RNA–Protein interactions for RNA: ENST00000406293.7

SYNGR1-205, Transcript of synaptogyrin 1, humanhuman

TSL 2 BASIC

Gene SYNGR1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-205ENST00000406293 RTL1A6NKG5 1358 aa21.47■■□□□ 1.03
SYNGR1-205ENST00000406293 ITPK1Q13572 414 aa21.46■■□□□ 1.03
SYNGR1-205ENST00000406293 TRAPPC3LQ5T215 181 aa21.46■■□□□ 1.03
SYNGR1-205ENST00000406293 NLGN1Q8N2Q7 840 aa21.46■■□□□ 1.03
SYNGR1-205ENST00000406293 SIN3AQ96ST3 1273 aa21.46■■□□□ 1.03
SYNGR1-205ENST00000406293 CARD11Q9BXL7 1154 aa21.46■■□□□ 1.03
SYNGR1-205ENST00000406293 TMOD3Q9NYL9 352 aa21.45■■□□□ 1.02
SYNGR1-205ENST00000406293 PARP3Q9Y6F1 533 aa21.45■■□□□ 1.02
SYNGR1-205ENST00000406293 RTCBQ9Y3I0 505 aaKnown RBP21.44■■□□□ 1.02
SYNGR1-205ENST00000406293 C10orf71Q711Q0 1435 aa21.44■■□□□ 1.02
SYNGR1-205ENST00000406293 ITGB4P16144 1822 aa21.43■■□□□ 1.02
SYNGR1-205ENST00000406293 PIM2Q9P1W9 311 aa21.43■■□□□ 1.02
SYNGR1-205ENST00000406293 ASAP1Q9ULH1 1129 aa21.43■■□□□ 1.02
SYNGR1-205ENST00000406293 HSP90AB2PQ58FF8 381 aa21.42■■□□□ 1.02
SYNGR1-205ENST00000406293 KIAA1551Q9HCM1 1747 aa21.41■■□□□ 1.02
SYNGR1-205ENST00000406293 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
SYNGR1-205ENST00000406293 PCNTO95613 3336 aa21.41■■□□□ 1.02
SYNGR1-205ENST00000406293 KIF13BQ9NQT8 1826 aa21.41■■□□□ 1.02
SYNGR1-205ENST00000406293 GGNBP2Q9H3C7 697 aa21.4■■□□□ 1.02
SYNGR1-205ENST00000406293 RFC4P35249 363 aa21.39■■□□□ 1.01
SYNGR1-205ENST00000406293 SPG7Q9UQ90 795 aa21.39■■□□□ 1.01
SYNGR1-205ENST00000406293 KCNA3P22001 575 aa21.38■■□□□ 1.01
SYNGR1-205ENST00000406293 ARHGEF1Q92888 912 aaKnown RBP21.38■■□□□ 1.01
SYNGR1-205ENST00000406293 DCAF5Q96JK2 942 aa21.37■■□□□ 1.01
SYNGR1-205ENST00000406293 PKD1L3Q7Z443 1732 aa21.37■■□□□ 1.01
SYNGR1-205ENST00000406293 INSRP06213 1382 aa21.36■■□□□ 1.01
SYNGR1-205ENST00000406293 MAP2P11137 1827 aaKnown RBP21.36■■□□□ 1.01
SYNGR1-205ENST00000406293 GYS1P13807 737 aa21.36■■□□□ 1.01
SYNGR1-205ENST00000406293 NKX1-1Q15270 411 aaPredicted RBP21.36■■□□□ 1.01
SYNGR1-205ENST00000406293 PUS7Q96PZ0 661 aaKnown RBP21.36■■□□□ 1.01
SYNGR1-205ENST00000406293 RBM42Q9BTD8 480 aaKnown RBP21.36■■□□□ 1.01
SYNGR1-205ENST00000406293 ATG3Q9NT62 314 aa21.35■■□□□ 1.01
SYNGR1-205ENST00000406293 C4AP0C0L4 1744 aa21.34■■□□□ 1.01
SYNGR1-205ENST00000406293 TNRC6CQ9HCJ0 1690 aaKnown RBP21.34■■□□□ 1.01
SYNGR1-205ENST00000406293 FYB1O15117 783 aa21.33■■□□□ 1.01
SYNGR1-205ENST00000406293 SLC34A2O95436 690 aa21.33■■□□□ 1.01
SYNGR1-205ENST00000406293 VEGFAP15692 232 aaPredicted RBP21.33■■□□□ 1.01
SYNGR1-205ENST00000406293 ADRA2BP18089 450 aa21.33■■□□□ 1.01
SYNGR1-205ENST00000406293 CHRNA5P30532 468 aa21.33■■□□□ 1.01
SYNGR1-205ENST00000406293 FLT4P35916 1363 aa21.33■■□□□ 1
SYNGR1-205ENST00000406293 ARFGEF1Q9Y6D6 1849 aa21.32■■□□□ 1
SYNGR1-205ENST00000406293 PPM1GO15355 546 aaPredicted RBP21.31■■□□□ 1
SYNGR1-205ENST00000406293 RASSF7Q02833 373 aa21.31■■□□□ 1
SYNGR1-205ENST00000406293 BRCA1P38398 1863 aaKnown RBP21.3■■□□□ 1
SYNGR1-205ENST00000406293 IFNL2Q8IZJ0 200 aa21.3■■□□□ 1
SYNGR1-205ENST00000406293 RPS6KA4O75676 772 aa21.29■■□□□ 1
SYNGR1-205ENST00000406293 RC3H1Q5TC82 1133 aaKnown RBP21.29■■□□□ 1
SYNGR1-205ENST00000406293 MKRN1Q9UHC7 482 aaKnown RBP21.29■■□□□ 1
SYNGR1-205ENST00000406293 GLTPD2A6NH11 291 aa21.27■■□□□ 1
SYNGR1-205ENST00000406293 PHKG2P15735 406 aa21.27■■□□□ 1
SYNGR1-205ENST00000406293 SLC4A9Q96Q91 983 aa21.27■■□□□ 1
SYNGR1-205ENST00000406293 SRP68Q9UHB9 627 aaKnown RBP21.27■■□□□ 1
SYNGR1-205ENST00000406293 EMILIN1Q9Y6C2 1016 aa21.27■■□□□ 1
SYNGR1-205ENST00000406293 CNTNAP4Q9C0A0 1308 aa21.26■□□□□ 0.99
SYNGR1-205ENST00000406293 LMNB1P20700 586 aa21.25■□□□□ 0.99
SYNGR1-205ENST00000406293 FKBP8Q14318 412 aa21.25■□□□□ 0.99
SYNGR1-205ENST00000406293 ZC3H4Q9UPT8 1303 aaKnown RBP21.25■□□□□ 0.99
SYNGR1-205ENST00000406293 DDR1Q08345 913 aa21.24■□□□□ 0.99
SYNGR1-205ENST00000406293 KDRP35968 1356 aa21.23■□□□□ 0.99
SYNGR1-205ENST00000406293 KIF24Q5T7B8 1368 aa21.23■□□□□ 0.99
SYNGR1-205ENST00000406293 ST20-MTHFSA0A0A6YYL1 179 aa21.23■□□□□ 0.99
SYNGR1-205ENST00000406293 FOXN1O15353 648 aa21.23■□□□□ 0.99
SYNGR1-205ENST00000406293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.23■□□□□ 0.99
SYNGR1-205ENST00000406293 SBF1O95248 1867 aa21.23■□□□□ 0.99
SYNGR1-205ENST00000406293 AIDAQ96BJ3 306 aa21.22■□□□□ 0.99
SYNGR1-205ENST00000406293 EYA1Q99502 592 aa21.22■□□□□ 0.99
SYNGR1-205ENST00000406293 TESK2Q96S53 571 aa21.21■□□□□ 0.99
SYNGR1-205ENST00000406293 PTCD1O75127 700 aaKnown RBP21.19■□□□□ 0.98
SYNGR1-205ENST00000406293 DPY19L2Q6NUT2 758 aa21.19■□□□□ 0.98
SYNGR1-205ENST00000406293 PRDM10Q9NQV6 1147 aa21.19■□□□□ 0.98
SYNGR1-205ENST00000406293 CREBZFQ9NS37 354 aa21.19■□□□□ 0.98
SYNGR1-205ENST00000406293 ERVV-2B6SEH9 535 aa21.18■□□□□ 0.98
SYNGR1-205ENST00000406293 SLC24A1O60721 1099 aa21.18■□□□□ 0.98
SYNGR1-205ENST00000406293 CRKLP46109 303 aaKnown RBP21.18■□□□□ 0.98
SYNGR1-205ENST00000406293 CABP4P57796 275 aa21.18■□□□□ 0.98
SYNGR1-205ENST00000406293 FAM161AQ3B820 660 aa21.18■□□□□ 0.98
SYNGR1-205ENST00000406293 USP42Q9H9J4 1324 aaKnown RBP21.18■□□□□ 0.98
SYNGR1-205ENST00000406293 POLRMTO00411 1230 aaKnown RBP21.17■□□□□ 0.98
SYNGR1-205ENST00000406293 CTCFP49711 727 aaPredicted RBP21.17■□□□□ 0.98
SYNGR1-205ENST00000406293 TONSLQ96HA7 1378 aa21.17■□□□□ 0.98
SYNGR1-205ENST00000406293 ZPR1O75312 459 aa21.16■□□□□ 0.98
SYNGR1-205ENST00000406293 KDM6AO15550 1401 aaPredicted RBP21.15■□□□□ 0.98
SYNGR1-205ENST00000406293 NCAPD2Q15021 1401 aa21.15■□□□□ 0.98
SYNGR1-205ENST00000406293 HSP90AB1P08238 724 aaKnown RBP21.15■□□□□ 0.98
SYNGR1-205ENST00000406293 CHADLQ6NUI6 762 aa21.15■□□□□ 0.98
SYNGR1-205ENST00000406293 TTLL6Q8N841 843 aa21.15■□□□□ 0.98
SYNGR1-205ENST00000406293 POTECB2RU33 542 aa21.14■□□□□ 0.97
SYNGR1-205ENST00000406293 KIF20BQ96Q89 1820 aa21.13■□□□□ 0.97
SYNGR1-205ENST00000406293 COL5A3P25940 1745 aaPredicted RBP21.13■□□□□ 0.97
SYNGR1-205ENST00000406293 TM4SF1P30408 202 aa21.13■□□□□ 0.97
SYNGR1-205ENST00000406293 USPL1Q5W0Q7 1092 aa21.13■□□□□ 0.97
SYNGR1-205ENST00000406293 MYH14Q7Z406 1995 aaKnown RBP21.12■□□□□ 0.97
SYNGR1-205ENST00000406293 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
SYNGR1-205ENST00000406293 C2CD5Q86YS7 1000 aa21.12■□□□□ 0.97
SYNGR1-205ENST00000406293 LBX1P52954 281 aa21.11■□□□□ 0.97
SYNGR1-205ENST00000406293 ZNF219Q9P2Y4 722 aaPredicted RBP21.11■□□□□ 0.97
SYNGR1-205ENST00000406293 CNTNAP1P78357 1384 aa21.1■□□□□ 0.97
SYNGR1-205ENST00000406293 TIAM2Q8IVF5 1701 aa21.1■□□□□ 0.97
SYNGR1-205ENST00000406293 ZNF831Q5JPB2 1677 aa21.1■□□□□ 0.97
SYNGR1-205ENST00000406293 NFKBIEO00221 500 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms