RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 CADPS2Q86UW7 1296 aa21.5■■□□□ 1.03
LRRTM1-202ENST00000409148 MEIS3Q99687 375 aa21.5■■□□□ 1.03
LRRTM1-202ENST00000409148 SLC4A10Q6U841 1118 aa21.5■■□□□ 1.03
LRRTM1-202ENST00000409148 CHMP4AQ9BY43 222 aa21.5■■□□□ 1.03
LRRTM1-202ENST00000409148 OVOS2A0A0G2JMS6 1433 aa21.5■■□□□ 1.03
LRRTM1-202ENST00000409148 TEFQ10587 303 aa21.49■■□□□ 1.03
LRRTM1-202ENST00000409148 FKBP5Q13451 457 aaPredicted RBP21.49■■□□□ 1.03
LRRTM1-202ENST00000409148 C1orf141Q5JVX7 400 aa21.49■■□□□ 1.03
LRRTM1-202ENST00000409148 N4BP2Q86UW6 1770 aaPredicted RBP21.48■■□□□ 1.03
LRRTM1-202ENST00000409148 F6X3S4 739 aa21.48■■□□□ 1.03
LRRTM1-202ENST00000409148 IL27Q8NEV9 243 aa21.48■■□□□ 1.03
LRRTM1-202ENST00000409148 NPHP3Q7Z494 1330 aa21.48■■□□□ 1.03
LRRTM1-202ENST00000409148 RGPD5Q99666 1765 aa21.48■■□□□ 1.03
LRRTM1-202ENST00000409148 HOXB7P09629 217 aa21.47■■□□□ 1.03
LRRTM1-202ENST00000409148 LGR6Q9HBX8 967 aa21.47■■□□□ 1.03
LRRTM1-202ENST00000409148 PXDNLA1KZ92 1463 aa21.47■■□□□ 1.03
LRRTM1-202ENST00000409148 HDGFL1Q5TGJ6 251 aa21.47■■□□□ 1.03
LRRTM1-202ENST00000409148 HMMRO75330 724 aa21.46■■□□□ 1.03
LRRTM1-202ENST00000409148 MFAP1P55081 439 aaKnown RBP21.46■■□□□ 1.03
LRRTM1-202ENST00000409148 NECTIN2Q92692 538 aa21.46■■□□□ 1.03
LRRTM1-202ENST00000409148 AXIN2Q9Y2T1 843 aa21.46■■□□□ 1.03
LRRTM1-202ENST00000409148 ERBB3P21860 1342 aa21.46■■□□□ 1.03
LRRTM1-202ENST00000409148 PXDNQ92626 1479 aa21.45■■□□□ 1.02
LRRTM1-202ENST00000409148 EIF4A1P60842 406 aaKnown RBP21.45■■□□□ 1.02
LRRTM1-202ENST00000409148 ZC3H6P61129 1189 aaKnown RBP21.44■■□□□ 1.02
LRRTM1-202ENST00000409148 C22orf23Q9BZE7 217 aa21.44■■□□□ 1.02
LRRTM1-202ENST00000409148 TNS3Q68CZ2 1445 aa21.44■■□□□ 1.02
LRRTM1-202ENST00000409148 RNMTO43148 476 aaKnown RBP21.44■■□□□ 1.02
LRRTM1-202ENST00000409148 GNAI3P08754 354 aa21.44■■□□□ 1.02
LRRTM1-202ENST00000409148 BTBD11A6QL63 1104 aa21.43■■□□□ 1.02
LRRTM1-202ENST00000409148 GNAI2P04899 355 aa21.43■■□□□ 1.02
LRRTM1-202ENST00000409148 MPRIPQ6WCQ1 1025 aa21.43■■□□□ 1.02
LRRTM1-202ENST00000409148 USP35Q9P2H5 1018 aa21.43■■□□□ 1.02
LRRTM1-202ENST00000409148 ABCC6O95255 1503 aa21.42■■□□□ 1.02
LRRTM1-202ENST00000409148 DDX17Q92841 729 aaKnown RBP21.4■■□□□ 1.02
LRRTM1-202ENST00000409148 ADAMTS7Q9UKP4 1686 aa21.4■■□□□ 1.02
LRRTM1-202ENST00000409148 PLEKHM2Q8IWE5 1019 aa21.4■■□□□ 1.02
LRRTM1-202ENST00000409148 XIRP1Q702N8 1843 aaKnown RBP21.39■■□□□ 1.02
LRRTM1-202ENST00000409148 COL18A1P39060 1754 aa21.39■■□□□ 1.02
LRRTM1-202ENST00000409148 SIPA1L3O60292 1781 aaPredicted RBP21.39■■□□□ 1.01
LRRTM1-202ENST00000409148 CRYBG1Q9Y4K1 1723 aa21.38■■□□□ 1.01
LRRTM1-202ENST00000409148 EIF2S2P20042 333 aaKnown RBP21.38■■□□□ 1.01
LRRTM1-202ENST00000409148 RAPGEF4Q8WZA2 1011 aa21.38■■□□□ 1.01
LRRTM1-202ENST00000409148 EIF5BO60841 1220 aaKnown RBP21.38■■□□□ 1.01
LRRTM1-202ENST00000409148 PLEKHG2Q9H7P9 1386 aa21.37■■□□□ 1.01
LRRTM1-202ENST00000409148 SPATA31A3Q5VYP0 1347 aa21.37■■□□□ 1.01
LRRTM1-202ENST00000409148 PHAXQ9H814 394 aaKnown RBP21.37■■□□□ 1.01
LRRTM1-202ENST00000409148 NLRP2Q9NX02 1062 aa21.37■■□□□ 1.01
LRRTM1-202ENST00000409148 KCNQ3O43525 872 aa21.36■■□□□ 1.01
LRRTM1-202ENST00000409148 CDC45O75419 566 aa21.36■■□□□ 1.01
LRRTM1-202ENST00000409148 TTC22Q5TAA0 569 aa21.35■■□□□ 1.01
LRRTM1-202ENST00000409148 CHPF2Q9P2E5 772 aa21.35■■□□□ 1.01
LRRTM1-202ENST00000409148 TATP17735 454 aaPredicted RBP21.35■■□□□ 1.01
LRRTM1-202ENST00000409148 RBM25P49756 843 aaKnown RBP21.35■■□□□ 1.01
LRRTM1-202ENST00000409148 TBC1D9Q6ZT07 1266 aa21.34■■□□□ 1.01
LRRTM1-202ENST00000409148 GSPT1P15170 499 aaKnown RBP21.34■■□□□ 1.01
LRRTM1-202ENST00000409148 TBC1D2Q9BYX2 928 aa21.34■■□□□ 1.01
LRRTM1-202ENST00000409148 CPDO75976 1380 aa21.33■■□□□ 1.01
LRRTM1-202ENST00000409148 UBTFL1P0CB47 393 aaPredicted RBP21.33■■□□□ 1.01
LRRTM1-202ENST00000409148 CSB-PGBD3P0DP91 1061 aa21.33■■□□□ 1.01
LRRTM1-202ENST00000409148 ATP8B2P98198 1209 aa21.33■■□□□ 1.01
LRRTM1-202ENST00000409148 SRCIN1Q9C0H9 1055 aa21.33■■□□□ 1.01
LRRTM1-202ENST00000409148 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.33■■□□□ 1.01
LRRTM1-202ENST00000409148 DBF4Q9UBU7 674 aaPredicted RBP21.33■■□□□ 1.01
LRRTM1-202ENST00000409148 SPG7Q9UQ90 795 aa21.33■■□□□ 1.01
LRRTM1-202ENST00000409148 HEG1Q9ULI3 1381 aa21.33■■□□□ 1
LRRTM1-202ENST00000409148 SCN11AQ9UI33 1791 aa21.33■■□□□ 1
LRRTM1-202ENST00000409148 APBB1O00213 710 aa21.32■■□□□ 1
LRRTM1-202ENST00000409148 C16orf71Q8IYS4 520 aaPredicted RBP21.32■■□□□ 1
LRRTM1-202ENST00000409148 CABLES1Q8TDN4 633 aa21.32■■□□□ 1
LRRTM1-202ENST00000409148 USP44Q9H0E7 712 aa21.32■■□□□ 1
LRRTM1-202ENST00000409148 SMARCA5O60264 1052 aaPredicted RBP21.31■■□□□ 1
LRRTM1-202ENST00000409148 GIGYF1O75420 1035 aaPredicted RBP21.31■■□□□ 1
LRRTM1-202ENST00000409148 BRINP3Q76B58 766 aa21.31■■□□□ 1
LRRTM1-202ENST00000409148 DNAAF4Q8WXU2 420 aa21.31■■□□□ 1
LRRTM1-202ENST00000409148 LRRFIP2Q9Y608 721 aaKnown RBP21.31■■□□□ 1
LRRTM1-202ENST00000409148 NFKBIBQ15653 356 aa21.3■■□□□ 1
LRRTM1-202ENST00000409148 RTN4Q9NQC3 1192 aaKnown RBP21.3■■□□□ 1
LRRTM1-202ENST00000409148 MEGF6O75095 1541 aa21.3■■□□□ 1
LRRTM1-202ENST00000409148 OTUD7AQ8TE49 926 aaPredicted RBP21.29■■□□□ 1
LRRTM1-202ENST00000409148 PHKG2P15735 406 aa21.28■■□□□ 1
LRRTM1-202ENST00000409148 CHRNA2Q15822 529 aa21.28■■□□□ 1
LRRTM1-202ENST00000409148 PKD1L3Q7Z443 1732 aa21.28■■□□□ 1
LRRTM1-202ENST00000409148 PNMA6EA0A0J9YXQ4 647 aa21.28■■□□□ 1
LRRTM1-202ENST00000409148 PI4KAP2A4QPH2 592 aa21.28■■□□□ 1
LRRTM1-202ENST00000409148 IFNL2Q8IZJ0 200 aa21.28■■□□□ 1
LRRTM1-202ENST00000409148 PI4KAP1Q8N8J0 262 aa21.28■■□□□ 1
LRRTM1-202ENST00000409148 LRRCC1Q9C099 1032 aa21.28■■□□□ 1
LRRTM1-202ENST00000409148 EXOC6BQ9Y2D4 811 aa21.28■■□□□ 1
LRRTM1-202ENST00000409148 BEND3Q5T5X7 828 aa21.27■■□□□ 1
LRRTM1-202ENST00000409148 OSBPL3Q9H4L5 887 aa21.27■■□□□ 1
LRRTM1-202ENST00000409148 SLC52A2Q9HAB3 445 aa21.27■■□□□ 1
LRRTM1-202ENST00000409148 KDM6AO15550 1401 aaPredicted RBP21.27■■□□□ 1
LRRTM1-202ENST00000409148 IBTKQ9P2D0 1353 aaPredicted RBP21.26■□□□□ 0.99
LRRTM1-202ENST00000409148 ZNF335Q9H4Z2 1342 aaPredicted RBP21.26■□□□□ 0.99
LRRTM1-202ENST00000409148 CASC1Q6TDU7 716 aa21.26■□□□□ 0.99
LRRTM1-202ENST00000409148 HSCBQ8IWL3 235 aa21.26■□□□□ 0.99
LRRTM1-202ENST00000409148 ADCY9O60503 1353 aa21.25■□□□□ 0.99
LRRTM1-202ENST00000409148 HYPKQ9NX55 129 aa21.25■□□□□ 0.99
LRRTM1-202ENST00000409148 SLKQ9H2G2 1235 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms