RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 PLEKHG3A1L390 1219 aa10.56□□□□□ -0.72
UBE2F-204ENST00000409953 TMEM88BA6NKF7 163 aa10.56□□□□□ -0.72
UBE2F-204ENST00000409953 POTECB2RU33 542 aa10.56□□□□□ -0.72
UBE2F-204ENST00000409953 AK7Q96M32 723 aa10.56□□□□□ -0.72
UBE2F-204ENST00000409953 BEGAINQ9BUH8 593 aa10.56□□□□□ -0.72
UBE2F-204ENST00000409953 TSKSQ9UJT2 592 aa10.56□□□□□ -0.72
UBE2F-204ENST00000409953 CUL9Q8IWT3 2517 aa10.56□□□□□ -0.72
UBE2F-204ENST00000409953 PASKQ96RG2 1323 aa10.56□□□□□ -0.72
UBE2F-204ENST00000409953 RASSF7Q02833 373 aa10.55□□□□□ -0.72
UBE2F-204ENST00000409953 DGKZQ13574 1117 aa10.55□□□□□ -0.72
UBE2F-204ENST00000409953 NLRP2Q9NX02 1062 aa10.55□□□□□ -0.72
UBE2F-204ENST00000409953 NSD3Q9BZ95 1437 aa10.55□□□□□ -0.72
UBE2F-204ENST00000409953 WDR33Q9C0J8 1336 aaKnown RBP10.55□□□□□ -0.72
UBE2F-204ENST00000409953 ADGRB1O14514 1584 aa10.54□□□□□ -0.72
UBE2F-204ENST00000409953 SOX12O15370 315 aa10.54□□□□□ -0.72
UBE2F-204ENST00000409953 KDM6AO15550 1401 aaPredicted RBP10.54□□□□□ -0.72
UBE2F-204ENST00000409953 C4BP0C0L5 1744 aa10.54□□□□□ -0.72
UBE2F-204ENST00000409953 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
UBE2F-204ENST00000409953 POTEJP0CG39 1038 aa10.54□□□□□ -0.72
UBE2F-204ENST00000409953 CCDC61Q9Y6R9 512 aa10.54□□□□□ -0.72
UBE2F-204ENST00000409953 TAF1LQ8IZX4 1826 aa10.54□□□□□ -0.72
UBE2F-204ENST00000409953 RASSF10A6NK89 507 aa10.53□□□□□ -0.72
UBE2F-204ENST00000409953 KCNA3P22001 575 aa10.53□□□□□ -0.72
UBE2F-204ENST00000409953 ITGAEP38570 1179 aa10.53□□□□□ -0.72
UBE2F-204ENST00000409953 DEFB115Q30KQ5 88 aa10.53□□□□□ -0.72
UBE2F-204ENST00000409953 DALRD3Q5D0E6 543 aaKnown RBP10.53□□□□□ -0.72
UBE2F-204ENST00000409953 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
UBE2F-204ENST00000409953 PIM2Q9P1W9 311 aa10.53□□□□□ -0.72
UBE2F-204ENST00000409953 UBR3Q6ZT12 1888 aa10.53□□□□□ -0.72
UBE2F-204ENST00000409953 TIAM2Q8IVF5 1701 aa10.53□□□□□ -0.72
UBE2F-204ENST00000409953 HMGB2P26583 209 aaKnown RBP10.52□□□□□ -0.73
UBE2F-204ENST00000409953 CDK19Q9BWU1 502 aa10.52□□□□□ -0.73
UBE2F-204ENST00000409953 LTBP1Q14766 1721 aa10.52□□□□□ -0.73
UBE2F-204ENST00000409953 THSD7BQ9C0I4 1608 aa10.51□□□□□ -0.73
UBE2F-204ENST00000409953 LMNB1P20700 586 aa10.51□□□□□ -0.73
UBE2F-204ENST00000409953 SSFA2P28290 1259 aa10.51□□□□□ -0.73
UBE2F-204ENST00000409953 FXR1P51114 621 aaKnown RBP eCLIP10.51□□□□□ -0.73
UBE2F-204ENST00000409953 CCDC87Q9NVE4 849 aa10.51□□□□□ -0.73
UBE2F-204ENST00000409953 NBPF15Q8N660 670 aa10.5□□□□□ -0.73
UBE2F-204ENST00000409953 SLC17A8Q8NDX2 589 aa10.5□□□□□ -0.73
UBE2F-204ENST00000409953 PITPNM2Q9BZ72 1349 aa10.5□□□□□ -0.73
UBE2F-204ENST00000409953 PALLDQ8WX93 1383 aa10.5□□□□□ -0.73
UBE2F-204ENST00000409953 KCNH5Q8NCM2 988 aa10.49□□□□□ -0.73
UBE2F-204ENST00000409953 CASP8AP2Q9UKL3 1982 aa10.48□□□□□ -0.73
UBE2F-204ENST00000409953 DPY19L2Q6NUT2 758 aa10.48□□□□□ -0.73
UBE2F-204ENST00000409953 ABT1Q9ULW3 272 aaKnown RBP10.48□□□□□ -0.73
UBE2F-204ENST00000409953 LDHDQ86WU2 507 aa10.47□□□□□ -0.73
UBE2F-204ENST00000409953 NFAT5O94916 1531 aa10.47□□□□□ -0.73
UBE2F-204ENST00000409953 C4AP0C0L4 1744 aa10.47□□□□□ -0.73
UBE2F-204ENST00000409953 ITGBL1O95965 494 aaPredicted RBP10.46□□□□□ -0.73
UBE2F-204ENST00000409953 GRM1Q13255 1194 aa10.46□□□□□ -0.73
UBE2F-204ENST00000409953 PAXIP1Q6ZW49 1069 aaPredicted RBP10.46□□□□□ -0.73
UBE2F-204ENST00000409953 ADAMTS7Q9UKP4 1686 aa10.46□□□□□ -0.74
UBE2F-204ENST00000409953 CAPNS2Q96L46 248 aa10.45□□□□□ -0.74
UBE2F-204ENST00000409953 GNPATO15228 680 aa10.44□□□□□ -0.74
UBE2F-204ENST00000409953 CHRNA5P30532 468 aa10.44□□□□□ -0.74
UBE2F-204ENST00000409953 VASPP50552 380 aaPredicted RBP10.44□□□□□ -0.74
UBE2F-204ENST00000409953 ANKRD24Q8TF21 1146 aa10.44□□□□□ -0.74
UBE2F-204ENST00000409953 GPR101Q96P66 508 aaPredicted RBP10.44□□□□□ -0.74
UBE2F-204ENST00000409953 CA12O43570 354 aa10.43□□□□□ -0.74
UBE2F-204ENST00000409953 ECE1P42892 770 aa10.43□□□□□ -0.74
UBE2F-204ENST00000409953 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
UBE2F-204ENST00000409953 NLGN1Q8N2Q7 840 aa10.43□□□□□ -0.74
UBE2F-204ENST00000409953 PARP3Q9Y6F1 533 aa10.43□□□□□ -0.74
UBE2F-204ENST00000409953 TMF1P82094 1093 aa10.42□□□□□ -0.74
UBE2F-204ENST00000409953 CYP4F22Q6NT55 531 aa10.42□□□□□ -0.74
UBE2F-204ENST00000409953 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
UBE2F-204ENST00000409953 LINC00116Q8NCU8 138 aa10.41□□□□□ -0.74
UBE2F-204ENST00000409953 CCDC88AQ3V6T2 1871 aa10.4□□□□□ -0.74
UBE2F-204ENST00000409953 DDNO94850 711 aaPredicted RBP10.4□□□□□ -0.74
UBE2F-204ENST00000409953 SPDYE1Q8NFV5 336 aaPredicted RBP10.4□□□□□ -0.74
UBE2F-204ENST00000409953 ZCRB1Q8TBF4 217 aaKnown RBP10.4□□□□□ -0.74
UBE2F-204ENST00000409953 IQCA1LA6NCM1 817 aa10.39□□□□□ -0.75
UBE2F-204ENST00000409953 NFKBIEO00221 500 aa10.39□□□□□ -0.75
UBE2F-204ENST00000409953 AOC2O75106 756 aa10.39□□□□□ -0.75
UBE2F-204ENST00000409953 SRPK2P78362 688 aaKnown RBP10.39□□□□□ -0.75
UBE2F-204ENST00000409953 ERFEQ4G0M1 354 aa10.39□□□□□ -0.75
UBE2F-204ENST00000409953 EAPPQ56P03 285 aaPredicted RBP10.39□□□□□ -0.75
UBE2F-204ENST00000409953 TAF1DQ9H5J8 278 aaPredicted RBP10.39□□□□□ -0.75
UBE2F-204ENST00000409953 MAP2K2P36507 400 aa10.38□□□□□ -0.75
UBE2F-204ENST00000409953 MPRIPQ6WCQ1 1025 aa10.38□□□□□ -0.75
UBE2F-204ENST00000409953 SMARCC1Q92922 1105 aaPredicted RBP10.38□□□□□ -0.75
UBE2F-204ENST00000409953 CLEC11AQ9Y240 323 aa10.38□□□□□ -0.75
UBE2F-204ENST00000409953 SZT2Q5T011 3432 aa10.38□□□□□ -0.75
UBE2F-204ENST00000409953 GYS1P13807 737 aa10.37□□□□□ -0.75
UBE2F-204ENST00000409953 NBPF1Q3BBV0 1214 aa10.37□□□□□ -0.75
UBE2F-204ENST00000409953 CNTROBQ8N137 903 aa10.37□□□□□ -0.75
UBE2F-204ENST00000409953 CABP1Q9NZU7 370 aa10.37□□□□□ -0.75
UBE2F-204ENST00000409953 TTC21BQ7Z4L5 1316 aa10.36□□□□□ -0.75
UBE2F-204ENST00000409953 MAP1SQ66K74 1059 aaPredicted RBP10.36□□□□□ -0.75
UBE2F-204ENST00000409953 CABP2Q9NPB3 220 aa10.36□□□□□ -0.75
UBE2F-204ENST00000409953 MEGF6O75095 1541 aa10.36□□□□□ -0.75
UBE2F-204ENST00000409953 LTN1O94822 1766 aa10.35□□□□□ -0.75
UBE2F-204ENST00000409953 ADAMTSL1Q8N6G6 1762 aa10.35□□□□□ -0.75
UBE2F-204ENST00000409953 LOC102724428A0A0B4J2F2 783 aa10.35□□□□□ -0.75
UBE2F-204ENST00000409953 BRPF1P55201 1214 aaPredicted RBP10.35□□□□□ -0.75
UBE2F-204ENST00000409953 SIK1P57059 783 aa10.35□□□□□ -0.75
UBE2F-204ENST00000409953 TRAPPC3LQ5T215 181 aa10.35□□□□□ -0.75
UBE2F-204ENST00000409953 DDX21Q9NR30 783 aaKnown RBP eCLIP10.35□□□□□ -0.75
UBE2F-204ENST00000409953 MNX1P50219 401 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms