RNA–Protein interactions for RNA: ENST00000409551.7

PAX3-207, Transcript of paired box 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-207ENST00000409551 LARP1Q6PKG0 1096 aaKnown RBP21.28■■□□□ 1
PAX3-207ENST00000409551 FAM98CQ17RN3 349 aaKnown RBP21.28■■□□□ 1
PAX3-207ENST00000409551 GLI3P10071 1580 aa21.27■■□□□ 1
PAX3-207ENST00000409551 PLEKHG2Q9H7P9 1386 aa21.27■■□□□ 1
PAX3-207ENST00000409551 IL17REQ8NFR9 667 aa21.26■□□□□ 0.99
PAX3-207ENST00000409551 TSPYL4Q9UJ04 414 aa21.26■□□□□ 0.99
PAX3-207ENST00000409551 SPATA31A5Q5VU36 1347 aa21.26■□□□□ 0.99
PAX3-207ENST00000409551 SPATA31A7Q8IWB4 1347 aa21.26■□□□□ 0.99
PAX3-207ENST00000409551 CEMIPQ8WUJ3 1361 aa21.26■□□□□ 0.99
PAX3-207ENST00000409551 ELL2O00472 640 aaPredicted RBP21.25■□□□□ 0.99
PAX3-207ENST00000409551 EP400Q96L91 3159 aa21.25■□□□□ 0.99
PAX3-207ENST00000409551 CSB-PGBD3P0DP91 1061 aa21.25■□□□□ 0.99
PAX3-207ENST00000409551 AKAP4Q5JQC9 854 aa21.25■□□□□ 0.99
PAX3-207ENST00000409551 DDX19BQ9UMR2 479 aa21.25■□□□□ 0.99
PAX3-207ENST00000409551 VIRMAQ69YN4 1812 aaKnown RBP21.24■□□□□ 0.99
PAX3-207ENST00000409551 OVOS2A0A0G2JMS6 1433 aa21.24■□□□□ 0.99
PAX3-207ENST00000409551 COL5A2P05997 1499 aaPredicted RBP21.24■□□□□ 0.99
PAX3-207ENST00000409551 SOS1Q07889 1333 aaPredicted RBP21.23■□□□□ 0.99
PAX3-207ENST00000409551 SPATA31A1Q5TZJ5 1347 aa21.23■□□□□ 0.99
PAX3-207ENST00000409551 TOM1L2Q6ZVM7 507 aa21.23■□□□□ 0.99
PAX3-207ENST00000409551 SEPT12Q8IYM1 358 aa21.23■□□□□ 0.99
PAX3-207ENST00000409551 TAF7Q15545 349 aaPredicted RBP21.23■□□□□ 0.99
PAX3-207ENST00000409551 TCERG1O14776 1098 aaKnown RBP21.22■□□□□ 0.99
PAX3-207ENST00000409551 ZNF530Q6P9A1 599 aaPredicted RBP21.22■□□□□ 0.99
PAX3-207ENST00000409551 ADAMTS7Q9UKP4 1686 aa21.21■□□□□ 0.99
PAX3-207ENST00000409551 API5Q9BZZ5 524 aaKnown RBP21.21■□□□□ 0.99
PAX3-207ENST00000409551 KDM3BQ7LBC6 1761 aa21.21■□□□□ 0.99
PAX3-207ENST00000409551 TMEM57Q8N5G2 664 aa21.2■□□□□ 0.99
PAX3-207ENST00000409551 KRT24Q2M2I5 525 aa21.2■□□□□ 0.98
PAX3-207ENST00000409551 MIS18AQ9NYP9 233 aa21.2■□□□□ 0.98
PAX3-207ENST00000409551 ABCC4O15439 1325 aa21.19■□□□□ 0.98
PAX3-207ENST00000409551 C1orf141Q5JVX7 400 aa21.19■□□□□ 0.98
PAX3-207ENST00000409551 ITPRIPQ8IWB1 547 aa21.19■□□□□ 0.98
PAX3-207ENST00000409551 WDR17Q8IZU2 1322 aa21.19■□□□□ 0.98
PAX3-207ENST00000409551 CHMP4BQ9H444 224 aaKnown RBP21.18■□□□□ 0.98
PAX3-207ENST00000409551 NLRP2Q9NX02 1062 aa21.18■□□□□ 0.98
PAX3-207ENST00000409551 CACNA1FO60840 1977 aa21.18■□□□□ 0.98
PAX3-207ENST00000409551 ONECUT3O60422 494 aaPredicted RBP21.18■□□□□ 0.98
PAX3-207ENST00000409551 RAPGEF4Q8WZA2 1011 aa21.18■□□□□ 0.98
PAX3-207ENST00000409551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.17■□□□□ 0.98
PAX3-207ENST00000409551 PKD1L3Q7Z443 1732 aa21.16■□□□□ 0.98
PAX3-207ENST00000409551 IGHDP01880 384 aa21.16■□□□□ 0.98
PAX3-207ENST00000409551 TATP17735 454 aaPredicted RBP21.16■□□□□ 0.98
PAX3-207ENST00000409551 PCDHB15Q9Y5E8 787 aa21.16■□□□□ 0.98
PAX3-207ENST00000409551 SIPA1L3O60292 1781 aaPredicted RBP21.16■□□□□ 0.98
PAX3-207ENST00000409551 LGR6Q9HBX8 967 aa21.15■□□□□ 0.98
PAX3-207ENST00000409551 RBM19Q9Y4C8 960 aaKnown RBP21.15■□□□□ 0.98
PAX3-207ENST00000409551 PTPRCP08575 1304 aa21.15■□□□□ 0.98
PAX3-207ENST00000409551 RNMTO43148 476 aaKnown RBP21.15■□□□□ 0.98
PAX3-207ENST00000409551 BRWD3Q6RI45 1802 aa21.14■□□□□ 0.98
PAX3-207ENST00000409551 RWDD1Q9H446 243 aaPredicted RBP21.14■□□□□ 0.97
PAX3-207ENST00000409551 MEGF6O75095 1541 aa21.14■□□□□ 0.97
PAX3-207ENST00000409551 SCN11AQ9UI33 1791 aa21.13■□□□□ 0.97
PAX3-207ENST00000409551 TEFQ10587 303 aa21.13■□□□□ 0.97
PAX3-207ENST00000409551 KRT27Q7Z3Y8 459 aa21.13■□□□□ 0.97
PAX3-207ENST00000409551 ZBTB40Q9NUA8 1239 aa21.13■□□□□ 0.97
PAX3-207ENST00000409551 FAM182BQ5T319 152 aa21.13■□□□□ 0.97
PAX3-207ENST00000409551 BARGINQ6ZT62 677 aa21.13■□□□□ 0.97
PAX3-207ENST00000409551 PARP4Q9UKK3 1724 aaKnown RBP21.13■□□□□ 0.97
PAX3-207ENST00000409551 SPG7Q9UQ90 795 aa21.13■□□□□ 0.97
PAX3-207ENST00000409551 THRAP3Q9Y2W1 955 aaKnown RBP21.13■□□□□ 0.97
PAX3-207ENST00000409551 MPRIPQ6WCQ1 1025 aa21.11■□□□□ 0.97
PAX3-207ENST00000409551 CARD10Q9BWT7 1032 aa21.11■□□□□ 0.97
PAX3-207ENST00000409551 HOXB7P09629 217 aa21.1■□□□□ 0.97
PAX3-207ENST00000409551 CCDC30Q5VVM6 783 aa21.1■□□□□ 0.97
PAX3-207ENST00000409551 ZBTB7BO15156 539 aaPredicted RBP21.1■□□□□ 0.97
PAX3-207ENST00000409551 SLC4A2P04920 1241 aa21.1■□□□□ 0.97
PAX3-207ENST00000409551 HDAC1Q13547 482 aaPredicted RBP21.1■□□□□ 0.97
PAX3-207ENST00000409551 UPF1Q92900 1129 aaKnown RBP eCLIP21.1■□□□□ 0.97
PAX3-207ENST00000409551 CHMP4AQ9BY43 222 aa21.1■□□□□ 0.97
PAX3-207ENST00000409551 INTS3Q68E01 1043 aaKnown RBP21.09■□□□□ 0.97
PAX3-207ENST00000409551 STK31Q9BXU1 1019 aa21.09■□□□□ 0.97
PAX3-207ENST00000409551 EIF4A1P60842 406 aaKnown RBP21.08■□□□□ 0.97
PAX3-207ENST00000409551 BTBD11A6QL63 1104 aa21.08■□□□□ 0.96
PAX3-207ENST00000409551 PHKG2P15735 406 aa21.07■□□□□ 0.96
PAX3-207ENST00000409551 IFNL2Q8IZJ0 200 aa21.07■□□□□ 0.96
PAX3-207ENST00000409551 THSD7AQ9UPZ6 1657 aa21.07■□□□□ 0.96
PAX3-207ENST00000409551 MRC1P22897 1456 aa21.05■□□□□ 0.96
PAX3-207ENST00000409551 KDM6AO15550 1401 aaPredicted RBP21.05■□□□□ 0.96
PAX3-207ENST00000409551 DDB1Q16531 1140 aa21.05■□□□□ 0.96
PAX3-207ENST00000409551 N4BP2Q86UW6 1770 aaPredicted RBP21.05■□□□□ 0.96
PAX3-207ENST00000409551 HSP90AB1P08238 724 aaKnown RBP21.03■□□□□ 0.96
PAX3-207ENST00000409551 SKAP1Q86WV1 359 aa21.03■□□□□ 0.96
PAX3-207ENST00000409551 HEG1Q9ULI3 1381 aa21.03■□□□□ 0.96
PAX3-207ENST00000409551 HDGFL1Q5TGJ6 251 aa21.02■□□□□ 0.96
PAX3-207ENST00000409551 G2E3Q7L622 706 aa21.02■□□□□ 0.96
PAX3-207ENST00000409551 IL2RBP14784 551 aa21.02■□□□□ 0.96
PAX3-207ENST00000409551 DCAF5Q96JK2 942 aa21.02■□□□□ 0.96
PAX3-207ENST00000409551 CDCA7Q9BWT1 371 aaPredicted RBP21.02■□□□□ 0.96
PAX3-207ENST00000409551 EXOC5O00471 708 aa21.01■□□□□ 0.95
PAX3-207ENST00000409551 SLC52A2Q9HAB3 445 aa21.01■□□□□ 0.95
PAX3-207ENST00000409551 KCNQ3O43525 872 aa21■□□□□ 0.95
PAX3-207ENST00000409551 FLIIQ13045 1269 aa21■□□□□ 0.95
PAX3-207ENST00000409551 PXDNLA1KZ92 1463 aa21■□□□□ 0.95
PAX3-207ENST00000409551 CYP27B1O15528 508 aa21■□□□□ 0.95
PAX3-207ENST00000409551 PDE4AP27815 886 aa21■□□□□ 0.95
PAX3-207ENST00000409551 CCT4P50991 539 aaKnown RBP21■□□□□ 0.95
PAX3-207ENST00000409551 SMC5Q8IY18 1101 aa21■□□□□ 0.95
PAX3-207ENST00000409551 PDZRN3Q9UPQ7 1066 aa20.99■□□□□ 0.95
PAX3-207ENST00000409551 RGS3P49796 1198 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms