RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 MCM10Q7L590 875 aa12.57□□□□□ -0.4
POLR1A-202ENST00000409024 USHBP1Q8N6Y0 703 aa12.57□□□□□ -0.4
POLR1A-202ENST00000409024 ARHGAP45Q92619 1136 aa12.57□□□□□ -0.4
POLR1A-202ENST00000409024 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
POLR1A-202ENST00000409024 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
POLR1A-202ENST00000409024 NLRP2Q9NX02 1062 aa12.57□□□□□ -0.4
POLR1A-202ENST00000409024 NWD2Q9ULI1 1742 aa12.57□□□□□ -0.4
POLR1A-202ENST00000409024 RGPD5Q99666 1765 aa12.56□□□□□ -0.4
POLR1A-202ENST00000409024 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
POLR1A-202ENST00000409024 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
POLR1A-202ENST00000409024 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
POLR1A-202ENST00000409024 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
POLR1A-202ENST00000409024 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
POLR1A-202ENST00000409024 ZNF530Q6P9A1 599 aaPredicted RBP12.56□□□□□ -0.4
POLR1A-202ENST00000409024 FAM196AQ6ZSG2 479 aa12.56□□□□□ -0.4
POLR1A-202ENST00000409024 IL17REQ8NFR9 667 aa12.56□□□□□ -0.4
POLR1A-202ENST00000409024 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
POLR1A-202ENST00000409024 RGPD2P0DJD1 1756 aa12.56□□□□□ -0.4
POLR1A-202ENST00000409024 PLIN1O60240 522 aa12.55□□□□□ -0.4
POLR1A-202ENST00000409024 CHRNA2Q15822 529 aa12.55□□□□□ -0.4
POLR1A-202ENST00000409024 SMC4Q9NTJ3 1288 aa12.55□□□□□ -0.4
POLR1A-202ENST00000409024 BTG4Q9NY30 223 aa12.55□□□□□ -0.4
POLR1A-202ENST00000409024 TSPYL4Q9UJ04 414 aa12.55□□□□□ -0.4
POLR1A-202ENST00000409024 COL14A1Q05707 1796 aaKnown RBP12.54□□□□□ -0.4
POLR1A-202ENST00000409024 EXOC6Q8TAG9 804 aa12.54□□□□□ -0.4
POLR1A-202ENST00000409024 SSH1Q8WYL5 1049 aa12.54□□□□□ -0.4
POLR1A-202ENST00000409024 CCDC136Q96JN2 1154 aa12.54□□□□□ -0.4
POLR1A-202ENST00000409024 CRBNQ96SW2 442 aa12.54□□□□□ -0.4
POLR1A-202ENST00000409024 CHMP4BQ9H444 224 aaKnown RBP12.54□□□□□ -0.4
POLR1A-202ENST00000409024 HOXB7P09629 217 aa12.53□□□□□ -0.4
POLR1A-202ENST00000409024 EVA1CP58658 441 aa12.53□□□□□ -0.4
POLR1A-202ENST00000409024 IFNL2Q8IZJ0 200 aa12.53□□□□□ -0.4
POLR1A-202ENST00000409024 PLCH1Q4KWH8 1693 aa12.53□□□□□ -0.4
POLR1A-202ENST00000409024 ADAMTS7Q9UKP4 1686 aa12.53□□□□□ -0.4
POLR1A-202ENST00000409024 RNMTO43148 476 aaKnown RBP12.52□□□□□ -0.41
POLR1A-202ENST00000409024 TEFQ10587 303 aa12.52□□□□□ -0.41
POLR1A-202ENST00000409024 ATF7IPQ6VMQ6 1270 aa12.52□□□□□ -0.41
POLR1A-202ENST00000409024 TOM1L2Q6ZVM7 507 aa12.52□□□□□ -0.41
POLR1A-202ENST00000409024 MRPL50Q8N5N7 158 aaKnown RBP12.52□□□□□ -0.41
POLR1A-202ENST00000409024 C8orf58Q8NAV2 365 aa12.52□□□□□ -0.41
POLR1A-202ENST00000409024 SPATA31A5Q5VU36 1347 aa12.52□□□□□ -0.41
POLR1A-202ENST00000409024 SPATA31A7Q8IWB4 1347 aa12.52□□□□□ -0.41
POLR1A-202ENST00000409024 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
POLR1A-202ENST00000409024 DZIP1LQ8IYY4 767 aaKnown RBP12.51□□□□□ -0.41
POLR1A-202ENST00000409024 FRAT1Q92837 279 aaPredicted RBP12.51□□□□□ -0.41
POLR1A-202ENST00000409024 PARP4Q9UKK3 1724 aaKnown RBP12.51□□□□□ -0.41
POLR1A-202ENST00000409024 IL2RBP14784 551 aa12.5□□□□□ -0.41
POLR1A-202ENST00000409024 PHKG2P15735 406 aa12.5□□□□□ -0.41
POLR1A-202ENST00000409024 C20orf194Q5TEA3 1177 aa12.5□□□□□ -0.41
POLR1A-202ENST00000409024 TSPYL6Q8N831 410 aa12.5□□□□□ -0.41
POLR1A-202ENST00000409024 DCAF5Q96JK2 942 aa12.5□□□□□ -0.41
POLR1A-202ENST00000409024 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
POLR1A-202ENST00000409024 NOB1Q9ULX3 412 aaKnown RBP12.5□□□□□ -0.41
POLR1A-202ENST00000409024 TNS1Q9HBL0 1735 aaKnown RBP12.5□□□□□ -0.41
POLR1A-202ENST00000409024 MEGF6O75095 1541 aa12.49□□□□□ -0.41
POLR1A-202ENST00000409024 PTPRCP08575 1304 aa12.49□□□□□ -0.41
POLR1A-202ENST00000409024 PCDH11XQ9BZA7 1347 aa12.49□□□□□ -0.41
POLR1A-202ENST00000409024 PCDH11YQ9BZA8 1340 aa12.49□□□□□ -0.41
POLR1A-202ENST00000409024 MVPQ14764 893 aaKnown RBP12.49□□□□□ -0.41
POLR1A-202ENST00000409024 FTSJ3Q8IY81 847 aaKnown RBP12.49□□□□□ -0.41
POLR1A-202ENST00000409024 CDCA7Q9BWT1 371 aaPredicted RBP12.49□□□□□ -0.41
POLR1A-202ENST00000409024 CEP350Q5VT06 3117 aa12.49□□□□□ -0.41
POLR1A-202ENST00000409024 UTRNP46939 3433 aa12.49□□□□□ -0.41
POLR1A-202ENST00000409024 TRIM27P14373 513 aa12.48□□□□□ -0.41
POLR1A-202ENST00000409024 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
POLR1A-202ENST00000409024 CCDC30Q5VVM6 783 aa12.48□□□□□ -0.41
POLR1A-202ENST00000409024 B4GALNT3Q6L9W6 998 aa12.48□□□□□ -0.41
POLR1A-202ENST00000409024 ZCRB1Q8TBF4 217 aaKnown RBP12.48□□□□□ -0.41
POLR1A-202ENST00000409024 BCL2L13Q9BXK5 485 aa12.48□□□□□ -0.41
POLR1A-202ENST00000409024 LGR6Q9HBX8 967 aa12.48□□□□□ -0.41
POLR1A-202ENST00000409024 DDX19BQ9UMR2 479 aa12.48□□□□□ -0.41
POLR1A-202ENST00000409024 THRAP3Q9Y2W1 955 aaKnown RBP12.48□□□□□ -0.41
POLR1A-202ENST00000409024 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
POLR1A-202ENST00000409024 MRC1P22897 1456 aa12.46□□□□□ -0.41
POLR1A-202ENST00000409024 ERVV-2B6SEH9 535 aa12.46□□□□□ -0.41
POLR1A-202ENST00000409024 EIF4A1P60842 406 aaKnown RBP12.46□□□□□ -0.41
POLR1A-202ENST00000409024 LARP1Q6PKG0 1096 aaKnown RBP12.46□□□□□ -0.41
POLR1A-202ENST00000409024 MPRIPQ6WCQ1 1025 aa12.46□□□□□ -0.41
POLR1A-202ENST00000409024 STK31Q9BXU1 1019 aa12.46□□□□□ -0.41
POLR1A-202ENST00000409024 SLC52A2Q9HAB3 445 aa12.46□□□□□ -0.41
POLR1A-202ENST00000409024 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.42
POLR1A-202ENST00000409024 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
POLR1A-202ENST00000409024 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
POLR1A-202ENST00000409024 CENPQQ7L2Z9 268 aaPredicted RBP12.45□□□□□ -0.42
POLR1A-202ENST00000409024 PANK1Q8TE04 598 aa12.45□□□□□ -0.42
POLR1A-202ENST00000409024 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
POLR1A-202ENST00000409024 STRN4Q9NRL3 753 aa12.45□□□□□ -0.42
POLR1A-202ENST00000409024 MIS18AQ9NYP9 233 aa12.45□□□□□ -0.42
POLR1A-202ENST00000409024 COG6Q9Y2V7 657 aa12.45□□□□□ -0.42
POLR1A-202ENST00000409024 SIPA1L3O60292 1781 aaPredicted RBP12.45□□□□□ -0.42
POLR1A-202ENST00000409024 SCN11AQ9UI33 1791 aa12.45□□□□□ -0.42
POLR1A-202ENST00000409024 NRAPQ86VF7 1730 aa12.45□□□□□ -0.42
POLR1A-202ENST00000409024 ABCC4O15439 1325 aa12.44□□□□□ -0.42
POLR1A-202ENST00000409024 SPATA31A1Q5TZJ5 1347 aa12.44□□□□□ -0.42
POLR1A-202ENST00000409024 CYP27B1O15528 508 aa12.44□□□□□ -0.42
POLR1A-202ENST00000409024 THSD7AQ9UPZ6 1657 aa12.44□□□□□ -0.42
POLR1A-202ENST00000409024 KDM6AO15550 1401 aaPredicted RBP12.44□□□□□ -0.42
POLR1A-202ENST00000409024 CACNA1FO60840 1977 aa12.43□□□□□ -0.42
POLR1A-202ENST00000409024 GIGYF1O75420 1035 aaPredicted RBP12.43□□□□□ -0.42
POLR1A-202ENST00000409024 RLBP1P12271 317 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms