RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ZBTB7BO15156 539 aaPredicted RBP20.74■□□□□ 0.91
PTPRA-205ENST00000399903 EIF4A2Q14240 407 aaKnown RBP20.74■□□□□ 0.91
PTPRA-205ENST00000399903 CLEC17AQ6ZS10 378 aa20.74■□□□□ 0.91
PTPRA-205ENST00000399903 SIRT2Q8IXJ6 389 aa20.74■□□□□ 0.91
PTPRA-205ENST00000399903 CASC1Q6TDU7 716 aa20.73■□□□□ 0.91
PTPRA-205ENST00000399903 LTV1Q96GA3 475 aaPredicted RBP20.73■□□□□ 0.91
PTPRA-205ENST00000399903 KCNA6P17658 529 aa20.73■□□□□ 0.91
PTPRA-205ENST00000399903 USP26Q9BXU7 913 aa20.73■□□□□ 0.91
PTPRA-205ENST00000399903 MBIPQ9NS73 344 aa20.73■□□□□ 0.91
PTPRA-205ENST00000399903 DLC1Q96QB1 1528 aa20.73■□□□□ 0.91
PTPRA-205ENST00000399903 CWC22Q9HCG8 908 aaKnown RBP20.73■□□□□ 0.91
PTPRA-205ENST00000399903 INTS3Q68E01 1043 aaKnown RBP20.72■□□□□ 0.91
PTPRA-205ENST00000399903 ZNF771Q7L3S4 317 aaPredicted RBP20.72■□□□□ 0.91
PTPRA-205ENST00000399903 PDCL2Q8N4E4 241 aa20.72■□□□□ 0.91
PTPRA-205ENST00000399903 SPC24Q8NBT2 197 aa20.72■□□□□ 0.91
PTPRA-205ENST00000399903 FOXO3O43524 673 aa20.71■□□□□ 0.91
PTPRA-205ENST00000399903 U2AF2P26368 475 aaKnown RBP eCLIP20.71■□□□□ 0.912e-8■■■□□ 17.9
PTPRA-205ENST00000399903 PLEKHM2Q8IWE5 1019 aa20.71■□□□□ 0.91
PTPRA-205ENST00000399903 C8orf58Q8NAV2 365 aa20.71■□□□□ 0.91
PTPRA-205ENST00000399903 GADD45BO75293 160 aaPredicted RBP20.7■□□□□ 0.9
PTPRA-205ENST00000399903 MBD3O95983 291 aa20.7■□□□□ 0.9
PTPRA-205ENST00000399903 CYP2E1P05181 493 aaPredicted RBP20.7■□□□□ 0.9
PTPRA-205ENST00000399903 MED14O60244 1454 aa20.7■□□□□ 0.9
PTPRA-205ENST00000399903 DTNBO60941 627 aa20.7■□□□□ 0.9
PTPRA-205ENST00000399903 ADCY5O95622 1261 aa20.7■□□□□ 0.9
PTPRA-205ENST00000399903 CGNQ9P2M7 1197 aaKnown RBP20.7■□□□□ 0.9
PTPRA-205ENST00000399903 ADGRB2O60241 1585 aa20.69■□□□□ 0.9
PTPRA-205ENST00000399903 BCL2L12Q9HB09 334 aa20.69■□□□□ 0.9
PTPRA-205ENST00000399903 HCLS1P14317 486 aaPredicted RBP20.69■□□□□ 0.9
PTPRA-205ENST00000399903 HMGN5P82970 282 aaKnown RBP20.69■□□□□ 0.9
PTPRA-205ENST00000399903 SYAP1Q96A49 352 aaPredicted RBP20.69■□□□□ 0.9
PTPRA-205ENST00000399903 FAM135BQ49AJ0 1406 aa20.69■□□□□ 0.9
PTPRA-205ENST00000399903 KIF20BQ96Q89 1820 aa20.68■□□□□ 0.9
PTPRA-205ENST00000399903 CHAF1AQ13111 956 aaPredicted RBP20.68■□□□□ 0.9
PTPRA-205ENST00000399903 SDSP20132 328 aa20.68■□□□□ 0.9
PTPRA-205ENST00000399903 THEMISQ8N1K5 641 aaPredicted RBP20.68■□□□□ 0.9
PTPRA-205ENST00000399903 TTC22Q5TAA0 569 aa20.67■□□□□ 0.9
PTPRA-205ENST00000399903 UTP14CQ5TAP6 766 aaKnown RBP20.67■□□□□ 0.9
PTPRA-205ENST00000399903 TSHZ3Q63HK5 1081 aa20.67■□□□□ 0.9
PTPRA-205ENST00000399903 UBR1Q8IWV7 1749 aa20.67■□□□□ 0.9
PTPRA-205ENST00000399903 PLEKHG1Q9ULL1 1385 aa20.67■□□□□ 0.9
PTPRA-205ENST00000399903 VGLL3A8MV65 326 aa20.66■□□□□ 0.9
PTPRA-205ENST00000399903 VAMP4O75379 141 aa20.66■□□□□ 0.9
PTPRA-205ENST00000399903 NLRP6P59044 892 aa20.66■□□□□ 0.9
PTPRA-205ENST00000399903 TMX3Q96JJ7 454 aa20.66■□□□□ 0.9
PTPRA-205ENST00000399903 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
PTPRA-205ENST00000399903 PIBF1Q8WXW3 757 aa20.65■□□□□ 0.9
PTPRA-205ENST00000399903 PRIMPOLQ96LW4 560 aa20.65■□□□□ 0.9
PTPRA-205ENST00000399903 UPF3BQ9BZI7 483 aaKnown RBP20.65■□□□□ 0.9
PTPRA-205ENST00000399903 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.65■□□□□ 0.9
PTPRA-205ENST00000399903 ZBTB22O15209 634 aa20.65■□□□□ 0.9
PTPRA-205ENST00000399903 AMPHP49418 695 aa20.65■□□□□ 0.9
PTPRA-205ENST00000399903 MAP3K19Q56UN5 1328 aa20.64■□□□□ 0.9
PTPRA-205ENST00000399903 CHMP4BQ9H444 224 aaKnown RBP20.64■□□□□ 0.89
PTPRA-205ENST00000399903 TECPR2O15040 1411 aa20.63■□□□□ 0.89
PTPRA-205ENST00000399903 IL16Q14005 1332 aa20.63■□□□□ 0.89
PTPRA-205ENST00000399903 LARP6Q9BRS8 491 aaKnown RBP20.63■□□□□ 0.89
PTPRA-205ENST00000399903 CHMP3Q9Y3E7 222 aa20.63■□□□□ 0.89
PTPRA-205ENST00000399903 REC8O95072 547 aa20.63■□□□□ 0.89
PTPRA-205ENST00000399903 GNAI1P63096 354 aa20.63■□□□□ 0.89
PTPRA-205ENST00000399903 ANKRD26Q9UPS8 1709 aa20.62■□□□□ 0.89
PTPRA-205ENST00000399903 SIRT1Q96EB6 747 aa20.62■□□□□ 0.89
PTPRA-205ENST00000399903 GTPBP4Q9BZE4 634 aaKnown RBP20.62■□□□□ 0.89
PTPRA-205ENST00000399903 CDC42BPGQ6DT37 1551 aa20.62■□□□□ 0.89
PTPRA-205ENST00000399903 RIOK3O14730 519 aaKnown RBP20.62■□□□□ 0.89
PTPRA-205ENST00000399903 PDE4CQ08493 712 aa20.62■□□□□ 0.89
PTPRA-205ENST00000399903 USHBP1Q8N6Y0 703 aa20.62■□□□□ 0.89
PTPRA-205ENST00000399903 PLEKHG3A1L390 1219 aa20.61■□□□□ 0.89
PTPRA-205ENST00000399903 ALDH1L2Q3SY69 923 aa20.61■□□□□ 0.89
PTPRA-205ENST00000399903 USP48Q86UV5 1035 aa20.61■□□□□ 0.89
PTPRA-205ENST00000399903 NECTIN2Q92692 538 aa20.61■□□□□ 0.89
PTPRA-205ENST00000399903 PHF14O94880 888 aa20.61■□□□□ 0.89
PTPRA-205ENST00000399903 ANO2Q9NQ90 1003 aa20.6■□□□□ 0.89
PTPRA-205ENST00000399903 TBX22Q9Y458 520 aa20.6■□□□□ 0.89
PTPRA-205ENST00000399903 USP6P35125 1406 aa20.6■□□□□ 0.89
PTPRA-205ENST00000399903 MRPL50Q8N5N7 158 aaKnown RBP20.6■□□□□ 0.89
PTPRA-205ENST00000399903 CDK11BP21127 795 aaKnown RBP20.6■□□□□ 0.89
PTPRA-205ENST00000399903 LMOD2Q6P5Q4 547 aa20.6■□□□□ 0.89
PTPRA-205ENST00000399903 ABTB2Q8N961 1025 aa20.59■□□□□ 0.89
PTPRA-205ENST00000399903 RILPL2Q969X0 211 aa20.59■□□□□ 0.89
PTPRA-205ENST00000399903 FIBPO43427 364 aa20.59■□□□□ 0.89
PTPRA-205ENST00000399903 TRIM6-TRIM34B2RNG4 842 aa20.58■□□□□ 0.89
PTPRA-205ENST00000399903 ERC2O15083 957 aa20.58■□□□□ 0.89
PTPRA-205ENST00000399903 LETM1O95202 739 aaPredicted RBP20.58■□□□□ 0.89
PTPRA-205ENST00000399903 CFAP44Q96MT7 982 aa20.58■□□□□ 0.89
PTPRA-205ENST00000399903 IFT57Q9NWB7 429 aa20.58■□□□□ 0.89
PTPRA-205ENST00000399903 AATKQ6ZMQ8 1374 aa20.58■□□□□ 0.89
PTPRA-205ENST00000399903 CDK12Q9NYV4 1490 aaPredicted RBP20.57■□□□□ 0.88
PTPRA-205ENST00000399903 KIF20AO95235 890 aa20.57■□□□□ 0.88
PTPRA-205ENST00000399903 GIMAP6Q6P9H5 292 aa20.57■□□□□ 0.88
PTPRA-205ENST00000399903 PYCARDQ9ULZ3 195 aa20.57■□□□□ 0.88
PTPRA-205ENST00000399903 DRC7Q8IY82 874 aa20.56■□□□□ 0.88
PTPRA-205ENST00000399903 MTHFSDQ2M296 383 aaKnown RBP20.56■□□□□ 0.88
PTPRA-205ENST00000399903 ZNF592Q92610 1267 aa20.56■□□□□ 0.88
PTPRA-205ENST00000399903 CNPY2Q9Y2B0 182 aa20.56■□□□□ 0.88
PTPRA-205ENST00000399903 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
PTPRA-205ENST00000399903 EYA1Q99502 592 aa20.55■□□□□ 0.88
PTPRA-205ENST00000399903 DIAPH3Q9NSV4 1193 aa20.55■□□□□ 0.88
PTPRA-205ENST00000399903 ZNF853P0CG23 659 aa20.55■□□□□ 0.88
PTPRA-205ENST00000399903 GTF2E1P29083 439 aaPredicted RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms