RNA–Protein interactions for RNA: ENST00000398409.1

CST3-202, Transcript of cystatin C, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CST3, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST3-202ENST00000398409 COL23A1Q86Y22 540 aaPredicted RBP24.06■■□□□ 1.44
CST3-202ENST00000398409 GAS2L2Q8NHY3 880 aa24.06■■□□□ 1.44
CST3-202ENST00000398409 NFATC2IPQ8NCF5 419 aa24.05■■□□□ 1.44
CST3-202ENST00000398409 SYT17Q9BSW7 474 aa24.05■■□□□ 1.44
CST3-202ENST00000398409 TAF1LQ8IZX4 1826 aa24.05■■□□□ 1.44
CST3-202ENST00000398409 KDM6AO15550 1401 aaPredicted RBP24.04■■□□□ 1.44
CST3-202ENST00000398409 PPP2R1AP30153 589 aa24.04■■□□□ 1.44
CST3-202ENST00000398409 RBM42Q9BTD8 480 aaKnown RBP24.04■■□□□ 1.44
CST3-202ENST00000398409 FHDC1Q9C0D6 1143 aaPredicted RBP24.04■■□□□ 1.44
CST3-202ENST00000398409 RC3H1Q5TC82 1133 aaKnown RBP24.03■■□□□ 1.44
CST3-202ENST00000398409 C4BP0C0L5 1744 aa24.02■■□□□ 1.44
CST3-202ENST00000398409 SLC52A2Q9HAB3 445 aa24.02■■□□□ 1.44
CST3-202ENST00000398409 ZNF831Q5JPB2 1677 aa24.02■■□□□ 1.44
CST3-202ENST00000398409 ADRA2BP18089 450 aa24.01■■□□□ 1.43
CST3-202ENST00000398409 MTHFSDQ2M296 383 aaKnown RBP24.01■■□□□ 1.43
CST3-202ENST00000398409 COL3A1P02461 1466 aaPredicted RBP24■■□□□ 1.43
CST3-202ENST00000398409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24■■□□□ 1.43
CST3-202ENST00000398409 RNMTO43148 476 aaKnown RBP24■■□□□ 1.43
CST3-202ENST00000398409 LINC00116Q8NCU8 138 aa24■■□□□ 1.43
CST3-202ENST00000398409 RTCBQ9Y3I0 505 aaKnown RBP24■■□□□ 1.43
CST3-202ENST00000398409 GNPATO15228 680 aa23.99■■□□□ 1.43
CST3-202ENST00000398409 FCHSD2O94868 740 aa23.99■■□□□ 1.43
CST3-202ENST00000398409 GNAT3A8MTJ3 354 aa23.98■■□□□ 1.43
CST3-202ENST00000398409 NEFMP07197 916 aa23.98■■□□□ 1.43
CST3-202ENST00000398409 ITPK1Q13572 414 aa23.98■■□□□ 1.43
CST3-202ENST00000398409 CNTNAP4Q9C0A0 1308 aa23.98■■□□□ 1.43
CST3-202ENST00000398409 COL24A1Q17RW2 1714 aa23.98■■□□□ 1.43
CST3-202ENST00000398409 TUBGCP6Q96RT7 1819 aa23.98■■□□□ 1.43
CST3-202ENST00000398409 ZEB1P37275 1124 aaPredicted RBP23.97■■□□□ 1.43
CST3-202ENST00000398409 TRAPPC3LQ5T215 181 aa23.97■■□□□ 1.43
CST3-202ENST00000398409 PNNQ9H307 717 aaKnown RBP23.97■■□□□ 1.43
CST3-202ENST00000398409 SCN11AQ9UI33 1791 aa23.97■■□□□ 1.43
CST3-202ENST00000398409 U2AF1L5P0DN76 240 aaPredicted RBP23.96■■□□□ 1.43
CST3-202ENST00000398409 U2AF1Q01081 240 aaKnown RBP eCLIP23.96■■□□□ 1.43
CST3-202ENST00000398409 PTCD1O75127 700 aaKnown RBP23.95■■□□□ 1.42
CST3-202ENST00000398409 PHF14O94880 888 aa23.95■■□□□ 1.42
CST3-202ENST00000398409 TEFQ10587 303 aa23.95■■□□□ 1.42
CST3-202ENST00000398409 RALBP1Q15311 655 aa23.95■■□□□ 1.42
CST3-202ENST00000398409 LGR6Q9HBX8 967 aa23.95■■□□□ 1.42
CST3-202ENST00000398409 RPS6KA4O75676 772 aa23.93■■□□□ 1.42
CST3-202ENST00000398409 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
CST3-202ENST00000398409 VSIG10Q8N0Z9 540 aa23.93■■□□□ 1.42
CST3-202ENST00000398409 CD2APQ9Y5K6 639 aa23.93■■□□□ 1.42
CST3-202ENST00000398409 UBR3Q6ZT12 1888 aa23.93■■□□□ 1.42
CST3-202ENST00000398409 TTC5Q8N0Z6 440 aa23.92■■□□□ 1.42
CST3-202ENST00000398409 NLGN1Q8N2Q7 840 aa23.92■■□□□ 1.42
CST3-202ENST00000398409 RSPH6AQ9H0K4 717 aa23.92■■□□□ 1.42
CST3-202ENST00000398409 MRC1P22897 1456 aa23.92■■□□□ 1.42
CST3-202ENST00000398409 RFC4P35249 363 aa23.91■■□□□ 1.42
CST3-202ENST00000398409 KLHL34Q8N239 644 aa23.91■■□□□ 1.42
CST3-202ENST00000398409 RTF1Q92541 710 aaKnown RBP23.91■■□□□ 1.42
CST3-202ENST00000398409 SLC4A9Q96Q91 983 aa23.91■■□□□ 1.42
CST3-202ENST00000398409 HTATSF1O43719 755 aaKnown RBP23.89■■□□□ 1.41
CST3-202ENST00000398409 MSL1Q68DK7 614 aa23.89■■□□□ 1.41
CST3-202ENST00000398409 TEX13AQ9BXU3 409 aaPredicted RBP23.89■■□□□ 1.41
CST3-202ENST00000398409 ADAMTS7Q9UKP4 1686 aa23.88■■□□□ 1.41
CST3-202ENST00000398409 CRKLP46109 303 aaKnown RBP23.87■■□□□ 1.41
CST3-202ENST00000398409 GPR162Q16538 588 aa23.87■■□□□ 1.41
CST3-202ENST00000398409 ARHGEF1Q92888 912 aaKnown RBP23.86■■□□□ 1.41
CST3-202ENST00000398409 STARD3NLO95772 234 aa23.85■■□□□ 1.41
CST3-202ENST00000398409 YY1P25490 414 aa23.85■■□□□ 1.41
CST3-202ENST00000398409 IL17REQ8NFR9 667 aa23.85■■□□□ 1.41
CST3-202ENST00000398409 PHACTR3Q96KR7 559 aa23.85■■□□□ 1.41
CST3-202ENST00000398409 CICQ96RK0 1608 aaPredicted RBP23.84■■□□□ 1.41
CST3-202ENST00000398409 GRIN3BO60391 1043 aa23.84■■□□□ 1.41
CST3-202ENST00000398409 DDX10Q13206 875 aaKnown RBP23.84■■□□□ 1.41
CST3-202ENST00000398409 AMIGO3Q86WK7 504 aa23.84■■□□□ 1.41
CST3-202ENST00000398409 CCDC87Q9NVE4 849 aa23.84■■□□□ 1.41
CST3-202ENST00000398409 COL5A3P25940 1745 aaPredicted RBP23.84■■□□□ 1.41
CST3-202ENST00000398409 CEMIPQ8WUJ3 1361 aa23.83■■□□□ 1.41
CST3-202ENST00000398409 SLC39A6Q13433 755 aa23.83■■□□□ 1.41
CST3-202ENST00000398409 ZNF790Q6PG37 636 aa23.83■■□□□ 1.41
CST3-202ENST00000398409 VIRMAQ69YN4 1812 aaKnown RBP23.82■■□□□ 1.4
CST3-202ENST00000398409 DNAJC10Q8IXB1 793 aa23.81■■□□□ 1.4
CST3-202ENST00000398409 FMNL2Q96PY5 1086 aa23.81■■□□□ 1.4
CST3-202ENST00000398409 BTBD11A6QL63 1104 aa23.8■■□□□ 1.4
CST3-202ENST00000398409 ZPR1O75312 459 aa23.8■■□□□ 1.4
CST3-202ENST00000398409 CYP19A1P11511 503 aaPredicted RBP23.8■■□□□ 1.4
CST3-202ENST00000398409 MMP10P09238 476 aa23.79■■□□□ 1.4
CST3-202ENST00000398409 INTS5Q6P9B9 1019 aaKnown RBP23.79■■□□□ 1.4
CST3-202ENST00000398409 NPM2Q86SE8 214 aaKnown RBP23.79■■□□□ 1.4
CST3-202ENST00000398409 PARP3Q9Y6F1 533 aa23.79■■□□□ 1.4
CST3-202ENST00000398409 GYS1P13807 737 aa23.78■■□□□ 1.4
CST3-202ENST00000398409 MYBBP1AQ9BQG0 1328 aaKnown RBP23.78■■□□□ 1.4
CST3-202ENST00000398409 MAPK8IP3Q9UPT6 1336 aa23.78■■□□□ 1.4
CST3-202ENST00000398409 A0A087WZG4 1122 aa23.77■■□□□ 1.4
CST3-202ENST00000398409 SMIM5Q71RC9 77 aa23.77■■□□□ 1.4
CST3-202ENST00000398409 MYH14Q7Z406 1995 aaKnown RBP23.77■■□□□ 1.4
CST3-202ENST00000398409 KCPQ6ZWJ8 1503 aa23.76■■□□□ 1.39
CST3-202ENST00000398409 NLGN2Q8NFZ4 835 aa23.76■■□□□ 1.39
CST3-202ENST00000398409 PNISRQ8TF01 805 aaKnown RBP23.76■■□□□ 1.39
CST3-202ENST00000398409 USP42Q9H9J4 1324 aaKnown RBP23.76■■□□□ 1.39
CST3-202ENST00000398409 HEG1Q9ULI3 1381 aa23.76■■□□□ 1.39
CST3-202ENST00000398409 TGFB2P61812 414 aa23.75■■□□□ 1.39
CST3-202ENST00000398409 PELP1Q8IZL8 1130 aaKnown RBP23.75■■□□□ 1.39
CST3-202ENST00000398409 ZNF496Q96IT1 587 aaPredicted RBP23.75■■□□□ 1.39
CST3-202ENST00000398409 SOS1Q07889 1333 aaPredicted RBP23.75■■□□□ 1.39
CST3-202ENST00000398409 TJP1Q07157 1748 aa23.74■■□□□ 1.39
CST3-202ENST00000398409 TAF7Q15545 349 aaPredicted RBP23.73■■□□□ 1.39
CST3-202ENST00000398409 NARFQ9UHQ1 456 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms