RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 PHF14O94880 888 aa17.84■□□□□ 0.45
PRAME-206ENST00000406503 IFNL2Q8IZJ0 200 aa17.83■□□□□ 0.44
PRAME-206ENST00000406503 ATG3Q9NT62 314 aa17.83■□□□□ 0.44
PRAME-206ENST00000406503 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
PRAME-206ENST00000406503 ADCY9O60503 1353 aa17.82■□□□□ 0.44
PRAME-206ENST00000406503 GRIN3BO60391 1043 aa17.82■□□□□ 0.44
PRAME-206ENST00000406503 SSFA2P28290 1259 aa17.82■□□□□ 0.44
PRAME-206ENST00000406503 TNNT2P45379 298 aaPredicted RBP17.82■□□□□ 0.44
PRAME-206ENST00000406503 SLC4A9Q96Q91 983 aa17.82■□□□□ 0.44
PRAME-206ENST00000406503 TMOD3Q9NYL9 352 aa17.82■□□□□ 0.44
PRAME-206ENST00000406503 ATP10DQ9P241 1426 aa17.81■□□□□ 0.44
PRAME-206ENST00000406503 ADAMTS7Q9UKP4 1686 aa17.81■□□□□ 0.44
PRAME-206ENST00000406503 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
PRAME-206ENST00000406503 GIGYF1O75420 1035 aaPredicted RBP17.8■□□□□ 0.44
PRAME-206ENST00000406503 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
PRAME-206ENST00000406503 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
PRAME-206ENST00000406503 HMGB2P26583 209 aaKnown RBP17.79■□□□□ 0.44
PRAME-206ENST00000406503 ARFGEF1Q9Y6D6 1849 aa17.79■□□□□ 0.44
PRAME-206ENST00000406503 GNPATO15228 680 aa17.78■□□□□ 0.44
PRAME-206ENST00000406503 ATP6V1AP38606 617 aa17.78■□□□□ 0.44
PRAME-206ENST00000406503 PANK3Q9H999 370 aa17.78■□□□□ 0.44
PRAME-206ENST00000406503 PXDNLA1KZ92 1463 aa17.77■□□□□ 0.44
PRAME-206ENST00000406503 PCGF6Q9BYE7 350 aa17.77■□□□□ 0.44
PRAME-206ENST00000406503 WWC3Q9ULE0 1092 aa17.76■□□□□ 0.43
PRAME-206ENST00000406503 EIF4G2P78344 907 aaKnown RBP eCLIP17.75■□□□□ 0.43
PRAME-206ENST00000406503 AEBP1Q8IUX7 1158 aa17.75■□□□□ 0.43
PRAME-206ENST00000406503 ERVV-2B6SEH9 535 aa17.74■□□□□ 0.43
PRAME-206ENST00000406503 C10orf71Q711Q0 1435 aa17.73■□□□□ 0.43
PRAME-206ENST00000406503 AFDNP55196 1824 aaKnown RBP17.73■□□□□ 0.43
PRAME-206ENST00000406503 MMP10P09238 476 aa17.72■□□□□ 0.43
PRAME-206ENST00000406503 DCAF5Q96JK2 942 aa17.72■□□□□ 0.43
PRAME-206ENST00000406503 CNTNAP4Q9C0A0 1308 aa17.72■□□□□ 0.43
PRAME-206ENST00000406503 SBF1O95248 1867 aa17.71■□□□□ 0.43
PRAME-206ENST00000406503 UBR2Q8IWV8 1755 aa17.71■□□□□ 0.43
PRAME-206ENST00000406503 ZNF530Q6P9A1 599 aaPredicted RBP17.71■□□□□ 0.43
PRAME-206ENST00000406503 PLEKHO1Q53GL0 409 aaPredicted RBP17.7■□□□□ 0.42
PRAME-206ENST00000406503 RC3H1Q5TC82 1133 aaKnown RBP17.7■□□□□ 0.42
PRAME-206ENST00000406503 RBM42Q9BTD8 480 aaKnown RBP17.7■□□□□ 0.42
PRAME-206ENST00000406503 MRC1P22897 1456 aa17.69■□□□□ 0.42
PRAME-206ENST00000406503 HSP90AB1P08238 724 aaKnown RBP17.69■□□□□ 0.42
PRAME-206ENST00000406503 GYS1P13807 737 aa17.69■□□□□ 0.42
PRAME-206ENST00000406503 ARHGEF1Q92888 912 aaKnown RBP17.69■□□□□ 0.42
PRAME-206ENST00000406503 RTCBQ9Y3I0 505 aaKnown RBP17.69■□□□□ 0.42
PRAME-206ENST00000406503 IL13P35225 146 aa17.68■□□□□ 0.42
PRAME-206ENST00000406503 TRAPPC3LQ5T215 181 aa17.68■□□□□ 0.42
PRAME-206ENST00000406503 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
PRAME-206ENST00000406503 DLEC1Q9Y238 1755 aa17.68■□□□□ 0.42
PRAME-206ENST00000406503 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
PRAME-206ENST00000406503 RPS6KA4O75676 772 aa17.67■□□□□ 0.42
PRAME-206ENST00000406503 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
PRAME-206ENST00000406503 MORC1Q86VD1 984 aa17.67■□□□□ 0.42
PRAME-206ENST00000406503 ZNF526Q8TF50 670 aaPredicted RBP17.67■□□□□ 0.42
PRAME-206ENST00000406503 ADRA2BP18089 450 aa17.66■□□□□ 0.42
PRAME-206ENST00000406503 CABP4P57796 275 aa17.66■□□□□ 0.42
PRAME-206ENST00000406503 AMER1Q5JTC6 1135 aaPredicted RBP17.66■□□□□ 0.42
PRAME-206ENST00000406503 SULT6B1Q6IMI4 303 aa17.66■□□□□ 0.42
PRAME-206ENST00000406503 GPBP1L1Q9HC44 474 aaPredicted RBP17.66■□□□□ 0.42
PRAME-206ENST00000406503 KCPQ6ZWJ8 1503 aa17.66■□□□□ 0.42
PRAME-206ENST00000406503 CCDC88AQ3V6T2 1871 aa17.65■□□□□ 0.42
PRAME-206ENST00000406503 MTHFSP49914 203 aa17.65■□□□□ 0.42
PRAME-206ENST00000406503 NFATC2IPQ8NCF5 419 aa17.65■□□□□ 0.42
PRAME-206ENST00000406503 A0A0G2JLW4 131 aa17.64■□□□□ 0.41
PRAME-206ENST00000406503 PTCD1O75127 700 aaKnown RBP17.64■□□□□ 0.41
PRAME-206ENST00000406503 TGFB2P61812 414 aa17.64■□□□□ 0.41
PRAME-206ENST00000406503 NLGN1Q8N2Q7 840 aa17.64■□□□□ 0.41
PRAME-206ENST00000406503 KIF3CO14782 793 aa17.63■□□□□ 0.41
PRAME-206ENST00000406503 KCNA3P22001 575 aa17.63■□□□□ 0.41
PRAME-206ENST00000406503 CRKLP46109 303 aaKnown RBP17.63■□□□□ 0.41
PRAME-206ENST00000406503 SRP68Q9UHB9 627 aaKnown RBP17.63■□□□□ 0.41
PRAME-206ENST00000406503 RFC4P35249 363 aa17.62■□□□□ 0.41
PRAME-206ENST00000406503 C1orf141Q5JVX7 400 aa17.62■□□□□ 0.41
PRAME-206ENST00000406503 KIF7Q2M1P5 1343 aa17.62■□□□□ 0.41
PRAME-206ENST00000406503 USP42Q9H9J4 1324 aaKnown RBP17.62■□□□□ 0.41
PRAME-206ENST00000406503 COL3A1P02461 1466 aaPredicted RBP17.62■□□□□ 0.41
PRAME-206ENST00000406503 DPEP1P16444 411 aa17.61■□□□□ 0.41
PRAME-206ENST00000406503 DDR1Q08345 913 aa17.61■□□□□ 0.41
PRAME-206ENST00000406503 INTS5Q6P9B9 1019 aaKnown RBP17.61■□□□□ 0.41
PRAME-206ENST00000406503 KNSTRNQ9Y448 316 aa17.61■□□□□ 0.41
PRAME-206ENST00000406503 PCNTO95613 3336 aa17.61■□□□□ 0.41
PRAME-206ENST00000406503 FKBP8Q14318 412 aa17.6■□□□□ 0.41
PRAME-206ENST00000406503 LGR6Q9HBX8 967 aa17.6■□□□□ 0.41
PRAME-206ENST00000406503 CCDC87Q9NVE4 849 aa17.6■□□□□ 0.41
PRAME-206ENST00000406503 BCS1LQ9Y276 419 aa17.6■□□□□ 0.41
PRAME-206ENST00000406503 ANKRD31Q8N7Z5 1873 aa17.6■□□□□ 0.41
PRAME-206ENST00000406503 AKAP4Q5JQC9 854 aa17.59■□□□□ 0.41
PRAME-206ENST00000406503 PER1O15534 1290 aaPredicted RBP17.58■□□□□ 0.4
PRAME-206ENST00000406503 HSPA6P17066 643 aa17.58■□□□□ 0.4
PRAME-206ENST00000406503 CCER1Q8TC90 406 aaPredicted RBP17.58■□□□□ 0.4
PRAME-206ENST00000406503 SLC52A2Q9HAB3 445 aa17.58■□□□□ 0.4
PRAME-206ENST00000406503 PARP3Q9Y6F1 533 aa17.58■□□□□ 0.4
PRAME-206ENST00000406503 WDR90Q96KV7 1748 aa17.58■□□□□ 0.4
PRAME-206ENST00000406503 SCN7AQ01118 1682 aa17.58■□□□□ 0.4
PRAME-206ENST00000406503 DNAJC10Q8IXB1 793 aa17.57■□□□□ 0.4
PRAME-206ENST00000406503 CACNA1SQ13698 1873 aa17.56■□□□□ 0.4
PRAME-206ENST00000406503 SOS1Q07889 1333 aaPredicted RBP17.56■□□□□ 0.4
PRAME-206ENST00000406503 TNRC6CQ9HCJ0 1690 aaKnown RBP17.56■□□□□ 0.4
PRAME-206ENST00000406503 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
PRAME-206ENST00000406503 HMOX1P09601 288 aa17.56■□□□□ 0.4
PRAME-206ENST00000406503 SLC39A6Q13433 755 aa17.56■□□□□ 0.4
PRAME-206ENST00000406503 COL11A2P13942 1736 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms