RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 CCDC178Q5BJE1 867 aa9.71□□□□□ -0.86
CHD8-201ENST00000399982 LARP1BQ659C4 914 aaKnown RBP9.71□□□□□ -0.86
CHD8-201ENST00000399982 POTEDQ86YR6 584 aa9.71□□□□□ -0.86
CHD8-201ENST00000399982 EBAG9O00559 213 aa9.71□□□□□ -0.86
CHD8-201ENST00000399982 PSMC4P43686 418 aa9.71□□□□□ -0.86
CHD8-201ENST00000399982 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
CHD8-201ENST00000399982 PPP1R9BQ96SB3 815 aa9.71□□□□□ -0.86
CHD8-201ENST00000399982 CEP131Q9UPN4 1083 aa9.71□□□□□ -0.86
CHD8-201ENST00000399982 RRBP1Q9P2E9 1410 aaKnown RBP9.71□□□□□ -0.86
CHD8-201ENST00000399982 ME1P48163 572 aa9.71□□□□□ -0.86
CHD8-201ENST00000399982 CFAP58Q5T655 872 aa9.71□□□□□ -0.86
CHD8-201ENST00000399982 TSNARE1Q96NA8 513 aa9.71□□□□□ -0.86
CHD8-201ENST00000399982 STMN4Q9H169 189 aaPredicted RBP9.71□□□□□ -0.86
CHD8-201ENST00000399982 GBP6Q6ZN66 633 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 ANKS4BQ8N8V4 417 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 CLIP2Q9UDT6 1046 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 USO1O60763 962 aaKnown RBP9.7□□□□□ -0.86
CHD8-201ENST00000399982 ARFGAP2Q8N6H7 521 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 KIF3CO14782 793 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 EFCAB2Q5VUJ9 269 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 MACROD2A1Z1Q3 448 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 RIPK4P57078 832 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 XPCQ01831 940 aaPredicted RBP9.7□□□□□ -0.86
CHD8-201ENST00000399982 TUBB2AQ13885 445 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 SPA17Q15506 151 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 LARP1Q6PKG0 1096 aaKnown RBP9.7□□□□□ -0.86
CHD8-201ENST00000399982 FERMT2Q96AC1 680 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 TUBB2BQ9BVA1 445 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 AIMP1Q12904 312 aaKnown RBP9.7□□□□□ -0.86
CHD8-201ENST00000399982 DNAJC21Q5F1R6 531 aaKnown RBP9.7□□□□□ -0.86
CHD8-201ENST00000399982 CEP135Q66GS9 1140 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 DDX46Q7L014 1031 aaKnown RBP9.7□□□□□ -0.86
CHD8-201ENST00000399982 CTCFLQ8NI51 663 aaPredicted RBP9.7□□□□□ -0.86
CHD8-201ENST00000399982 RIC3Q7Z5B4 369 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 TRIM22Q8IYM9 498 aa9.7□□□□□ -0.86
CHD8-201ENST00000399982 SNW1Q13573 536 aaKnown RBP9.69□□□□□ -0.86
CHD8-201ENST00000399982 PYM1Q9BRP8 204 aaKnown RBP9.69□□□□□ -0.86
CHD8-201ENST00000399982 CTNNA2P26232 953 aa9.69□□□□□ -0.86
CHD8-201ENST00000399982 TPD52P55327 224 aaPredicted RBP9.69□□□□□ -0.86
CHD8-201ENST00000399982 ZNF354CQ86Y25 554 aa9.69□□□□□ -0.86
CHD8-201ENST00000399982 NOL7Q9UMY1 257 aaKnown RBP9.69□□□□□ -0.86
CHD8-201ENST00000399982 SATB1Q01826 763 aa9.69□□□□□ -0.86
CHD8-201ENST00000399982 MVPQ14764 893 aaKnown RBP9.69□□□□□ -0.86
CHD8-201ENST00000399982 KIF4BQ2VIQ3 1234 aa9.69□□□□□ -0.86
CHD8-201ENST00000399982 FMNL3Q8IVF7 1028 aa9.69□□□□□ -0.86
CHD8-201ENST00000399982 CEP112Q8N8E3 955 aa9.69□□□□□ -0.86
CHD8-201ENST00000399982 COG3Q96JB2 828 aa9.69□□□□□ -0.86
CHD8-201ENST00000399982 URI1O94763 535 aaPredicted RBP9.69□□□□□ -0.86
CHD8-201ENST00000399982 TBC1D2BQ9UPU7 963 aa9.69□□□□□ -0.86
CHD8-201ENST00000399982 FGFR1OPO95684 399 aaKnown RBP9.69□□□□□ -0.86
CHD8-201ENST00000399982 B4GALNT4Q76KP1 1039 aa9.69□□□□□ -0.86
CHD8-201ENST00000399982 VPS36Q86VN1 386 aa9.69□□□□□ -0.86
CHD8-201ENST00000399982 CCT4P50991 539 aaKnown RBP9.69□□□□□ -0.86
CHD8-201ENST00000399982 UBTFL1P0CB47 393 aaPredicted RBP9.68□□□□□ -0.86
CHD8-201ENST00000399982 PANK1Q8TE04 598 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 TTC14Q96N46 770 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 SLU7O95391 586 aaKnown RBP9.68□□□□□ -0.86
CHD8-201ENST00000399982 TOP1P11387 765 aaKnown RBP9.68□□□□□ -0.86
CHD8-201ENST00000399982 ALS2CR12Q96Q35 445 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 MYOM3Q5VTT5 1437 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 CFAP100Q494V2 611 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 LRSAM1Q6UWE0 723 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 CHD1LQ86WJ1 897 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 MIPOL1Q8TD10 442 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 PHAXQ9H814 394 aaKnown RBP9.68□□□□□ -0.86
CHD8-201ENST00000399982 EIF4G1Q04637 1599 aaKnown RBP9.68□□□□□ -0.86
CHD8-201ENST00000399982 KIF5BP33176 963 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 STX1AQ16623 288 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 CCDC88BA6NC98 1476 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 NOLC1Q14978 699 aaKnown RBP eCLIP9.68□□□□□ -0.862e-52■■■■■ 60.4
CHD8-201ENST00000399982 PPP1R14CQ8TAE6 165 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 MRVI1Q9Y6F6 885 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 USH1CQ9Y6N9 552 aa9.68□□□□□ -0.86
CHD8-201ENST00000399982 GOLIM4O00461 696 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 SF3B2Q13435 895 aaKnown RBP9.67□□□□□ -0.86
CHD8-201ENST00000399982 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 NOL3O60936 208 aaKnown RBP9.67□□□□□ -0.86
CHD8-201ENST00000399982 NBPF11Q86T75 865 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 RPAP2Q8IXW5 612 aaPredicted RBP9.67□□□□□ -0.86
CHD8-201ENST00000399982 MKRN1Q9UHC7 482 aaKnown RBP9.67□□□□□ -0.86
CHD8-201ENST00000399982 TOP2AP11388 1531 aaKnown RBP9.67□□□□□ -0.86
CHD8-201ENST00000399982 SMARCA2P51531 1590 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 AKNAQ7Z591 1439 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 PIP4K2BP78356 416 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 MAP3K9P80192 1104 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 MXRA7P84157 204 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 ZSCAN29Q8IWY8 852 aaPredicted RBP9.67□□□□□ -0.86
CHD8-201ENST00000399982 DNA2P51530 1060 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 FKBP5Q13451 457 aaPredicted RBP9.67□□□□□ -0.86
CHD8-201ENST00000399982 SH2D4BQ5SQS7 431 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 PPP4R3AQ6IN85 833 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 MPNDQ8N594 471 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 PIBF1Q8WXW3 757 aa9.67□□□□□ -0.86
CHD8-201ENST00000399982 MSL1Q68DK7 614 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 CTNNA3Q9UI47 895 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 HSF2BPO75031 334 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 EIF5P55010 431 aaKnown RBP9.66□□□□□ -0.86
CHD8-201ENST00000399982 UBE2HP62256 183 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 CCDC57Q2TAC2 916 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 RPUSD2Q8IZ73 545 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms