RNA–Protein interactions for RNA: ENST00000401959.5

SNU13-203, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNU13, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-203ENST00000401959 CCDC30Q5VVM6 783 aa16.54■□□□□ 0.24
SNU13-203ENST00000401959 SKAP1Q86WV1 359 aa16.54■□□□□ 0.24
SNU13-203ENST00000401959 STK31Q9BXU1 1019 aa16.54■□□□□ 0.24
SNU13-203ENST00000401959 LGR6Q9HBX8 967 aa16.54■□□□□ 0.24
SNU13-203ENST00000401959 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
SNU13-203ENST00000401959 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
SNU13-203ENST00000401959 FBXO41Q8TF61 875 aa16.53■□□□□ 0.24
SNU13-203ENST00000401959 CHMP4AQ9BY43 222 aa16.53■□□□□ 0.24
SNU13-203ENST00000401959 RGS12O14924 1447 aa16.53■□□□□ 0.24
SNU13-203ENST00000401959 INTS3Q68E01 1043 aaKnown RBP16.53■□□□□ 0.24
SNU13-203ENST00000401959 BACH2Q9BYV9 841 aa16.53■□□□□ 0.24
SNU13-203ENST00000401959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNU13-203ENST00000401959 PKD1L3Q7Z443 1732 aa16.52■□□□□ 0.24
SNU13-203ENST00000401959 SCN11AQ9UI33 1791 aa16.52■□□□□ 0.24
SNU13-203ENST00000401959 RGS3P49796 1198 aa16.52■□□□□ 0.23
SNU13-203ENST00000401959 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.23
SNU13-203ENST00000401959 SPG7Q9UQ90 795 aa16.52■□□□□ 0.23
SNU13-203ENST00000401959 HOXB7P09629 217 aa16.51■□□□□ 0.23
SNU13-203ENST00000401959 PRDM11Q9NQV5 511 aa16.51■□□□□ 0.23
SNU13-203ENST00000401959 PARP4Q9UKK3 1724 aaKnown RBP16.5■□□□□ 0.23
SNU13-203ENST00000401959 MEGF6O75095 1541 aa16.5■□□□□ 0.23
SNU13-203ENST00000401959 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
SNU13-203ENST00000401959 PDZRN3Q9UPQ7 1066 aa16.5■□□□□ 0.23
SNU13-203ENST00000401959 EIF4A1P60842 406 aaKnown RBP16.49■□□□□ 0.23
SNU13-203ENST00000401959 N4BP2Q86UW6 1770 aaPredicted RBP16.49■□□□□ 0.23
SNU13-203ENST00000401959 WDR17Q8IZU2 1322 aa16.48■□□□□ 0.23
SNU13-203ENST00000401959 FAM161AQ3B820 660 aa16.47■□□□□ 0.23
SNU13-203ENST00000401959 SMC5Q8IY18 1101 aa16.47■□□□□ 0.23
SNU13-203ENST00000401959 COL5A2P05997 1499 aaPredicted RBP16.47■□□□□ 0.23
SNU13-203ENST00000401959 CCT4P50991 539 aaKnown RBP16.46■□□□□ 0.23
SNU13-203ENST00000401959 HDGFL1Q5TGJ6 251 aa16.46■□□□□ 0.23
SNU13-203ENST00000401959 G2E3Q7L622 706 aa16.46■□□□□ 0.23
SNU13-203ENST00000401959 IFNL2Q8IZJ0 200 aa16.46■□□□□ 0.23
SNU13-203ENST00000401959 PHKG2P15735 406 aa16.46■□□□□ 0.23
SNU13-203ENST00000401959 COL22A1Q8NFW1 1626 aaPredicted RBP16.45■□□□□ 0.22
SNU13-203ENST00000401959 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
SNU13-203ENST00000401959 FLIIQ13045 1269 aa16.45■□□□□ 0.22
SNU13-203ENST00000401959 JCADQ9P266 1359 aa16.45■□□□□ 0.22
SNU13-203ENST00000401959 PXDNLA1KZ92 1463 aa16.44■□□□□ 0.22
SNU13-203ENST00000401959 KDM6AO15550 1401 aaPredicted RBP16.44■□□□□ 0.22
SNU13-203ENST00000401959 TOM1L2Q6ZVM7 507 aa16.43■□□□□ 0.22
SNU13-203ENST00000401959 GCC1Q96CN9 775 aa16.43■□□□□ 0.22
SNU13-203ENST00000401959 MRC1P22897 1456 aa16.43■□□□□ 0.22
SNU13-203ENST00000401959 NUTM2BA6NNL0 878 aaPredicted RBP16.43■□□□□ 0.22
SNU13-203ENST00000401959 NUTM2EB1AL46 878 aaPredicted RBP16.43■□□□□ 0.22
SNU13-203ENST00000401959 KCNQ3O43525 872 aa16.43■□□□□ 0.22
SNU13-203ENST00000401959 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
SNU13-203ENST00000401959 FKBP5Q13451 457 aaPredicted RBP16.43■□□□□ 0.22
SNU13-203ENST00000401959 NUTM2AQ8IVF1 878 aaPredicted RBP16.43■□□□□ 0.22
SNU13-203ENST00000401959 NECTIN2Q92692 538 aa16.43■□□□□ 0.22
SNU13-203ENST00000401959 C1orf115Q9H7X2 142 aa16.43■□□□□ 0.22
SNU13-203ENST00000401959 HEG1Q9ULI3 1381 aa16.42■□□□□ 0.22
SNU13-203ENST00000401959 C8orf34Q49A92 452 aa16.42■□□□□ 0.22
SNU13-203ENST00000401959 DCAF5Q96JK2 942 aa16.42■□□□□ 0.22
SNU13-203ENST00000401959 CARD10Q9BWT7 1032 aa16.42■□□□□ 0.22
SNU13-203ENST00000401959 SLC52A2Q9HAB3 445 aa16.42■□□□□ 0.22
SNU13-203ENST00000401959 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
SNU13-203ENST00000401959 F6X3S4 739 aa16.4■□□□□ 0.22
SNU13-203ENST00000401959 EIF2S2P20042 333 aaKnown RBP16.4■□□□□ 0.22
SNU13-203ENST00000401959 NUCB1Q02818 461 aa16.4■□□□□ 0.22
SNU13-203ENST00000401959 SLC4A10Q6U841 1118 aa16.4■□□□□ 0.22
SNU13-203ENST00000401959 RPAP2Q8IXW5 612 aaPredicted RBP16.4■□□□□ 0.22
SNU13-203ENST00000401959 CYP27B1O15528 508 aa16.4■□□□□ 0.22
SNU13-203ENST00000401959 EVA1CP58658 441 aa16.4■□□□□ 0.22
SNU13-203ENST00000401959 PCDH11XQ9BZA7 1347 aa16.39■□□□□ 0.21
SNU13-203ENST00000401959 PCDH11YQ9BZA8 1340 aa16.39■□□□□ 0.21
SNU13-203ENST00000401959 GIGYF1O75420 1035 aaPredicted RBP16.39■□□□□ 0.21
SNU13-203ENST00000401959 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
SNU13-203ENST00000401959 SIRT2Q8IXJ6 389 aa16.39■□□□□ 0.21
SNU13-203ENST00000401959 ANKRD44Q8N8A2 993 aa16.39■□□□□ 0.21
SNU13-203ENST00000401959 ATP10DQ9P241 1426 aa16.39■□□□□ 0.21
SNU13-203ENST00000401959 ZCRB1Q8TBF4 217 aaKnown RBP16.38■□□□□ 0.21
SNU13-203ENST00000401959 MEIS3Q99687 375 aa16.38■□□□□ 0.21
SNU13-203ENST00000401959 CHPF2Q9P2E5 772 aa16.38■□□□□ 0.21
SNU13-203ENST00000401959 DBF4Q9UBU7 674 aaPredicted RBP16.38■□□□□ 0.21
SNU13-203ENST00000401959 LRP6O75581 1613 aa16.38■□□□□ 0.21
SNU13-203ENST00000401959 IL2RBP14784 551 aa16.37■□□□□ 0.21
SNU13-203ENST00000401959 ZNF790Q6PG37 636 aa16.37■□□□□ 0.21
SNU13-203ENST00000401959 CHD1LQ86WJ1 897 aa16.37■□□□□ 0.21
SNU13-203ENST00000401959 STRN4Q9NRL3 753 aa16.37■□□□□ 0.21
SNU13-203ENST00000401959 SHANK3Q9BYB0 1731 aa16.37■□□□□ 0.21
SNU13-203ENST00000401959 GNAI3P08754 354 aa16.37■□□□□ 0.21
SNU13-203ENST00000401959 NFATC2IPQ8NCF5 419 aa16.37■□□□□ 0.21
SNU13-203ENST00000401959 PHAXQ9H814 394 aaKnown RBP16.37■□□□□ 0.21
SNU13-203ENST00000401959 C5P01031 1676 aa16.36■□□□□ 0.21
SNU13-203ENST00000401959 CEP85Q6P2H3 762 aa16.36■□□□□ 0.21
SNU13-203ENST00000401959 LARP1Q6PKG0 1096 aaKnown RBP16.36■□□□□ 0.21
SNU13-203ENST00000401959 HMMRO75330 724 aa16.35■□□□□ 0.21
SNU13-203ENST00000401959 CABP4P57796 275 aa16.35■□□□□ 0.21
SNU13-203ENST00000401959 DCTPP1Q9H773 170 aa16.35■□□□□ 0.21
SNU13-203ENST00000401959 SPATA31A6Q5VVP1 1343 aa16.35■□□□□ 0.21
SNU13-203ENST00000401959 GNAI2P04899 355 aa16.34■□□□□ 0.21
SNU13-203ENST00000401959 ANKRD45Q5TZF3 282 aa16.34■□□□□ 0.21
SNU13-203ENST00000401959 TTC5Q8N0Z6 440 aa16.34■□□□□ 0.21
SNU13-203ENST00000401959 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
SNU13-203ENST00000401959 LNPKQ9C0E8 428 aa16.34■□□□□ 0.21
SNU13-203ENST00000401959 HYPKQ9NX55 129 aa16.34■□□□□ 0.21
SNU13-203ENST00000401959 LAMB4A4D0S4 1761 aa16.33■□□□□ 0.21
SNU13-203ENST00000401959 SLC39A6Q13433 755 aa16.33■□□□□ 0.2
SNU13-203ENST00000401959 NKX1-1Q15270 411 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms