RNA–Protein interactions for RNA: ENST00000398782.2

RRBP1-205, Transcript of ribosome binding protein 1, human

APPRIS ALT2 TSL 2

Gene RRBP1, Length 1,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRBP1-205	ENST00000398782	ATP6V1A	P38606	617 aa		32.96	■■■□□ 2.87
RRBP1-205	ENST00000398782	CABP4	P57796	275 aa		32.96	■■■□□ 2.87
RRBP1-205	ENST00000398782	ZNF831	Q5JPB2	1677 aa		32.95	■■■□□ 2.87
RRBP1-205	ENST00000398782	ITPK1	Q13572	414 aa		32.95	■■■□□ 2.87
RRBP1-205	ENST00000398782	COL3A1	P02461	1466 aa	Predicted RBP	32.94	■■■□□ 2.86
RRBP1-205	ENST00000398782	AKAP4	Q5JQC9	854 aa		32.94	■■■□□ 2.86
RRBP1-205	ENST00000398782	SSFA2	P28290	1259 aa		32.93	■■■□□ 2.86
RRBP1-205	ENST00000398782	HMOX1	P09601	288 aa		32.92	■■■□□ 2.86
RRBP1-205	ENST00000398782	AMIGO3	Q86WK7	504 aa		32.92	■■■□□ 2.86
RRBP1-205	ENST00000398782	UBR3	Q6ZT12	1888 aa		32.92	■■■□□ 2.86
RRBP1-205	ENST00000398782	UTRN	P46939	3433 aa		32.9	■■■□□ 2.86
RRBP1-205	ENST00000398782	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.9	■■■□□ 2.86
RRBP1-205	ENST00000398782	NFATC2IP	Q8NCF5	419 aa		32.89	■■■□□ 2.86
RRBP1-205	ENST00000398782	SLC4A9	Q96Q91	983 aa		32.89	■■■□□ 2.86
RRBP1-205	ENST00000398782	CNGB1	Q14028	1251 aa	Predicted RBP	32.88	■■■□□ 2.85
RRBP1-205	ENST00000398782	SCN11A	Q9UI33	1791 aa		32.86	■■■□□ 2.85
RRBP1-205	ENST00000398782	MSL1	Q68DK7	614 aa		32.86	■■■□□ 2.85
RRBP1-205	ENST00000398782	RBM42	Q9BTD8	480 aa	Known RBP	32.86	■■■□□ 2.85
RRBP1-205	ENST00000398782	GNPAT	O15228	680 aa		32.85	■■■□□ 2.85
RRBP1-205	ENST00000398782	PHF14	O94880	888 aa		32.85	■■■□□ 2.85
RRBP1-205	ENST00000398782	YY1	P25490	414 aa		32.85	■■■□□ 2.85
RRBP1-205	ENST00000398782	RC3H1	Q5TC82	1133 aa	Known RBP	32.85	■■■□□ 2.85
RRBP1-205	ENST00000398782	MTHFSD	Q2M296	383 aa	Known RBP	32.84	■■■□□ 2.85
RRBP1-205	ENST00000398782	CNTNAP4	Q9C0A0	1308 aa		32.82	■■■□□ 2.84
RRBP1-205	ENST00000398782	KLHL34	Q8N239	644 aa		32.82	■■■□□ 2.84
RRBP1-205	ENST00000398782	CFAP53	Q96M91	514 aa		32.82	■■■□□ 2.84
RRBP1-205	ENST00000398782	SLC52A2	Q9HAB3	445 aa		32.82	■■■□□ 2.84
RRBP1-205	ENST00000398782	MRC1	P22897	1456 aa		32.81	■■■□□ 2.84
RRBP1-205	ENST00000398782	SMIM5	Q71RC9	77 aa		32.81	■■■□□ 2.84
RRBP1-205	ENST00000398782	LGR6	Q9HBX8	967 aa		32.81	■■■□□ 2.84
RRBP1-205	ENST00000398782	COL5A3	P25940	1745 aa	Predicted RBP	32.8	■■■□□ 2.84
RRBP1-205	ENST00000398782	U2SURP	O15042	1029 aa	Known RBP	32.8	■■■□□ 2.84
RRBP1-205	ENST00000398782	RNMT	O43148	476 aa	Known RBP	32.8	■■■□□ 2.84
RRBP1-205	ENST00000398782	ADAMTS7	Q9UKP4	1686 aa		32.8	■■■□□ 2.84
RRBP1-205	ENST00000398782	RTCB	Q9Y3I0	505 aa	Known RBP	32.79	■■■□□ 2.84
RRBP1-205	ENST00000398782	PTCD1	O75127	700 aa	Known RBP	32.78	■■■□□ 2.84
RRBP1-205	ENST00000398782	ADRA2B	P18089	450 aa		32.78	■■■□□ 2.84
RRBP1-205	ENST00000398782	CD2AP	Q9Y5K6	639 aa		32.78	■■■□□ 2.84
RRBP1-205	ENST00000398782	CIC	Q96RK0	1608 aa	Predicted RBP	32.77	■■■□□ 2.84
RRBP1-205	ENST00000398782	GOLGB1	Q14789	3259 aa	Known RBP	32.77	■■■□□ 2.84
RRBP1-205	ENST00000398782	PPP2R1A	P30153	589 aa		32.77	■■■□□ 2.84
RRBP1-205	ENST00000398782	NLGN2	Q8NFZ4	835 aa		32.77	■■■□□ 2.84
RRBP1-205	ENST00000398782	TRAPPC3L	Q5T215	181 aa		32.76	■■■□□ 2.83
RRBP1-205	ENST00000398782	RPS6KA4	O75676	772 aa		32.75	■■■□□ 2.83
RRBP1-205	ENST00000398782	GPR162	Q16538	588 aa		32.74	■■■□□ 2.83
RRBP1-205	ENST00000398782	GAS2L2	Q8NHY3	880 aa		32.74	■■■□□ 2.83
RRBP1-205	ENST00000398782	NUDC	Q9Y266	331 aa		32.73	■■■□□ 2.83
RRBP1-205	ENST00000398782	ARHGEF1	Q92888	912 aa	Known RBP	32.7	■■■□□ 2.83
RRBP1-205	ENST00000398782	TJP1	Q07157	1748 aa		32.69	■■■□□ 2.82
RRBP1-205	ENST00000398782	CRKL	P46109	303 aa	Known RBP	32.69	■■■□□ 2.82
RRBP1-205	ENST00000398782	RSPH6A	Q9H0K4	717 aa		32.69	■■■□□ 2.82
RRBP1-205	ENST00000398782	GNAT3	A8MTJ3	354 aa		32.68	■■■□□ 2.82
RRBP1-205	ENST00000398782	NLGN1	Q8N2Q7	840 aa		32.68	■■■□□ 2.82
RRBP1-205	ENST00000398782	VIRMA	Q69YN4	1812 aa	Known RBP	32.67	■■■□□ 2.82
RRBP1-205	ENST00000398782	MYH14	Q7Z406	1995 aa	Known RBP	32.67	■■■□□ 2.82
RRBP1-205	ENST00000398782	KCP	Q6ZWJ8	1503 aa		32.66	■■■□□ 2.82
RRBP1-205	ENST00000398782	PRKAR2B	P31323	418 aa		32.65	■■■□□ 2.82
RRBP1-205	ENST00000398782	RFC4	P35249	363 aa		32.65	■■■□□ 2.82
RRBP1-205	ENST00000398782	SLC39A6	Q13433	755 aa		32.65	■■■□□ 2.82
RRBP1-205	ENST00000398782	VSIG10	Q8N0Z9	540 aa		32.65	■■■□□ 2.82
RRBP1-205	ENST00000398782	IL17RE	Q8NFR9	667 aa		32.64	■■■□□ 2.82
RRBP1-205	ENST00000398782	MMP10	P09238	476 aa		32.63	■■■□□ 2.81
RRBP1-205	ENST00000398782	INTS5	Q6P9B9	1019 aa	Known RBP	32.63	■■■□□ 2.81
RRBP1-205	ENST00000398782	PHACTR3	Q96KR7	559 aa		32.63	■■■□□ 2.81
RRBP1-205	ENST00000398782	CHD4	Q14839	1912 aa		32.62	■■■□□ 2.81
RRBP1-205	ENST00000398782	FCHSD2	O94868	740 aa		32.62	■■■□□ 2.81
RRBP1-205	ENST00000398782	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.62	■■■□□ 2.81
RRBP1-205	ENST00000398782	GYS1	P13807	737 aa		32.62	■■■□□ 2.81
RRBP1-205	ENST00000398782	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.62	■■■□□ 2.81
RRBP1-205	ENST00000398782	DNAJC10	Q8IXB1	793 aa		32.62	■■■□□ 2.81
RRBP1-205	ENST00000398782	GRIN3B	O60391	1043 aa		32.61	■■■□□ 2.81
RRBP1-205	ENST00000398782	PELP1	Q8IZL8	1130 aa	Known RBP	32.61	■■■□□ 2.81
RRBP1-205	ENST00000398782	CEMIP	Q8WUJ3	1361 aa		32.6	■■■□□ 2.81
RRBP1-205	ENST00000398782	TEF	Q10587	303 aa		32.6	■■■□□ 2.81
RRBP1-205	ENST00000398782	CCDC87	Q9NVE4	849 aa		32.6	■■■□□ 2.81
RRBP1-205	ENST00000398782	CYP19A1	P11511	503 aa	Predicted RBP	32.59	■■■□□ 2.81
RRBP1-205	ENST00000398782	YBX3	P16989	372 aa	Known RBP eCLIP	32.59	■■■□□ 2.81
RRBP1-205	ENST00000398782	C4A	P0C0L4	1744 aa		32.59	■■■□□ 2.81
RRBP1-205	ENST00000398782	UBR2	Q8IWV8	1755 aa		32.58	■■■□□ 2.81
RRBP1-205	ENST00000398782	TTC5	Q8N0Z6	440 aa		32.57	■■■□□ 2.8
RRBP1-205	ENST00000398782	USP42	Q9H9J4	1324 aa	Known RBP	32.56	■■■□□ 2.8
RRBP1-205	ENST00000398782	SIPA1L3	O60292	1781 aa	Predicted RBP	32.55	■■■□□ 2.8
RRBP1-205	ENST00000398782	SOS1	Q07889	1333 aa	Predicted RBP	32.54	■■■□□ 2.8
RRBP1-205	ENST00000398782	ZNF790	Q6PG37	636 aa		32.54	■■■□□ 2.8
RRBP1-205	ENST00000398782	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.53	■■■□□ 2.8
RRBP1-205	ENST00000398782	SRP68	Q9UHB9	627 aa	Known RBP	32.51	■■■□□ 2.79
RRBP1-205	ENST00000398782	PARP3	Q9Y6F1	533 aa		32.51	■■■□□ 2.79
RRBP1-205	ENST00000398782	KIF13B	Q9NQT8	1826 aa		32.51	■■■□□ 2.79
RRBP1-205	ENST00000398782	C10orf71	Q711Q0	1435 aa		32.51	■■■□□ 2.79
RRBP1-205	ENST00000398782	ZNF496	Q96IT1	587 aa	Predicted RBP	32.5	■■■□□ 2.79
RRBP1-205	ENST00000398782	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.5	■■■□□ 2.79
RRBP1-205	ENST00000398782	HEG1	Q9ULI3	1381 aa		32.49	■■■□□ 2.79
RRBP1-205	ENST00000398782	HTATSF1	O43719	755 aa	Known RBP	32.49	■■■□□ 2.79
RRBP1-205	ENST00000398782	STARD3NL	O95772	234 aa		32.49	■■■□□ 2.79
RRBP1-205	ENST00000398782	TGFB2	P61812	414 aa		32.49	■■■□□ 2.79
RRBP1-205	ENST00000398782	FKBP8	Q14318	412 aa		32.49	■■■□□ 2.79
RRBP1-205	ENST00000398782	ZBTB1	Q9Y2K1	713 aa		32.49	■■■□□ 2.79
RRBP1-205	ENST00000398782	ZPR1	O75312	459 aa		32.47	■■■□□ 2.79
RRBP1-205	ENST00000398782	RTF1	Q92541	710 aa	Known RBP	32.47	■■■□□ 2.79
RRBP1-205	ENST00000398782	COL15A1	P39059	1388 aa		32.46	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms