RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 CDK13Q14004 1512 aaKnown RBP17.8■□□□□ 0.44
UBXN2B-201ENST00000399598 ABCC11Q96J66 1382 aa17.8■□□□□ 0.44
UBXN2B-201ENST00000399598 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
UBXN2B-201ENST00000399598 USHBP1Q8N6Y0 703 aa17.8■□□□□ 0.44
UBXN2B-201ENST00000399598 WASF1Q92558 559 aa17.8■□□□□ 0.44
UBXN2B-201ENST00000399598 GUCY1B3Q02153 619 aa17.8■□□□□ 0.44
UBXN2B-201ENST00000399598 PDCL2Q8N4E4 241 aa17.8■□□□□ 0.44
UBXN2B-201ENST00000399598 CCDC183Q5T5S1 534 aa17.8■□□□□ 0.44
UBXN2B-201ENST00000399598 LARP1Q6PKG0 1096 aaKnown RBP17.8■□□□□ 0.44
UBXN2B-201ENST00000399598 NUTM2BA6NNL0 878 aaPredicted RBP17.79■□□□□ 0.44
UBXN2B-201ENST00000399598 NUTM2EB1AL46 878 aaPredicted RBP17.79■□□□□ 0.44
UBXN2B-201ENST00000399598 NUTM2AQ8IVF1 878 aaPredicted RBP17.79■□□□□ 0.44
UBXN2B-201ENST00000399598 GDPD2Q9HCC8 539 aa17.79■□□□□ 0.44
UBXN2B-201ENST00000399598 BICDL1Q6ZP65 573 aa17.79■□□□□ 0.44
UBXN2B-201ENST00000399598 POLA1P09884 1462 aaPredicted RBP17.79■□□□□ 0.44
UBXN2B-201ENST00000399598 RRP9O43818 475 aaKnown RBP17.78■□□□□ 0.44
UBXN2B-201ENST00000399598 SH2B1Q9NRF2 756 aaPredicted RBP17.78■□□□□ 0.44
UBXN2B-201ENST00000399598 RBM5P52756 815 aaKnown RBP eCLIP17.78■□□□□ 0.44
UBXN2B-201ENST00000399598 CKAP2LQ8IYA6 745 aa17.78■□□□□ 0.44
UBXN2B-201ENST00000399598 MYD88Q99836 296 aa17.78■□□□□ 0.44
UBXN2B-201ENST00000399598 USP25Q9UHP3 1055 aa17.78■□□□□ 0.44
UBXN2B-201ENST00000399598 IGHMBP2P38935 993 aaKnown RBP17.78■□□□□ 0.44
UBXN2B-201ENST00000399598 PTPN14Q15678 1187 aa17.78■□□□□ 0.44
UBXN2B-201ENST00000399598 KLHL10Q6JEL2 608 aa17.78■□□□□ 0.44
UBXN2B-201ENST00000399598 TXLNBQ8N3L3 684 aa17.78■□□□□ 0.44
UBXN2B-201ENST00000399598 CCDC102AQ96A19 550 aa17.78■□□□□ 0.44
UBXN2B-201ENST00000399598 IFIT1P09914 478 aaKnown RBP17.77■□□□□ 0.44
UBXN2B-201ENST00000399598 CCDC82Q8N4S0 544 aa17.77■□□□□ 0.44
UBXN2B-201ENST00000399598 LIMCH1Q9UPQ0 1083 aa17.77■□□□□ 0.44
UBXN2B-201ENST00000399598 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
UBXN2B-201ENST00000399598 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.44
UBXN2B-201ENST00000399598 SEPT11Q9NVA2 429 aaKnown RBP17.77■□□□□ 0.44
UBXN2B-201ENST00000399598 EPRSP07814 1512 aaKnown RBP17.77■□□□□ 0.44
UBXN2B-201ENST00000399598 KIAA0754O94854 1291 aa17.77■□□□□ 0.43
UBXN2B-201ENST00000399598 ANO10Q9NW15 660 aa17.77■□□□□ 0.43
UBXN2B-201ENST00000399598 MINDY4BA8MYZ0 360 aa17.76■□□□□ 0.43
UBXN2B-201ENST00000399598 ADGRF5Q8IZF2 1346 aa17.76■□□□□ 0.43
UBXN2B-201ENST00000399598 USP5P45974 858 aa17.76■□□□□ 0.43
UBXN2B-201ENST00000399598 TBC1D9Q6ZT07 1266 aa17.76■□□□□ 0.43
UBXN2B-201ENST00000399598 KIAA1328Q86T90 577 aa17.76■□□□□ 0.43
UBXN2B-201ENST00000399598 KCNH5Q8NCM2 988 aa17.76■□□□□ 0.43
UBXN2B-201ENST00000399598 C8orf76Q96K31 380 aa17.76■□□□□ 0.43
UBXN2B-201ENST00000399598 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
UBXN2B-201ENST00000399598 TAX1BP1Q86VP1 789 aa17.76■□□□□ 0.43
UBXN2B-201ENST00000399598 DNAAF4Q8WXU2 420 aa17.76■□□□□ 0.43
UBXN2B-201ENST00000399598 IGHDP01880 384 aa17.76■□□□□ 0.43
UBXN2B-201ENST00000399598 STARD3NLO95772 234 aa17.75■□□□□ 0.43
UBXN2B-201ENST00000399598 MPRIPQ6WCQ1 1025 aa17.75■□□□□ 0.43
UBXN2B-201ENST00000399598 AKAP2Q9Y2D5 859 aa17.75■□□□□ 0.43
UBXN2B-201ENST00000399598 ERICH4A6NGS2 130 aa17.75■□□□□ 0.43
UBXN2B-201ENST00000399598 TFIP11Q9UBB9 837 aaKnown RBP17.75■□□□□ 0.43
UBXN2B-201ENST00000399598 CEP131Q9UPN4 1083 aa17.74■□□□□ 0.43
UBXN2B-201ENST00000399598 SUPT6HQ7KZ85 1726 aaKnown RBP17.74■□□□□ 0.43
UBXN2B-201ENST00000399598 FLIIQ13045 1269 aa17.74■□□□□ 0.43
UBXN2B-201ENST00000399598 PAF1Q8N7H5 531 aa17.74■□□□□ 0.43
UBXN2B-201ENST00000399598 NAPBQ9H115 298 aa17.74■□□□□ 0.43
UBXN2B-201ENST00000399598 PKNOX2Q96KN3 472 aa17.74■□□□□ 0.43
UBXN2B-201ENST00000399598 TOP2BQ02880 1626 aa17.74■□□□□ 0.43
UBXN2B-201ENST00000399598 BMP2KLQ5H9B9 411 aa17.73■□□□□ 0.43
UBXN2B-201ENST00000399598 ARHGEF11O15085 1522 aa17.73■□□□□ 0.43
UBXN2B-201ENST00000399598 PPP1R1BQ9UD71 204 aaPredicted RBP17.73■□□□□ 0.43
UBXN2B-201ENST00000399598 TSHZ3Q63HK5 1081 aa17.73■□□□□ 0.43
UBXN2B-201ENST00000399598 IQCEQ6IPM2 695 aa17.73■□□□□ 0.43
UBXN2B-201ENST00000399598 SNAPC4Q5SXM2 1469 aa17.73■□□□□ 0.43
UBXN2B-201ENST00000399598 TMCO3Q6UWJ1 677 aa17.73■□□□□ 0.43
UBXN2B-201ENST00000399598 URI1O94763 535 aaPredicted RBP17.72■□□□□ 0.43
UBXN2B-201ENST00000399598 KIF18AQ8NI77 898 aa17.72■□□□□ 0.43
UBXN2B-201ENST00000399598 CLIP2Q9UDT6 1046 aa17.72■□□□□ 0.43
UBXN2B-201ENST00000399598 CCT2P78371 535 aaKnown RBP17.72■□□□□ 0.43
UBXN2B-201ENST00000399598 KIF2AO00139 706 aaPredicted RBP17.72■□□□□ 0.43
UBXN2B-201ENST00000399598 SEPT7Q16181 437 aaKnown RBP17.72■□□□□ 0.43
UBXN2B-201ENST00000399598 IFT140Q96RY7 1462 aa17.72■□□□□ 0.43
UBXN2B-201ENST00000399598 ANKRD62A6NC57 917 aa17.72■□□□□ 0.43
UBXN2B-201ENST00000399598 NCOA1Q15788 1441 aa17.72■□□□□ 0.43
UBXN2B-201ENST00000399598 ZNF76P36508 570 aa17.71■□□□□ 0.43
UBXN2B-201ENST00000399598 WWC2Q6AWC2 1192 aa17.71■□□□□ 0.43
UBXN2B-201ENST00000399598 ABCC5O15440 1437 aa17.71■□□□□ 0.43
UBXN2B-201ENST00000399598 PLCD4Q9BRC7 762 aa17.71■□□□□ 0.43
UBXN2B-201ENST00000399598 HSP90AB3PQ58FF7 597 aa17.71■□□□□ 0.43
UBXN2B-201ENST00000399598 TAF4BQ92750 862 aa17.71■□□□□ 0.43
UBXN2B-201ENST00000399598 TOP1P11387 765 aaKnown RBP17.71■□□□□ 0.43
UBXN2B-201ENST00000399598 ENOX2Q16206 610 aaKnown RBP17.71■□□□□ 0.43
UBXN2B-201ENST00000399598 TRMT1Q9NXH9 659 aaKnown RBP17.71■□□□□ 0.43
UBXN2B-201ENST00000399598 DBF4Q9UBU7 674 aaPredicted RBP17.71■□□□□ 0.43
UBXN2B-201ENST00000399598 CCDC141Q6ZP82 1450 aa17.71■□□□□ 0.42
UBXN2B-201ENST00000399598 BAG4O95429 457 aaKnown RBP17.7■□□□□ 0.42
UBXN2B-201ENST00000399598 TAF3Q5VWG9 929 aa17.7■□□□□ 0.42
UBXN2B-201ENST00000399598 TBC1D32Q96NH3 1257 aa17.7■□□□□ 0.42
UBXN2B-201ENST00000399598 ECHDC1Q9NTX5 307 aa17.7■□□□□ 0.42
UBXN2B-201ENST00000399598 ZSCAN12O43309 604 aa17.7■□□□□ 0.42
UBXN2B-201ENST00000399598 DHX37Q8IY37 1157 aaKnown RBP17.7■□□□□ 0.42
UBXN2B-201ENST00000399598 A0A087WZG4 1122 aa17.7■□□□□ 0.42
UBXN2B-201ENST00000399598 HMGB1P09429 215 aaKnown RBP17.7■□□□□ 0.42
UBXN2B-201ENST00000399598 IFIT5Q13325 482 aaKnown RBP17.7■□□□□ 0.42
UBXN2B-201ENST00000399598 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
UBXN2B-201ENST00000399598 FAM83GA6ND36 823 aa17.7■□□□□ 0.42
UBXN2B-201ENST00000399598 ZNF213O14771 459 aa17.69■□□□□ 0.42
UBXN2B-201ENST00000399598 C16orf45Q96MC5 204 aaPredicted RBP17.69■□□□□ 0.42
UBXN2B-201ENST00000399598 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
UBXN2B-201ENST00000399598 KIF4BQ2VIQ3 1234 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms