
HOXD3-202ENST00000410016 NECTIN2Q92692 538 aa19.55■□□□□ 0.72
HOXD3-202ENST00000410016 ERC2O15083 957 aa19.55■□□□□ 0.72
HOXD3-202ENST00000410016 USP54Q70EL1 1684 aa19.54■□□□□ 0.72
HOXD3-202ENST00000410016 SKOR2Q2VWA4 1001 aaPredicted RBP19.54■□□□□ 0.72
HOXD3-202ENST00000410016 LTV1Q96GA3 475 aaPredicted RBP19.54■□□□□ 0.72
HOXD3-202ENST00000410016 ISY1Q9ULR0 285 aaKnown RBP19.54■□□□□ 0.72
HOXD3-202ENST00000410016 PTMSP20962 102 aa19.52■□□□□ 0.72
HOXD3-202ENST00000410016 LRRCC1Q9C099 1032 aa19.52■□□□□ 0.72
HOXD3-202ENST00000410016 USP44Q9H0E7 712 aa19.52■□□□□ 0.72
HOXD3-202ENST00000410016 CYP2E1P05181 493 aaPredicted RBP19.52■□□□□ 0.72
HOXD3-202ENST00000410016 IBTKQ9P2D0 1353 aaPredicted RBP19.52■□□□□ 0.72
HOXD3-202ENST00000410016 FAM208AQ9UK61 1670 aaKnown RBP19.52■□□□□ 0.71
HOXD3-202ENST00000410016 TSHZ3Q63HK5 1081 aa19.51■□□□□ 0.71
HOXD3-202ENST00000410016 GRPEL1Q9HAV7 217 aa19.51■□□□□ 0.71
HOXD3-202ENST00000410016 FER1L4A9Z1Z3 1794 aa19.51■□□□□ 0.71
HOXD3-202ENST00000410016 BAG4O95429 457 aaKnown RBP19.51■□□□□ 0.71
HOXD3-202ENST00000410016 USHBP1Q8N6Y0 703 aa19.51■□□□□ 0.71
HOXD3-202ENST00000410016 CEMIPQ8WUJ3 1361 aa19.5■□□□□ 0.71
HOXD3-202ENST00000410016 GAS2L3Q86XJ1 694 aa19.5■□□□□ 0.71
HOXD3-202ENST00000410016 LRRFIP2Q9Y608 721 aaKnown RBP19.5■□□□□ 0.71
HOXD3-202ENST00000410016 IP6K1Q92551 441 aa19.5■□□□□ 0.71
HOXD3-202ENST00000410016 PHF8Q9UPP1 1060 aa19.5■□□□□ 0.71
HOXD3-202ENST00000410016 ST18O60284 1047 aa19.49■□□□□ 0.71
HOXD3-202ENST00000410016 MX1P20591 662 aa19.49■□□□□ 0.71
HOXD3-202ENST00000410016 RRAGDQ9NQL2 400 aaPredicted RBP19.49■□□□□ 0.71
HOXD3-202ENST00000410016 STAP2Q9UGK3 403 aa19.49■□□□□ 0.71
HOXD3-202ENST00000410016 PHAXQ9H814 394 aaKnown RBP19.49■□□□□ 0.71
HOXD3-202ENST00000410016 NUCB2P80303 420 aa19.48■□□□□ 0.71
HOXD3-202ENST00000410016 HDGFL1Q5TGJ6 251 aa19.48■□□□□ 0.71
HOXD3-202ENST00000410016 CWC22Q9HCG8 908 aaKnown RBP19.48■□□□□ 0.71
HOXD3-202ENST00000410016 PXDNLA1KZ92 1463 aa19.48■□□□□ 0.71
HOXD3-202ENST00000410016 NBPF6Q5VWK0 638 aa19.48■□□□□ 0.71
HOXD3-202ENST00000410016 NBPF4Q96M43 638 aa19.48■□□□□ 0.71
HOXD3-202ENST00000410016 CACNA1FO60840 1977 aa19.47■□□□□ 0.71
HOXD3-202ENST00000410016 PKP1Q13835 747 aa19.47■□□□□ 0.71
HOXD3-202ENST00000410016 ESYT1Q9BSJ8 1104 aa19.47■□□□□ 0.71
HOXD3-202ENST00000410016 SSH3Q8TE77 659 aa19.47■□□□□ 0.71
HOXD3-202ENST00000410016 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
HOXD3-202ENST00000410016 ZGPATQ8N5A5 531 aaKnown RBP19.46■□□□□ 0.71
HOXD3-202ENST00000410016 GOLGA6L22H0YM25 854 aa19.46■□□□□ 0.71
HOXD3-202ENST00000410016 EIF4A1P60842 406 aaKnown RBP19.46■□□□□ 0.71
HOXD3-202ENST00000410016 LGR6Q9HBX8 967 aa19.46■□□□□ 0.71
HOXD3-202ENST00000410016 UBTFL1P0CB47 393 aaPredicted RBP19.45■□□□□ 0.7
HOXD3-202ENST00000410016 CHMLP26374 656 aa19.45■□□□□ 0.7
HOXD3-202ENST00000410016 KLHL40Q2TBA0 621 aa19.45■□□□□ 0.7
HOXD3-202ENST00000410016 SRCIN1Q9C0H9 1055 aa19.44■□□□□ 0.7
HOXD3-202ENST00000410016 NFAT5O94916 1531 aa19.44■□□□□ 0.7
HOXD3-202ENST00000410016 TUBGCP6Q96RT7 1819 aa19.44■□□□□ 0.7
HOXD3-202ENST00000410016 RBM33Q96EV2 1170 aaKnown RBP19.43■□□□□ 0.7
HOXD3-202ENST00000410016 ZDHHC9Q9Y397 364 aa19.43■□□□□ 0.7
HOXD3-202ENST00000410016 N4BP2Q86UW6 1770 aaPredicted RBP19.43■□□□□ 0.7
HOXD3-202ENST00000410016 POLA2Q14181 598 aa19.43■□□□□ 0.7
HOXD3-202ENST00000410016 UNC5CLQ8IV45 518 aa19.43■□□□□ 0.7
HOXD3-202ENST00000410016 MED1Q15648 1581 aaPredicted RBP19.43■□□□□ 0.7
HOXD3-202ENST00000410016 HOXB7P09629 217 aa19.42■□□□□ 0.7
HOXD3-202ENST00000410016 NEK4P51957 841 aa19.42■□□□□ 0.7
HOXD3-202ENST00000410016 IL17RAQ96F46 866 aa19.42■□□□□ 0.7
HOXD3-202ENST00000410016 DDX49Q9Y6V7 483 aaKnown RBP19.42■□□□□ 0.7
HOXD3-202ENST00000410016 AK9Q5TCS8 1911 aa19.41■□□□□ 0.7
HOXD3-202ENST00000410016 AOX1Q06278 1338 aa19.41■□□□□ 0.7
HOXD3-202ENST00000410016 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
HOXD3-202ENST00000410016 PPP1R42Q7Z4L9 355 aa19.41■□□□□ 0.7
HOXD3-202ENST00000410016 RILPL2Q969X0 211 aa19.41■□□□□ 0.7
HOXD3-202ENST00000410016 LMBRD1Q9NUN5 540 aa19.41■□□□□ 0.7
HOXD3-202ENST00000410016 PALD1Q9ULE6 856 aa19.41■□□□□ 0.7
HOXD3-202ENST00000410016 TRIM6-TRIM34B2RNG4 842 aa19.41■□□□□ 0.7
HOXD3-202ENST00000410016 KCNQ3O43525 872 aa19.41■□□□□ 0.7
HOXD3-202ENST00000410016 MCTP1Q6DN14 999 aa19.41■□□□□ 0.7
HOXD3-202ENST00000410016 IL1RAPL2Q9NP60 686 aa19.41■□□□□ 0.7
HOXD3-202ENST00000410016 LTN1O94822 1766 aa19.4■□□□□ 0.7
HOXD3-202ENST00000410016 ANKLE2Q86XL3 938 aa19.4■□□□□ 0.7
HOXD3-202ENST00000410016 RAB11FIP3O75154 756 aa19.4■□□□□ 0.7
HOXD3-202ENST00000410016 NBPF7P0C2Y1 421 aaPredicted RBP19.4■□□□□ 0.7
HOXD3-202ENST00000410016 ANAPC15P60006 121 aa19.4■□□□□ 0.7
HOXD3-202ENST00000410016 BEND3Q5T5X7 828 aa19.4■□□□□ 0.7
HOXD3-202ENST00000410016 TMX3Q96JJ7 454 aa19.4■□□□□ 0.7
HOXD3-202ENST00000410016 CHPF2Q9P2E5 772 aa19.4■□□□□ 0.7
HOXD3-202ENST00000410016 PSME1Q06323 249 aa19.39■□□□□ 0.69
HOXD3-202ENST00000410016 KCNH5Q8NCM2 988 aa19.39■□□□□ 0.69
HOXD3-202ENST00000410016 CHD2O14647 1828 aaKnown RBP19.39■□□□□ 0.69
HOXD3-202ENST00000410016 ESCO1Q5FWF5 840 aa19.39■□□□□ 0.69
HOXD3-202ENST00000410016 PI4KAP2A4QPH2 592 aa19.38■□□□□ 0.69
HOXD3-202ENST00000410016 SURF6O75683 361 aaKnown RBP19.38■□□□□ 0.69
HOXD3-202ENST00000410016 PI4KAP1Q8N8J0 262 aa19.38■□□□□ 0.69
HOXD3-202ENST00000410016 LRRC59Q96AG4 307 aaKnown RBP19.38■□□□□ 0.69
HOXD3-202ENST00000410016 IL25Q9H293 177 aa19.38■□□□□ 0.69
HOXD3-202ENST00000410016 ANO2Q9NQ90 1003 aa19.38■□□□□ 0.69
HOXD3-202ENST00000410016 MCM2P49736 904 aa19.37■□□□□ 0.69
HOXD3-202ENST00000410016 AKAP4Q5JQC9 854 aa19.37■□□□□ 0.69
HOXD3-202ENST00000410016 RHPN1Q8TCX5 695 aa19.37■□□□□ 0.69
HOXD3-202ENST00000410016 DNAAF4Q8WXU2 420 aa19.37■□□□□ 0.69
HOXD3-202ENST00000410016 CUL4AQ13619 759 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms