RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 TOM1L2Q6ZVM7 507 aa16.4■□□□□ 0.22
SMIM11A-201ENST00000399292 COL5A2P05997 1499 aaPredicted RBP16.4■□□□□ 0.22
SMIM11A-201ENST00000399292 CSB-PGBD3P0DP91 1061 aa16.39■□□□□ 0.21
SMIM11A-201ENST00000399292 LMO7Q8WWI1 1683 aa16.39■□□□□ 0.21
SMIM11A-201ENST00000399292 BRWD3Q6RI45 1802 aa16.38■□□□□ 0.21
SMIM11A-201ENST00000399292 CRB1P82279 1406 aa16.38■□□□□ 0.21
SMIM11A-201ENST00000399292 PSDA5PKW4 1024 aaPredicted RBP16.38■□□□□ 0.21
SMIM11A-201ENST00000399292 WDR17Q8IZU2 1322 aa16.38■□□□□ 0.21
SMIM11A-201ENST00000399292 ANKRD36BQ8N2N9 1353 aa16.38■□□□□ 0.21
SMIM11A-201ENST00000399292 MON2Q7Z3U7 1717 aa16.37■□□□□ 0.21
SMIM11A-201ENST00000399292 POTEEQ6S8J3 1075 aa16.37■□□□□ 0.21
SMIM11A-201ENST00000399292 FAM196AQ6ZSG2 479 aa16.37■□□□□ 0.21
SMIM11A-201ENST00000399292 DEFB132Q7Z7B7 95 aa16.37■□□□□ 0.21
SMIM11A-201ENST00000399292 COG3Q96JB2 828 aa16.37■□□□□ 0.21
SMIM11A-201ENST00000399292 CRISPLD2Q9H0B8 497 aa16.37■□□□□ 0.21
SMIM11A-201ENST00000399292 EIF4G2P78344 907 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMIM11A-201ENST00000399292 GTPBP6O43824 516 aaPredicted RBP16.35■□□□□ 0.21
SMIM11A-201ENST00000399292 CARD10Q9BWT7 1032 aa16.35■□□□□ 0.21
SMIM11A-201ENST00000399292 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
SMIM11A-201ENST00000399292 TBC1D12O60347 775 aa16.34■□□□□ 0.21
SMIM11A-201ENST00000399292 BAG6P46379 1132 aa16.34■□□□□ 0.21
SMIM11A-201ENST00000399292 NFAT5O94916 1531 aa16.34■□□□□ 0.21
SMIM11A-201ENST00000399292 DDB1Q16531 1140 aa16.33■□□□□ 0.2
SMIM11A-201ENST00000399292 CDCA7Q9BWT1 371 aaPredicted RBP16.33■□□□□ 0.2
SMIM11A-201ENST00000399292 FYB1O15117 783 aa16.32■□□□□ 0.2
SMIM11A-201ENST00000399292 TRIM37O94972 964 aa16.32■□□□□ 0.2
SMIM11A-201ENST00000399292 COL18A1P39060 1754 aa16.32■□□□□ 0.2
SMIM11A-201ENST00000399292 OVOS2A0A0J9YW53 1432 aa16.31■□□□□ 0.2
SMIM11A-201ENST00000399292 OVOS2Q6IE36 1432 aa16.31■□□□□ 0.2
SMIM11A-201ENST00000399292 C11orf95C9JLR9 678 aaPredicted RBP16.31■□□□□ 0.2
SMIM11A-201ENST00000399292 HSPA5P11021 654 aaKnown RBP16.31■□□□□ 0.2
SMIM11A-201ENST00000399292 IP6K1Q92551 441 aa16.31■□□□□ 0.2
SMIM11A-201ENST00000399292 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
SMIM11A-201ENST00000399292 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
SMIM11A-201ENST00000399292 GGNBP2Q9H3C7 697 aa16.3■□□□□ 0.2
SMIM11A-201ENST00000399292 NLRP2Q9NX02 1062 aa16.3■□□□□ 0.2
SMIM11A-201ENST00000399292 EXOC5O00471 708 aa16.29■□□□□ 0.2
SMIM11A-201ENST00000399292 FBLN1P23142 703 aa16.29■□□□□ 0.2
SMIM11A-201ENST00000399292 EN1Q05925 392 aaPredicted RBP16.29■□□□□ 0.2
SMIM11A-201ENST00000399292 CARD14Q9BXL6 1004 aa16.29■□□□□ 0.2
SMIM11A-201ENST00000399292 CCDC7Q96M83 1385 aa16.28■□□□□ 0.2
SMIM11A-201ENST00000399292 APBA3O96018 575 aa16.28■□□□□ 0.2
SMIM11A-201ENST00000399292 AMPHP49418 695 aa16.28■□□□□ 0.2
SMIM11A-201ENST00000399292 PPP1R15BQ5SWA1 713 aa16.28■□□□□ 0.2
SMIM11A-201ENST00000399292 OXER1Q8TDS5 423 aa16.28■□□□□ 0.2
SMIM11A-201ENST00000399292 ABCC6O95255 1503 aa16.28■□□□□ 0.2
SMIM11A-201ENST00000399292 USP54Q70EL1 1684 aa16.27■□□□□ 0.2
SMIM11A-201ENST00000399292 MAP3K19Q56UN5 1328 aa16.27■□□□□ 0.2
SMIM11A-201ENST00000399292 PDE4AP27815 886 aa16.27■□□□□ 0.2
SMIM11A-201ENST00000399292 ARHGAP33O14559 1287 aa16.26■□□□□ 0.19
SMIM11A-201ENST00000399292 LTV1Q96GA3 475 aaPredicted RBP16.26■□□□□ 0.19
SMIM11A-201ENST00000399292 HOXC9P31274 260 aa16.25■□□□□ 0.19
SMIM11A-201ENST00000399292 RRS1Q15050 365 aaKnown RBP16.24■□□□□ 0.19
SMIM11A-201ENST00000399292 MARCH10Q8NA82 808 aaPredicted RBP16.24■□□□□ 0.19
SMIM11A-201ENST00000399292 OVOS2A0A0G2JMS6 1433 aa16.23■□□□□ 0.19
SMIM11A-201ENST00000399292 NSD3Q9BZ95 1437 aa16.23■□□□□ 0.19
SMIM11A-201ENST00000399292 IL2RBP14784 551 aa16.23■□□□□ 0.19
SMIM11A-201ENST00000399292 EZH2Q15910 746 aaKnown RBP16.23■□□□□ 0.19
SMIM11A-201ENST00000399292 PPP4R3BQ5MIZ7 849 aa16.23■□□□□ 0.19
SMIM11A-201ENST00000399292 CAMKK2Q96RR4 588 aa16.23■□□□□ 0.19
SMIM11A-201ENST00000399292 RGPD5Q99666 1765 aa16.23■□□□□ 0.19
SMIM11A-201ENST00000399292 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
SMIM11A-201ENST00000399292 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
SMIM11A-201ENST00000399292 DISP2A7MBM2 1401 aa16.22■□□□□ 0.19
SMIM11A-201ENST00000399292 PANK3Q9H999 370 aa16.21■□□□□ 0.19
SMIM11A-201ENST00000399292 RGPD1P0DJD0 1748 aa16.2■□□□□ 0.18
SMIM11A-201ENST00000399292 LTN1O94822 1766 aa16.2■□□□□ 0.18
SMIM11A-201ENST00000399292 RTL1A6NKG5 1358 aa16.19■□□□□ 0.18
SMIM11A-201ENST00000399292 PARD3Q8TEW0 1356 aa16.19■□□□□ 0.18
SMIM11A-201ENST00000399292 HSP90AB2PQ58FF8 381 aa16.18■□□□□ 0.18
SMIM11A-201ENST00000399292 LRRC37A3O60309 1634 aa16.17■□□□□ 0.18
SMIM11A-201ENST00000399292 PLSCR1O15162 318 aa16.17■□□□□ 0.18
SMIM11A-201ENST00000399292 ADGRD1Q6QNK2 874 aa16.17■□□□□ 0.18
SMIM11A-201ENST00000399292 BCL9O00512 1426 aa16.17■□□□□ 0.18
SMIM11A-201ENST00000399292 KIF24Q5T7B8 1368 aa16.16■□□□□ 0.18
SMIM11A-201ENST00000399292 MYOM1P52179 1685 aa16.16■□□□□ 0.18
SMIM11A-201ENST00000399292 PPM1GO15355 546 aaPredicted RBP16.16■□□□□ 0.18
SMIM11A-201ENST00000399292 NBPF6Q5VWK0 638 aa16.16■□□□□ 0.18
SMIM11A-201ENST00000399292 PTF1AQ7RTS3 328 aa16.16■□□□□ 0.18
SMIM11A-201ENST00000399292 NBPF4Q96M43 638 aa16.16■□□□□ 0.18
SMIM11A-201ENST00000399292 LARP6Q9BRS8 491 aaKnown RBP16.16■□□□□ 0.18
SMIM11A-201ENST00000399292 TNS2Q63HR2 1409 aa16.16■□□□□ 0.18
SMIM11A-201ENST00000399292 INSRP06213 1382 aa16.15■□□□□ 0.18
SMIM11A-201ENST00000399292 FLT4P35916 1363 aa16.15■□□□□ 0.18
SMIM11A-201ENST00000399292 PSEN2P49810 448 aa16.15■□□□□ 0.18
SMIM11A-201ENST00000399292 NBPF14Q5TI25 921 aa16.15■□□□□ 0.18
SMIM11A-201ENST00000399292 DDX54Q8TDD1 881 aaKnown RBP16.15■□□□□ 0.18
SMIM11A-201ENST00000399292 EMILIN1Q9Y6C2 1016 aa16.15■□□□□ 0.18
SMIM11A-201ENST00000399292 TNS1Q9HBL0 1735 aaKnown RBP16.14■□□□□ 0.17
SMIM11A-201ENST00000399292 SMG6Q86US8 1419 aaKnown RBP16.14■□□□□ 0.17
SMIM11A-201ENST00000399292 TK2O00142 265 aa16.14■□□□□ 0.17
SMIM11A-201ENST00000399292 R3HDM1Q15032 1099 aaKnown RBP16.14■□□□□ 0.17
SMIM11A-201ENST00000399292 DDX27Q96GQ7 796 aaKnown RBP16.14■□□□□ 0.17
SMIM11A-201ENST00000399292 KCNQ2O43526 872 aa16.13■□□□□ 0.17
SMIM11A-201ENST00000399292 MFSD10Q14728 455 aa16.13■□□□□ 0.17
SMIM11A-201ENST00000399292 DMRTA1Q5VZB9 504 aa16.13■□□□□ 0.17
SMIM11A-201ENST00000399292 ZCRB1Q8TBF4 217 aaKnown RBP16.13■□□□□ 0.17
SMIM11A-201ENST00000399292 ACSBG1Q96GR2 724 aa16.13■□□□□ 0.17
SMIM11A-201ENST00000399292 PEAK1Q9H792 1746 aa16.13■□□□□ 0.17
SMIM11A-201ENST00000399292 TNNT2P45379 298 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms