RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 AMOTL2Q9Y2J4 779 aa18.06■□□□□ 0.48
CYLD-202ENST00000398568 KCNA6P17658 529 aa18.06■□□□□ 0.48
CYLD-202ENST00000398568 NEXMIFQ5QGS0 1516 aa18.06■□□□□ 0.48
CYLD-202ENST00000398568 GSPT1P15170 499 aaKnown RBP18.06■□□□□ 0.48
CYLD-202ENST00000398568 GADD45BO75293 160 aaPredicted RBP18.05■□□□□ 0.48
CYLD-202ENST00000398568 NPHP4O75161 1426 aaPredicted RBP18.05■□□□□ 0.48
CYLD-202ENST00000398568 MCM2P49736 904 aa18.05■□□□□ 0.48
CYLD-202ENST00000398568 NEK4P51957 841 aa18.05■□□□□ 0.48
CYLD-202ENST00000398568 USP48Q86UV5 1035 aa18.05■□□□□ 0.48
CYLD-202ENST00000398568 ABCC11Q96J66 1382 aa18.05■□□□□ 0.48
CYLD-202ENST00000398568 TMX3Q96JJ7 454 aa18.05■□□□□ 0.48
CYLD-202ENST00000398568 IFT57Q9NWB7 429 aa18.05■□□□□ 0.48
CYLD-202ENST00000398568 AEBP1Q8IUX7 1158 aa18.04■□□□□ 0.48
CYLD-202ENST00000398568 TRERF1Q96PN7 1200 aa18.04■□□□□ 0.48
CYLD-202ENST00000398568 PPIP5K1Q6PFW1 1433 aa18.04■□□□□ 0.48
CYLD-202ENST00000398568 TTC22Q5TAA0 569 aa18.04■□□□□ 0.48
CYLD-202ENST00000398568 C14orf93Q9H972 538 aaKnown RBP18.04■□□□□ 0.48
CYLD-202ENST00000398568 U2SURPO15042 1029 aaKnown RBP18.03■□□□□ 0.48
CYLD-202ENST00000398568 KCNF1Q9H3M0 494 aa18.03■□□□□ 0.48
CYLD-202ENST00000398568 PAXBP1Q9Y5B6 917 aa18.03■□□□□ 0.48
CYLD-202ENST00000398568 KDM5AP29375 1690 aaKnown RBP18.03■□□□□ 0.48
CYLD-202ENST00000398568 TNNT1P13805 278 aa18.03■□□□□ 0.48
CYLD-202ENST00000398568 MX1P20591 662 aa18.03■□□□□ 0.48
CYLD-202ENST00000398568 FAM193AP78312 1265 aa18.03■□□□□ 0.48
CYLD-202ENST00000398568 C16orf45Q96MC5 204 aaPredicted RBP18.03■□□□□ 0.48
CYLD-202ENST00000398568 CREBRFQ8IUR6 639 aa18.03■□□□□ 0.48
CYLD-202ENST00000398568 PLEKHM2Q8IWE5 1019 aa18.03■□□□□ 0.48
CYLD-202ENST00000398568 ZNF397Q8NF99 534 aaPredicted RBP18.02■□□□□ 0.48
CYLD-202ENST00000398568 TULP2O00295 520 aa18.02■□□□□ 0.47
CYLD-202ENST00000398568 ZBTB7BO15156 539 aaPredicted RBP18.02■□□□□ 0.47
CYLD-202ENST00000398568 ALDH1L2Q3SY69 923 aa18.02■□□□□ 0.47
CYLD-202ENST00000398568 PRAM1Q96QH2 718 aa18.01■□□□□ 0.47
CYLD-202ENST00000398568 MINK1Q8N4C8 1332 aaPredicted RBP18.01■□□□□ 0.47
CYLD-202ENST00000398568 CAPN2P17655 700 aa18.01■□□□□ 0.47
CYLD-202ENST00000398568 PROSER2Q86WR7 435 aaPredicted RBP18.01■□□□□ 0.47
CYLD-202ENST00000398568 CERS3Q8IU89 383 aa18.01■□□□□ 0.47
CYLD-202ENST00000398568 DRC7Q8IY82 874 aa18.01■□□□□ 0.47
CYLD-202ENST00000398568 MYOM1P52179 1685 aa18.01■□□□□ 0.47
CYLD-202ENST00000398568 IQGAP1P46940 1657 aa18.01■□□□□ 0.47
CYLD-202ENST00000398568 SMARCA5O60264 1052 aaPredicted RBP18■□□□□ 0.47
CYLD-202ENST00000398568 NOL8Q76FK4 1167 aaKnown RBP18■□□□□ 0.47
CYLD-202ENST00000398568 WDR33Q9C0J8 1336 aaKnown RBP18■□□□□ 0.47
CYLD-202ENST00000398568 PLEKHG1Q9ULL1 1385 aa18■□□□□ 0.47
CYLD-202ENST00000398568 ZFP91Q96JP5 570 aaPredicted RBP17.99■□□□□ 0.47
CYLD-202ENST00000398568 NSD3Q9BZ95 1437 aa17.99■□□□□ 0.47
CYLD-202ENST00000398568 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
CYLD-202ENST00000398568 NAA30Q147X3 362 aaPredicted RBP17.99■□□□□ 0.47
CYLD-202ENST00000398568 ZNF592Q92610 1267 aa17.99■□□□□ 0.47
CYLD-202ENST00000398568 ARHGAP23Q9P227 1491 aa17.99■□□□□ 0.47
CYLD-202ENST00000398568 TEX2Q8IWB9 1127 aa17.98■□□□□ 0.47
CYLD-202ENST00000398568 ADAMTS13Q76LX8 1427 aa17.98■□□□□ 0.47
CYLD-202ENST00000398568 ERC2O15083 957 aa17.98■□□□□ 0.47
CYLD-202ENST00000398568 PTGS1P23219 599 aa17.98■□□□□ 0.47
CYLD-202ENST00000398568 TPD52L1Q16890 204 aaPredicted RBP17.98■□□□□ 0.47
CYLD-202ENST00000398568 TBX22Q9Y458 520 aa17.98■□□□□ 0.47
CYLD-202ENST00000398568 SLIT1O75093 1534 aa17.98■□□□□ 0.47
CYLD-202ENST00000398568 IL16Q14005 1332 aa17.97■□□□□ 0.47
CYLD-202ENST00000398568 MCCP23508 829 aa17.97■□□□□ 0.47
CYLD-202ENST00000398568 NOL10Q9BSC4 688 aaKnown RBP17.97■□□□□ 0.47
CYLD-202ENST00000398568 INTS4Q96HW7 963 aaKnown RBP17.97■□□□□ 0.47
CYLD-202ENST00000398568 SHPRHQ149N8 1683 aa17.96■□□□□ 0.47
CYLD-202ENST00000398568 SDSP20132 328 aa17.95■□□□□ 0.46
CYLD-202ENST00000398568 PPLO60437 1756 aa17.95■□□□□ 0.46
CYLD-202ENST00000398568 UBE2HP62256 183 aa17.95■□□□□ 0.46
CYLD-202ENST00000398568 GIMAP6Q6P9H5 292 aa17.95■□□□□ 0.46
CYLD-202ENST00000398568 SIRT2Q8IXJ6 389 aa17.95■□□□□ 0.46
CYLD-202ENST00000398568 ZNF142P52746 1687 aaPredicted RBP17.95■□□□□ 0.46
CYLD-202ENST00000398568 CUL4AQ13619 759 aa17.95■□□□□ 0.46
CYLD-202ENST00000398568 HNRNPH2P55795 449 aaKnown RBP17.94■□□□□ 0.46
CYLD-202ENST00000398568 CCDC186Q7Z3E2 898 aa17.94■□□□□ 0.46
CYLD-202ENST00000398568 RGS22Q8NE09 1264 aa17.94■□□□□ 0.46
CYLD-202ENST00000398568 FEZ2Q9UHY8 353 aaPredicted RBP17.94■□□□□ 0.46
CYLD-202ENST00000398568 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.94■□□□□ 0.46
CYLD-202ENST00000398568 C16orf71Q8IYS4 520 aaPredicted RBP17.94■□□□□ 0.46
CYLD-202ENST00000398568 TRIM35Q9UPQ4 493 aa17.94■□□□□ 0.46
CYLD-202ENST00000398568 KMT5BQ4FZB7 885 aa17.93■□□□□ 0.46
CYLD-202ENST00000398568 PTPRUQ92729 1446 aa17.93■□□□□ 0.46
CYLD-202ENST00000398568 ALKQ9UM73 1620 aa17.93■□□□□ 0.46
CYLD-202ENST00000398568 CCDC192P0DO97 292 aa17.93■□□□□ 0.46
CYLD-202ENST00000398568 ZNF428Q96B54 188 aa17.93■□□□□ 0.46
CYLD-202ENST00000398568 STRCQ7RTU9 1775 aa17.93■□□□□ 0.46
CYLD-202ENST00000398568 CEP135Q66GS9 1140 aa17.93■□□□□ 0.46
CYLD-202ENST00000398568 EFCC1Q9HA90 598 aa17.93■□□□□ 0.46
CYLD-202ENST00000398568 NEURL4Q96JN8 1562 aa17.93■□□□□ 0.46
CYLD-202ENST00000398568 HTATSF1O43719 755 aaKnown RBP17.92■□□□□ 0.46
CYLD-202ENST00000398568 CNPY2Q9Y2B0 182 aa17.92■□□□□ 0.46
CYLD-202ENST00000398568 TEX35Q5T0J7 233 aa17.92■□□□□ 0.46
CYLD-202ENST00000398568 RTF1Q92541 710 aaKnown RBP17.92■□□□□ 0.46
CYLD-202ENST00000398568 BMS1Q14692 1282 aaKnown RBP17.92■□□□□ 0.46
CYLD-202ENST00000398568 ROBO2Q9HCK4 1378 aa17.91■□□□□ 0.46
CYLD-202ENST00000398568 AP5Z1O43299 807 aa17.91■□□□□ 0.46
CYLD-202ENST00000398568 TMEM87AQ8NBN3 555 aa17.91■□□□□ 0.46
CYLD-202ENST00000398568 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
CYLD-202ENST00000398568 APBB1O00213 710 aa17.91■□□□□ 0.46
CYLD-202ENST00000398568 ARHGAP45Q92619 1136 aa17.91■□□□□ 0.46
CYLD-202ENST00000398568 DCTPP1Q9H773 170 aa17.91■□□□□ 0.46
CYLD-202ENST00000398568 CYP2C19P33261 490 aa17.9■□□□□ 0.46
CYLD-202ENST00000398568 YTHDC2Q9H6S0 1430 aaKnown RBP17.9■□□□□ 0.46
CYLD-202ENST00000398568 MYOM2P54296 1465 aa17.9■□□□□ 0.46
CYLD-202ENST00000398568 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms