RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 BACH1O14867 736 aa8.94□□□□□ -0.98
LSM5-206ENST00000409987 ADH1AP07327 375 aa8.94□□□□□ -0.98
LSM5-206ENST00000409987 ITPKCQ96DU7 683 aa8.94□□□□□ -0.98
LSM5-206ENST00000409987 ARHGEF10LQ9HCE6 1279 aa8.94□□□□□ -0.98
LSM5-206ENST00000409987 TOR4AQ9NXH8 423 aa8.94□□□□□ -0.98
LSM5-206ENST00000409987 IL2RAP01589 272 aa8.93□□□□□ -0.98
LSM5-206ENST00000409987 FKBP5Q13451 457 aaPredicted RBP8.93□□□□□ -0.98
LSM5-206ENST00000409987 TRIM67Q6ZTA4 783 aa8.93□□□□□ -0.98
LSM5-206ENST00000409987 TTC24A2A3L6 582 aaPredicted RBP8.92□□□□□ -0.98
LSM5-206ENST00000409987 C21orf2O43822 256 aa8.92□□□□□ -0.98
LSM5-206ENST00000409987 ZIC2O95409 532 aaPredicted RBP8.92□□□□□ -0.98
LSM5-206ENST00000409987 IGFBP4P22692 258 aa8.92□□□□□ -0.98
LSM5-206ENST00000409987 ESCO1Q5FWF5 840 aa8.92□□□□□ -0.98
LSM5-206ENST00000409987 CAPN12Q6ZSI9 719 aa8.92□□□□□ -0.98
LSM5-206ENST00000409987 Q6ZVU0 165 aa8.92□□□□□ -0.98
LSM5-206ENST00000409987 CYP4X1Q8N118 509 aa8.92□□□□□ -0.98
LSM5-206ENST00000409987 XAGE2Q96GT9 111 aa8.92□□□□□ -0.98
LSM5-206ENST00000409987 MKNK1Q9BUB5 465 aa8.92□□□□□ -0.98
LSM5-206ENST00000409987 TSPAN10Q9H1Z9 355 aaPredicted RBP8.92□□□□□ -0.98
LSM5-206ENST00000409987 ZFAND3Q9H8U3 227 aa8.92□□□□□ -0.98
LSM5-206ENST00000409987 SOWAHDA6NJG2 315 aa8.91□□□□□ -0.98
LSM5-206ENST00000409987 TIMP2P16035 220 aa8.91□□□□□ -0.98
LSM5-206ENST00000409987 SMPD1P17405 629 aa8.91□□□□□ -0.98
LSM5-206ENST00000409987 WDR4P57081 412 aaKnown RBP8.91□□□□□ -0.98
LSM5-206ENST00000409987 RGS22Q8NE09 1264 aa8.91□□□□□ -0.98
LSM5-206ENST00000409987 SCG3Q8WXD2 468 aaKnown RBP8.91□□□□□ -0.98
LSM5-206ENST00000409987 SEPT3Q9UH03 358 aa8.91□□□□□ -0.98
LSM5-206ENST00000409987 A6NJY4 79 aa8.9□□□□□ -0.98
LSM5-206ENST00000409987 SMTNP53814 917 aa8.9□□□□□ -0.98
LSM5-206ENST00000409987 FOXK2Q01167 660 aa8.9□□□□□ -0.98
LSM5-206ENST00000409987 CCDC27Q2M243 656 aa8.9□□□□□ -0.98
LSM5-206ENST00000409987 AGBL1Q96MI9 1066 aa8.9□□□□□ -0.98
LSM5-206ENST00000409987 MTMR7Q9Y216 660 aa8.9□□□□□ -0.98
LSM5-206ENST00000409987 HRH3Q9Y5N1 445 aa8.9□□□□□ -0.98
LSM5-206ENST00000409987 ATAD2Q6PL18 1390 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 A0A1W2PRU2 124 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 FOXO3O43524 673 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 PTGIRP43119 386 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 PRR20EP86478 221 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 PRR20CP86479 221 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 PRR20DP86480 221 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 PRR20BP86481 221 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 PRR20AP86496 221 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 MTFR1Q15390 333 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 TBCELQ5QJ74 424 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 CNKSR1Q969H4 720 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 SCHIP1Q9P0W5 487 aaPredicted RBP8.89□□□□□ -0.99
LSM5-206ENST00000409987 USP3Q9Y6I4 520 aa8.89□□□□□ -0.99
LSM5-206ENST00000409987 ABL1P00519 1130 aa8.88□□□□□ -0.99
LSM5-206ENST00000409987 CLN3Q13286 438 aa8.88□□□□□ -0.99
LSM5-206ENST00000409987 ZNF211Q13398 564 aaPredicted RBP8.88□□□□□ -0.99
LSM5-206ENST00000409987 SLC9A9Q8IVB4 645 aa8.88□□□□□ -0.99
LSM5-206ENST00000409987 ESYT1Q9BSJ8 1104 aa8.88□□□□□ -0.99
LSM5-206ENST00000409987 PTCD1O75127 700 aaKnown RBP8.87□□□□□ -0.99
LSM5-206ENST00000409987 TLR1Q15399 786 aa8.87□□□□□ -0.99
LSM5-206ENST00000409987 GTF3C2Q8WUA4 911 aaPredicted RBP8.87□□□□□ -0.99
LSM5-206ENST00000409987 HPS1Q92902 700 aa8.87□□□□□ -0.99
LSM5-206ENST00000409987 COL26A1Q96A83 441 aa8.87□□□□□ -0.99
LSM5-206ENST00000409987 IRX2Q9BZI1 471 aaPredicted RBP8.87□□□□□ -0.99
LSM5-206ENST00000409987 ANO2Q9NQ90 1003 aa8.87□□□□□ -0.99
LSM5-206ENST00000409987 EGFL7Q9UHF1 273 aa8.87□□□□□ -0.99
LSM5-206ENST00000409987 IQSEC3Q9UPP2 1182 aaPredicted RBP8.87□□□□□ -0.99
LSM5-206ENST00000409987 PPP1R12BO60237 982 aaPredicted RBP8.86□□□□□ -0.99
LSM5-206ENST00000409987 RELBQ01201 579 aa8.86□□□□□ -0.99
LSM5-206ENST00000409987 CHMP7Q8WUX9 453 aaPredicted RBP8.86□□□□□ -0.99
LSM5-206ENST00000409987 FHDC1Q9C0D6 1143 aaPredicted RBP8.86□□□□□ -0.99
LSM5-206ENST00000409987 DNMT3AQ9Y6K1 912 aaPredicted RBP8.86□□□□□ -0.99
LSM5-206ENST00000409987 MEN1O00255 615 aa8.85□□□□□ -0.99
LSM5-206ENST00000409987 CDK2AP1O14519 115 aa8.85□□□□□ -0.99
LSM5-206ENST00000409987 NAA30Q147X3 362 aaPredicted RBP8.85□□□□□ -0.99
LSM5-206ENST00000409987 MEIOBQ8N635 442 aa8.85□□□□□ -0.99
LSM5-206ENST00000409987 ZNF395Q9H8N7 513 aaPredicted RBP8.85□□□□□ -0.99
LSM5-206ENST00000409987 H3BRB1 525 aa8.84□□□□□ -0.99
LSM5-206ENST00000409987 ICMTO60725 284 aa8.84□□□□□ -0.99
LSM5-206ENST00000409987 CENPCQ03188 943 aa8.84□□□□□ -0.99
LSM5-206ENST00000409987 MTMR3Q13615 1198 aa8.84□□□□□ -0.99
LSM5-206ENST00000409987 STAG2Q8N3U4 1231 aa8.84□□□□□ -0.99
LSM5-206ENST00000409987 C2orf49Q9BVC5 232 aaPredicted RBP8.84□□□□□ -0.99
LSM5-206ENST00000409987 TUT1Q9H6E5 874 aaKnown RBP8.84□□□□□ -0.99
LSM5-206ENST00000409987 FOXD4L5Q5VV16 416 aaPredicted RBP8.83□□□□□ -1
LSM5-206ENST00000409987 ZNF295-AS1Q8N0V1 137 aa8.83□□□□□ -1
LSM5-206ENST00000409987 FOXD4L4Q8WXT5 416 aaPredicted RBP8.83□□□□□ -1
LSM5-206ENST00000409987 BIN2Q9UBW5 565 aaPredicted RBP8.83□□□□□ -1
LSM5-206ENST00000409987 PSMA6P60900 246 aaKnown RBP8.82□□□□□ -1
LSM5-206ENST00000409987 ECM1Q16610 540 aa8.82□□□□□ -1
LSM5-206ENST00000409987 POTEAQ6S8J7 498 aa8.82□□□□□ -1
LSM5-206ENST00000409987 VTI1AQ96AJ9 217 aa8.82□□□□□ -1
LSM5-206ENST00000409987 NLRP3Q96P20 1036 aa8.82□□□□□ -1
LSM5-206ENST00000409987 RGS20O76081 388 aa8.81□□□□□ -1
LSM5-206ENST00000409987 NPM2Q86SE8 214 aaKnown RBP8.81□□□□□ -1
LSM5-206ENST00000409987 GLYCTKQ8IVS8 523 aa8.81□□□□□ -1
LSM5-206ENST00000409987 HELQQ8TDG4 1101 aa8.81□□□□□ -1
LSM5-206ENST00000409987 ZDHHC1Q8WTX9 485 aa8.81□□□□□ -1
LSM5-206ENST00000409987 SAP130Q9H0E3 1048 aa8.81□□□□□ -1
LSM5-206ENST00000409987 EML1O00423 815 aa8.8□□□□□ -1
LSM5-206ENST00000409987 FKBP4Q02790 459 aaKnown RBP eCLIP8.8□□□□□ -1
LSM5-206ENST00000409987 SF3B2Q13435 895 aaKnown RBP8.8□□□□□ -1
LSM5-206ENST00000409987 SH3PXD2AQ5TCZ1 1133 aa8.8□□□□□ -1
LSM5-206ENST00000409987 PPARGC1BQ86YN6 1023 aaKnown RBP8.8□□□□□ -1
LSM5-206ENST00000409987 NBPF15Q8N660 670 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms