RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 RGPD2P0DJD1 1756 aa21.01■□□□□ 0.95
DNMT3A-205ENST00000402667 PLEKHG5O94827 1062 aa21■□□□□ 0.95
DNMT3A-205ENST00000402667 PROSER2Q86WR7 435 aaPredicted RBP21■□□□□ 0.95
DNMT3A-205ENST00000402667 CHMP5Q9NZZ3 219 aa21■□□□□ 0.95
DNMT3A-205ENST00000402667 EIF4A1P60842 406 aaKnown RBP20.99■□□□□ 0.95
DNMT3A-205ENST00000402667 LMOD2Q6P5Q4 547 aa20.99■□□□□ 0.95
DNMT3A-205ENST00000402667 PLEKHO1Q53GL0 409 aaPredicted RBP20.99■□□□□ 0.95
DNMT3A-205ENST00000402667 AKAP4Q5JQC9 854 aa20.99■□□□□ 0.95
DNMT3A-205ENST00000402667 SLIT3O75094 1523 aa20.99■□□□□ 0.95
DNMT3A-205ENST00000402667 MED1Q15648 1581 aaPredicted RBP20.98■□□□□ 0.95
DNMT3A-205ENST00000402667 EIF5BO60841 1220 aaKnown RBP20.98■□□□□ 0.95
DNMT3A-205ENST00000402667 SDSP20132 328 aa20.98■□□□□ 0.95
DNMT3A-205ENST00000402667 ZNF530Q6P9A1 599 aaPredicted RBP20.98■□□□□ 0.95
DNMT3A-205ENST00000402667 PHAXQ9H814 394 aaKnown RBP20.98■□□□□ 0.95
DNMT3A-205ENST00000402667 NCOA3Q9Y6Q9 1424 aa20.97■□□□□ 0.95
DNMT3A-205ENST00000402667 ATP8B2P98198 1209 aa20.97■□□□□ 0.95
DNMT3A-205ENST00000402667 KRT28Q7Z3Y7 464 aa20.97■□□□□ 0.95
DNMT3A-205ENST00000402667 AMOTQ4VCS5 1084 aa20.96■□□□□ 0.95
DNMT3A-205ENST00000402667 EXOC6BQ9Y2D4 811 aa20.96■□□□□ 0.95
DNMT3A-205ENST00000402667 PNMA6EA0A0J9YXQ4 647 aa20.96■□□□□ 0.95
DNMT3A-205ENST00000402667 EIF2S2P20042 333 aaKnown RBP20.96■□□□□ 0.95
DNMT3A-205ENST00000402667 ANKRD24Q8TF21 1146 aa20.96■□□□□ 0.95
DNMT3A-205ENST00000402667 USP44Q9H0E7 712 aa20.96■□□□□ 0.95
DNMT3A-205ENST00000402667 PXDNLA1KZ92 1463 aa20.96■□□□□ 0.95
DNMT3A-205ENST00000402667 KCNQ3O43525 872 aa20.95■□□□□ 0.94
DNMT3A-205ENST00000402667 TEFQ10587 303 aa20.95■□□□□ 0.94
DNMT3A-205ENST00000402667 MPRIPQ6WCQ1 1025 aa20.95■□□□□ 0.94
DNMT3A-205ENST00000402667 OSBPL3Q9H4L5 887 aa20.95■□□□□ 0.94
DNMT3A-205ENST00000402667 HOXB7P09629 217 aa20.95■□□□□ 0.94
DNMT3A-205ENST00000402667 RBM42Q9BTD8 480 aaKnown RBP20.95■□□□□ 0.94
DNMT3A-205ENST00000402667 NCAPD2Q15021 1401 aa20.95■□□□□ 0.94
DNMT3A-205ENST00000402667 C19orf44Q9H6X5 657 aa20.94■□□□□ 0.94
DNMT3A-205ENST00000402667 LRRFIP2Q9Y608 721 aaKnown RBP20.94■□□□□ 0.94
DNMT3A-205ENST00000402667 LMO7Q8WWI1 1683 aa20.94■□□□□ 0.94
DNMT3A-205ENST00000402667 C1orf167Q5SNV9 1468 aa20.94■□□□□ 0.94
DNMT3A-205ENST00000402667 BTBD11A6QL63 1104 aa20.94■□□□□ 0.94
DNMT3A-205ENST00000402667 DDIT3P35638 169 aa20.94■□□□□ 0.94
DNMT3A-205ENST00000402667 PDE1AP54750 535 aa20.94■□□□□ 0.94
DNMT3A-205ENST00000402667 AXIN2Q9Y2T1 843 aa20.94■□□□□ 0.94
DNMT3A-205ENST00000402667 TRPM3Q9HCF6 1732 aaPredicted RBP20.94■□□□□ 0.94
DNMT3A-205ENST00000402667 KDM3BQ7LBC6 1761 aa20.93■□□□□ 0.94
DNMT3A-205ENST00000402667 N4BP2Q86UW6 1770 aaPredicted RBP20.93■□□□□ 0.94
DNMT3A-205ENST00000402667 CD2BP2O95400 341 aaKnown RBP20.93■□□□□ 0.94
DNMT3A-205ENST00000402667 HSP90AB1P08238 724 aaKnown RBP20.93■□□□□ 0.94
DNMT3A-205ENST00000402667 USP26Q9BXU7 913 aa20.93■□□□□ 0.94
DNMT3A-205ENST00000402667 RNMTO43148 476 aaKnown RBP20.92■□□□□ 0.94
DNMT3A-205ENST00000402667 C1orf141Q5JVX7 400 aa20.92■□□□□ 0.94
DNMT3A-205ENST00000402667 LRRCC1Q9C099 1032 aa20.92■□□□□ 0.94
DNMT3A-205ENST00000402667 CHPF2Q9P2E5 772 aa20.92■□□□□ 0.94
DNMT3A-205ENST00000402667 UBTFL1P0CB47 393 aaPredicted RBP20.92■□□□□ 0.94
DNMT3A-205ENST00000402667 CASC1Q6TDU7 716 aa20.92■□□□□ 0.94
DNMT3A-205ENST00000402667 CHMP4AQ9BY43 222 aa20.92■□□□□ 0.94
DNMT3A-205ENST00000402667 PXDNQ92626 1479 aa20.91■□□□□ 0.94
DNMT3A-205ENST00000402667 IBTKQ9P2D0 1353 aaPredicted RBP20.9■□□□□ 0.94
DNMT3A-205ENST00000402667 MCM4P33991 863 aa20.9■□□□□ 0.94
DNMT3A-205ENST00000402667 SALL3Q9BXA9 1300 aa20.9■□□□□ 0.94
DNMT3A-205ENST00000402667 SRCIN1Q9C0H9 1055 aa20.9■□□□□ 0.94
DNMT3A-205ENST00000402667 K7ELQ4 463 aaPredicted RBP20.89■□□□□ 0.94
DNMT3A-205ENST00000402667 KIF1AQ12756 1690 aa20.88■□□□□ 0.93
DNMT3A-205ENST00000402667 MST1RQ04912 1400 aa20.87■□□□□ 0.93
DNMT3A-205ENST00000402667 PI4KAP2A4QPH2 592 aa20.87■□□□□ 0.93
DNMT3A-205ENST00000402667 RABEP1Q15276 862 aa20.87■□□□□ 0.93
DNMT3A-205ENST00000402667 PI4KAP1Q8N8J0 262 aa20.87■□□□□ 0.93
DNMT3A-205ENST00000402667 SSH3Q8TE77 659 aa20.87■□□□□ 0.93
DNMT3A-205ENST00000402667 ANXA1P04083 346 aa20.87■□□□□ 0.93
DNMT3A-205ENST00000402667 ZC3H6P61129 1189 aaKnown RBP20.87■□□□□ 0.93
DNMT3A-205ENST00000402667 DNAAF4Q8WXU2 420 aa20.87■□□□□ 0.93
DNMT3A-205ENST00000402667 OVOS2A0A0G2JMS6 1433 aa20.86■□□□□ 0.93
DNMT3A-205ENST00000402667 MX1P20591 662 aa20.86■□□□□ 0.93
DNMT3A-205ENST00000402667 BEND3Q5T5X7 828 aa20.86■□□□□ 0.93
DNMT3A-205ENST00000402667 TSHZ3Q63HK5 1081 aa20.86■□□□□ 0.93
DNMT3A-205ENST00000402667 CIZ1Q9ULV3 898 aaPredicted RBP20.86■□□□□ 0.93
DNMT3A-205ENST00000402667 CAMTA1Q9Y6Y1 1673 aa20.86■□□□□ 0.93
DNMT3A-205ENST00000402667 REC8O95072 547 aa20.85■□□□□ 0.93
DNMT3A-205ENST00000402667 ERBB3P21860 1342 aa20.85■□□□□ 0.93
DNMT3A-205ENST00000402667 ERC2O15083 957 aa20.84■□□□□ 0.93
DNMT3A-205ENST00000402667 GIGYF1O75420 1035 aaPredicted RBP20.84■□□□□ 0.93
DNMT3A-205ENST00000402667 HSP90AA1P07900 732 aaKnown RBP20.84■□□□□ 0.93
DNMT3A-205ENST00000402667 ATF3P18847 181 aa20.84■□□□□ 0.93
DNMT3A-205ENST00000402667 PPP1R42Q7Z4L9 355 aa20.84■□□□□ 0.93
DNMT3A-205ENST00000402667 DBF4Q9UBU7 674 aaPredicted RBP20.84■□□□□ 0.93
DNMT3A-205ENST00000402667 NBPF7P0C2Y1 421 aaPredicted RBP20.84■□□□□ 0.93
DNMT3A-205ENST00000402667 RGPD5Q99666 1765 aa20.84■□□□□ 0.93
DNMT3A-205ENST00000402667 HEG1Q9ULI3 1381 aa20.83■□□□□ 0.93
DNMT3A-205ENST00000402667 POLA2Q14181 598 aa20.83■□□□□ 0.93
DNMT3A-205ENST00000402667 STAP2Q9UGK3 403 aa20.83■□□□□ 0.93
DNMT3A-205ENST00000402667 ALS2Q96Q42 1657 aa20.83■□□□□ 0.93
DNMT3A-205ENST00000402667 ADCY9O60503 1353 aa20.83■□□□□ 0.92
DNMT3A-205ENST00000402667 FOXD4L1Q9NU39 408 aa20.83■□□□□ 0.92
DNMT3A-205ENST00000402667 TMEM94Q12767 1356 aa20.82■□□□□ 0.92
DNMT3A-205ENST00000402667 DDX17Q92841 729 aaKnown RBP20.82■□□□□ 0.92
DNMT3A-205ENST00000402667 RAB11FIP3O75154 756 aa20.81■□□□□ 0.92
DNMT3A-205ENST00000402667 SURF6O75683 361 aaKnown RBP20.81■□□□□ 0.92
DNMT3A-205ENST00000402667 RAB3GAP1Q15042 981 aa20.81■□□□□ 0.92
DNMT3A-205ENST00000402667 TNPO1Q92973 898 aaKnown RBP20.81■□□□□ 0.92
DNMT3A-205ENST00000402667 IL1RAPL2Q9NP60 686 aa20.81■□□□□ 0.92
DNMT3A-205ENST00000402667 SRGAP3O43295 1099 aa20.8■□□□□ 0.92
DNMT3A-205ENST00000402667 PROSER3Q2NL68 480 aa20.8■□□□□ 0.92
DNMT3A-205ENST00000402667 TUBGCP6Q96RT7 1819 aa20.8■□□□□ 0.92
DNMT3A-205ENST00000402667 PRAMEF22A3QJZ6 481 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms