RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 RUFY2Q8WXA3 655 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 MYD88Q99836 296 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 PI4KAP2A4QPH2 592 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 MYL6BP14649 208 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 VSIG10Q8N0Z9 540 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 PI4KAP1Q8N8J0 262 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 GPATCH3Q96I76 525 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 CLASRPQ8N2M8 674 aaKnown RBP5.94□□□□□ -1.46
SMAD4-202ENST00000398417 IL17REQ8NFR9 667 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 IQSEC2Q5JU85 1478 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 RTL1A6NKG5 1358 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 TRPM1Q7Z4N2 1603 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 MADDQ8WXG6 1647 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 FERMT3Q86UX7 667 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 CHPF2Q9P2E5 772 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 PIP4K2AP48426 406 aaPredicted RBP5.94□□□□□ -1.46
SMAD4-202ENST00000398417 KIF2CQ99661 725 aa5.94□□□□□ -1.46
SMAD4-202ENST00000398417 BRPF1P55201 1214 aaPredicted RBP5.93□□□□□ -1.46
SMAD4-202ENST00000398417 NBPF6Q5VWK0 638 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 PROSER2Q86WR7 435 aaPredicted RBP5.93□□□□□ -1.46
SMAD4-202ENST00000398417 DRC7Q8IY82 874 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 NECAB1Q8N987 351 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 NBPF4Q96M43 638 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 CLTCL1P53675 1640 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 CLGNO14967 610 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 SYNMO15061 1565 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 HSP90AA2PQ14568 343 aaPredicted RBP5.93□□□□□ -1.46
SMAD4-202ENST00000398417 EDC4Q6P2E9 1401 aaKnown RBP5.93□□□□□ -1.46
SMAD4-202ENST00000398417 LMBRD1Q9NUN5 540 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 ROBO2Q9HCK4 1378 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 PLCD3Q8N3E9 789 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 TRIM63Q969Q1 353 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 NEUROD6Q96NK8 337 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 TULP4Q9NRJ4 1543 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 SLC39A6Q13433 755 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 UNC13BO14795 1591 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 RAPGEF4Q8WZA2 1011 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 CCDC39Q9UFE4 941 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 MAP3K2Q9Y2U5 619 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 PIK3R4Q99570 1358 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 LRRIQ1Q96JM4 1722 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 PRIM1P49642 420 aaKnown RBP5.93□□□□□ -1.46
SMAD4-202ENST00000398417 CWF19L2Q2TBE0 894 aaKnown RBP5.93□□□□□ -1.46
SMAD4-202ENST00000398417 UNC5CLQ8IV45 518 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 FBXW7Q969H0 707 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 TCEANC2Q96MN5 208 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 FAM13BQ9NYF5 915 aa5.93□□□□□ -1.46
SMAD4-202ENST00000398417 NSFL1CQ9UNZ2 370 aaKnown RBP5.93□□□□□ -1.46
SMAD4-202ENST00000398417 BCL11BQ9C0K0 894 aaPredicted RBP5.93□□□□□ -1.46
SMAD4-202ENST00000398417 NPHP1O15259 732 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 CLCN1P35523 988 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 BOLA2Q9H3K6 86 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 DDX58O95786 925 aaKnown RBP5.92□□□□□ -1.46
SMAD4-202ENST00000398417 ZKSCAN1P17029 563 aaPredicted RBP5.92□□□□□ -1.46
SMAD4-202ENST00000398417 KIF1BPQ96EK5 621 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 ZNF830Q96NB3 372 aaPredicted RBP5.92□□□□□ -1.46
SMAD4-202ENST00000398417 SNX14Q9Y5W7 946 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 PREX2Q70Z35 1606 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 PPFIA3O75145 1194 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 TTC5Q8N0Z6 440 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 ISY1Q9ULR0 285 aaKnown RBP5.92□□□□□ -1.46
SMAD4-202ENST00000398417 PNPLA6Q8IY17 1366 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 FSD2A1L4K1 749 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 PRAMEF22A3QJZ6 481 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 KIAA2012Q0VF49 1180 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 CNPY2Q9Y2B0 182 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 CYP46A1Q9Y6A2 500 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 TTC21AQ8NDW8 1320 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 FAM135BQ49AJ0 1406 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 MBD3O95983 291 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 NBPF7P0C2Y1 421 aaPredicted RBP5.92□□□□□ -1.46
SMAD4-202ENST00000398417 MCM2P49736 904 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 GOLGA6L1Q8N7Z2 621 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 PLXNC1O60486 1568 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 AATKQ6ZMQ8 1374 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 USP48Q86UV5 1035 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 ANKRD24Q8TF21 1146 aa5.92□□□□□ -1.46
SMAD4-202ENST00000398417 WDR33Q9C0J8 1336 aaKnown RBP5.92□□□□□ -1.46
SMAD4-202ENST00000398417 GADD45BO75293 160 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-202ENST00000398417 CASTP20810 708 aaKnown RBP5.91□□□□□ -1.46
SMAD4-202ENST00000398417 GJB2P29033 226 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 ZSCAN30Q86W11 494 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 RAB11FIP3O75154 756 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 TMEM2Q9UHN6 1383 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 A0A0U1RQG5 324 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-202ENST00000398417 USP25Q9UHP3 1055 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 TBX22Q9Y458 520 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 EIF4A1P60842 406 aaKnown RBP5.91□□□□□ -1.46
SMAD4-202ENST00000398417 CHMP4AQ9BY43 222 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 ABCC3O15438 1527 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 FLT4P35916 1363 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 NEXNQ0ZGT2 675 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 KLHDC4Q8TBB5 520 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 KCNA4P22459 653 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 CEBPZQ03701 1054 aaKnown RBP5.91□□□□□ -1.46
SMAD4-202ENST00000398417 NMIQ13287 307 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-202ENST00000398417 LRSAM1Q6UWE0 723 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-202ENST00000398417 HDAC5Q9UQL6 1122 aa5.91□□□□□ -1.46
SMAD4-202ENST00000398417 HTATSF1O43719 755 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms