RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 ANKRD44Q8N8A2 993 aa15.4■□□□□ 0.06
ATG9A-203ENST00000409033 ABCC4O15439 1325 aa15.4■□□□□ 0.06
ATG9A-203ENST00000409033 PTPRCP08575 1304 aa15.4■□□□□ 0.06
ATG9A-203ENST00000409033 PIK3R4Q99570 1358 aa15.4■□□□□ 0.06
ATG9A-203ENST00000409033 INTS3Q68E01 1043 aaKnown RBP15.4■□□□□ 0.06
ATG9A-203ENST00000409033 CWF19L2Q2TBE0 894 aaKnown RBP15.39■□□□□ 0.05
ATG9A-203ENST00000409033 PNMA6EA0A0J9YXQ4 647 aa15.39■□□□□ 0.05
ATG9A-203ENST00000409033 GSE1Q14687 1217 aa15.39■□□□□ 0.05
ATG9A-203ENST00000409033 AXIN2Q9Y2T1 843 aa15.39■□□□□ 0.05
ATG9A-203ENST00000409033 NFATC2IPQ8NCF5 419 aa15.39■□□□□ 0.05
ATG9A-203ENST00000409033 CCDC85AQ96PX6 553 aaPredicted RBP15.38■□□□□ 0.05
ATG9A-203ENST00000409033 PPP1R42Q7Z4L9 355 aa15.38■□□□□ 0.05
ATG9A-203ENST00000409033 MAP3K2Q9Y2U5 619 aa15.38■□□□□ 0.05
ATG9A-203ENST00000409033 NEXNQ0ZGT2 675 aa15.38■□□□□ 0.05
ATG9A-203ENST00000409033 BMP2KLQ5H9B9 411 aa15.38■□□□□ 0.05
ATG9A-203ENST00000409033 DNAAF4Q8WXU2 420 aa15.38■□□□□ 0.05
ATG9A-203ENST00000409033 ARHGEF10O15013 1369 aa15.37■□□□□ 0.05
ATG9A-203ENST00000409033 SDSP20132 328 aa15.37■□□□□ 0.05
ATG9A-203ENST00000409033 CABP4P57796 275 aa15.37■□□□□ 0.05
ATG9A-203ENST00000409033 PLEKHM2Q8IWE5 1019 aa15.37■□□□□ 0.05
ATG9A-203ENST00000409033 OVOS2A0A0J9YW53 1432 aa15.37■□□□□ 0.05
ATG9A-203ENST00000409033 OVOS2Q6IE36 1432 aa15.37■□□□□ 0.05
ATG9A-203ENST00000409033 KIF20BQ96Q89 1820 aa15.36■□□□□ 0.05
ATG9A-203ENST00000409033 ATP5J2-PTCD1G3V325 749 aa15.36■□□□□ 0.05
ATG9A-203ENST00000409033 TECPR2O15040 1411 aa15.36■□□□□ 0.05
ATG9A-203ENST00000409033 KIAA1211Q6ZU35 1233 aa15.36■□□□□ 0.05
ATG9A-203ENST00000409033 DCTPP1Q9H773 170 aa15.36■□□□□ 0.05
ATG9A-203ENST00000409033 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
ATG9A-203ENST00000409033 PA2G4Q9UQ80 394 aaKnown RBP15.36■□□□□ 0.05
ATG9A-203ENST00000409033 NBPF7P0C2Y1 421 aaPredicted RBP15.35■□□□□ 0.05
ATG9A-203ENST00000409033 IFIT2P09913 472 aaKnown RBP15.35■□□□□ 0.05
ATG9A-203ENST00000409033 LARP6Q9BRS8 491 aaKnown RBP15.35■□□□□ 0.05
ATG9A-203ENST00000409033 NPHP4O75161 1426 aaPredicted RBP15.35■□□□□ 0.05
ATG9A-203ENST00000409033 DDX58O95786 925 aaKnown RBP15.35■□□□□ 0.05
ATG9A-203ENST00000409033 MCCP23508 829 aa15.35■□□□□ 0.05
ATG9A-203ENST00000409033 UPF3BQ9BZI7 483 aaKnown RBP15.35■□□□□ 0.05
ATG9A-203ENST00000409033 TMEM94Q12767 1356 aa15.35■□□□□ 0.05
ATG9A-203ENST00000409033 DTNBO60941 627 aa15.34■□□□□ 0.05
ATG9A-203ENST00000409033 PROSER3Q2NL68 480 aa15.34■□□□□ 0.05
ATG9A-203ENST00000409033 TTC22Q5TAA0 569 aa15.34■□□□□ 0.05
ATG9A-203ENST00000409033 NAP1L2Q9ULW6 460 aaPredicted RBP15.34■□□□□ 0.05
ATG9A-203ENST00000409033 USP32Q8NFA0 1604 aa15.34■□□□□ 0.05
ATG9A-203ENST00000409033 MX1P20591 662 aa15.34■□□□□ 0.05
ATG9A-203ENST00000409033 NEK4P51957 841 aa15.34■□□□□ 0.05
ATG9A-203ENST00000409033 CHMP5Q9NZZ3 219 aa15.34■□□□□ 0.05
ATG9A-203ENST00000409033 REC8O95072 547 aa15.34■□□□□ 0.05
ATG9A-203ENST00000409033 GSPT1P15170 499 aaKnown RBP15.34■□□□□ 0.05
ATG9A-203ENST00000409033 AMOTQ4VCS5 1084 aa15.34■□□□□ 0.05
ATG9A-203ENST00000409033 AKAP4Q5JQC9 854 aa15.34■□□□□ 0.05
ATG9A-203ENST00000409033 DIP2AQ14689 1571 aa15.34■□□□□ 0.05
ATG9A-203ENST00000409033 FAM177BA6PVY3 158 aa15.33■□□□□ 0.05
ATG9A-203ENST00000409033 RNMTO43148 476 aaKnown RBP15.33■□□□□ 0.05
ATG9A-203ENST00000409033 CADPS2Q86UW7 1296 aa15.33■□□□□ 0.05
ATG9A-203ENST00000409033 SPG7Q9UQ90 795 aa15.33■□□□□ 0.05
ATG9A-203ENST00000409033 MYD88Q99836 296 aa15.33■□□□□ 0.04
ATG9A-203ENST00000409033 UBR1Q8IWV7 1749 aa15.33■□□□□ 0.04
ATG9A-203ENST00000409033 GOLGA6L22H0YM25 854 aa15.33■□□□□ 0.04
ATG9A-203ENST00000409033 DBF4Q9UBU7 674 aaPredicted RBP15.33■□□□□ 0.04
ATG9A-203ENST00000409033 BRPF3Q9ULD4 1205 aa15.33■□□□□ 0.04
ATG9A-203ENST00000409033 RTL1A6NKG5 1358 aa15.33■□□□□ 0.04
ATG9A-203ENST00000409033 ST18O60284 1047 aa15.32■□□□□ 0.04
ATG9A-203ENST00000409033 G3BP1Q13283 466 aaKnown RBP eCLIP15.32■□□□□ 0.04
ATG9A-203ENST00000409033 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.32■□□□□ 0.04
ATG9A-203ENST00000409033 DIAPH3Q9NSV4 1193 aa15.32■□□□□ 0.04
ATG9A-203ENST00000409033 REREQ9P2R6 1566 aa15.32■□□□□ 0.04
ATG9A-203ENST00000409033 RIMS1Q86UR5 1692 aaKnown RBP15.32■□□□□ 0.04
ATG9A-203ENST00000409033 NRXN3Q9Y4C0 1643 aa15.32■□□□□ 0.04
ATG9A-203ENST00000409033 KLHDC4Q8TBB5 520 aa15.32■□□□□ 0.04
ATG9A-203ENST00000409033 FER1L4A9Z1Z3 1794 aa15.31■□□□□ 0.04
ATG9A-203ENST00000409033 NUTM2BA6NNL0 878 aaPredicted RBP15.31■□□□□ 0.04
ATG9A-203ENST00000409033 NUTM2EB1AL46 878 aaPredicted RBP15.31■□□□□ 0.04
ATG9A-203ENST00000409033 CWC27Q6UX04 472 aaKnown RBP15.31■□□□□ 0.04
ATG9A-203ENST00000409033 ARHGEF25Q86VW2 580 aa15.31■□□□□ 0.04
ATG9A-203ENST00000409033 NUTM2AQ8IVF1 878 aaPredicted RBP15.31■□□□□ 0.04
ATG9A-203ENST00000409033 CCDC8Q9H0W5 538 aaPredicted RBP15.31■□□□□ 0.04
ATG9A-203ENST00000409033 ITSN1Q15811 1721 aa15.31■□□□□ 0.04
ATG9A-203ENST00000409033 PDE1AP54750 535 aa15.31■□□□□ 0.04
ATG9A-203ENST00000409033 EIF4A1P60842 406 aaKnown RBP15.31■□□□□ 0.04
ATG9A-203ENST00000409033 CLASRPQ8N2M8 674 aaKnown RBP15.31■□□□□ 0.04
ATG9A-203ENST00000409033 CEP170BQ9Y4F5 1589 aaPredicted RBP15.31■□□□□ 0.04
ATG9A-203ENST00000409033 COPS6Q7L5N1 327 aa15.3■□□□□ 0.04
ATG9A-203ENST00000409033 AACSQ86V21 672 aa15.3■□□□□ 0.04
ATG9A-203ENST00000409033 IL27Q8NEV9 243 aa15.3■□□□□ 0.04
ATG9A-203ENST00000409033 XAGE3Q8WTP9 111 aa15.3■□□□□ 0.04
ATG9A-203ENST00000409033 NEUROD6Q96NK8 337 aa15.3■□□□□ 0.04
ATG9A-203ENST00000409033 ZBTB3Q9H5J0 574 aa15.3■□□□□ 0.04
ATG9A-203ENST00000409033 ADGRB2O60241 1585 aa15.3■□□□□ 0.04
ATG9A-203ENST00000409033 USP31Q70CQ4 1352 aa15.3■□□□□ 0.04
ATG9A-203ENST00000409033 ERC2O15083 957 aa15.29■□□□□ 0.04
ATG9A-203ENST00000409033 ADAMTS2O95450 1211 aa15.29■□□□□ 0.04
ATG9A-203ENST00000409033 NPHP3Q7Z494 1330 aa15.29■□□□□ 0.04
ATG9A-203ENST00000409033 CHMP4AQ9BY43 222 aa15.29■□□□□ 0.04
ATG9A-203ENST00000409033 USP44Q9H0E7 712 aa15.29■□□□□ 0.04
ATG9A-203ENST00000409033 FGD1P98174 961 aa15.29■□□□□ 0.04
ATG9A-203ENST00000409033 GBP4Q96PP9 640 aa15.28■□□□□ 0.04
ATG9A-203ENST00000409033 KIAA0232Q92628 1395 aa15.28■□□□□ 0.04
ATG9A-203ENST00000409033 HTATSF1O43719 755 aaKnown RBP15.28■□□□□ 0.04
ATG9A-203ENST00000409033 K7ELQ4 463 aaPredicted RBP15.28■□□□□ 0.04
ATG9A-203ENST00000409033 TAF7LQ5H9L4 462 aa15.28■□□□□ 0.04
ATG9A-203ENST00000409033 UBE3BQ7Z3V4 1068 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms