RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 HMGB2P26583 209 aaKnown RBP25.64■■□□□ 1.7
MCF2L-207ENST00000397024 FLAD1Q8NFF5 587 aa25.64■■□□□ 1.7
MCF2L-207ENST00000397024 KDM6AO15550 1401 aaPredicted RBP25.63■■□□□ 1.69
MCF2L-207ENST00000397024 HSP90AB1P08238 724 aaKnown RBP25.63■■□□□ 1.69
MCF2L-207ENST00000397024 ATP6V1AP38606 617 aa25.63■■□□□ 1.69
MCF2L-207ENST00000397024 NLGN2Q8NFZ4 835 aa25.63■■□□□ 1.69
MCF2L-207ENST00000397024 SLC4A9Q96Q91 983 aa25.63■■□□□ 1.69
MCF2L-207ENST00000397024 KDRP35968 1356 aa25.63■■□□□ 1.69
MCF2L-207ENST00000397024 PHF14O94880 888 aa25.62■■□□□ 1.69
MCF2L-207ENST00000397024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.61■■□□□ 1.69
MCF2L-207ENST00000397024 UBR3Q6ZT12 1888 aa25.61■■□□□ 1.69
MCF2L-207ENST00000397024 CNGB1Q14028 1251 aaPredicted RBP25.6■■□□□ 1.69
MCF2L-207ENST00000397024 CABP4P57796 275 aa25.59■■□□□ 1.69
MCF2L-207ENST00000397024 C1orf141Q5JVX7 400 aa25.58■■□□□ 1.69
MCF2L-207ENST00000397024 HMOX1P09601 288 aa25.57■■□□□ 1.68
MCF2L-207ENST00000397024 NFATC2IPQ8NCF5 419 aa25.57■■□□□ 1.68
MCF2L-207ENST00000397024 RBM42Q9BTD8 480 aaKnown RBP25.57■■□□□ 1.68
MCF2L-207ENST00000397024 GNPATO15228 680 aa25.56■■□□□ 1.68
MCF2L-207ENST00000397024 SSFA2P28290 1259 aa25.56■■□□□ 1.68
MCF2L-207ENST00000397024 GPR162Q16538 588 aa25.56■■□□□ 1.68
MCF2L-207ENST00000397024 NPC1L1Q9UHC9 1359 aa25.55■■□□□ 1.68
MCF2L-207ENST00000397024 DIAPH1O60610 1272 aaKnown RBP25.54■■□□□ 1.68
MCF2L-207ENST00000397024 LGR6Q9HBX8 967 aa25.53■■□□□ 1.68
MCF2L-207ENST00000397024 PELP1Q8IZL8 1130 aaKnown RBP25.52■■□□□ 1.68
MCF2L-207ENST00000397024 PTCD1O75127 700 aaKnown RBP25.51■■□□□ 1.67
MCF2L-207ENST00000397024 AKAP4Q5JQC9 854 aa25.51■■□□□ 1.67
MCF2L-207ENST00000397024 YBX3P16989 372 aaKnown RBP eCLIP25.49■■□□□ 1.67
MCF2L-207ENST00000397024 RC3H1Q5TC82 1133 aaKnown RBP25.49■■□□□ 1.67
MCF2L-207ENST00000397024 CD2APQ9Y5K6 639 aa25.49■■□□□ 1.67
MCF2L-207ENST00000397024 CHD4Q14839 1912 aa25.49■■□□□ 1.67
MCF2L-207ENST00000397024 SCN11AQ9UI33 1791 aa25.49■■□□□ 1.67
MCF2L-207ENST00000397024 ZNF831Q5JPB2 1677 aa25.48■■□□□ 1.67
MCF2L-207ENST00000397024 COL3A1P02461 1466 aaPredicted RBP25.48■■□□□ 1.67
MCF2L-207ENST00000397024 MTHFSDQ2M296 383 aaKnown RBP25.48■■□□□ 1.67
MCF2L-207ENST00000397024 RNMTO43148 476 aaKnown RBP25.47■■□□□ 1.67
MCF2L-207ENST00000397024 RTCBQ9Y3I0 505 aaKnown RBP25.47■■□□□ 1.67
MCF2L-207ENST00000397024 MYH14Q7Z406 1995 aaKnown RBP25.47■■□□□ 1.67
MCF2L-207ENST00000397024 TRAPPC3LQ5T215 181 aa25.46■■□□□ 1.67
MCF2L-207ENST00000397024 ZNF784Q8NCA9 323 aaPredicted RBP25.46■■□□□ 1.67
MCF2L-207ENST00000397024 SLC52A2Q9HAB3 445 aa25.46■■□□□ 1.67
MCF2L-207ENST00000397024 COL5A3P25940 1745 aaPredicted RBP25.46■■□□□ 1.67
MCF2L-207ENST00000397024 CNTNAP4Q9C0A0 1308 aa25.45■■□□□ 1.66
MCF2L-207ENST00000397024 ARHGEF1Q92888 912 aaKnown RBP25.45■■□□□ 1.66
MCF2L-207ENST00000397024 RPS6KA4O75676 772 aa25.44■■□□□ 1.66
MCF2L-207ENST00000397024 U2SURPO15042 1029 aaKnown RBP25.43■■□□□ 1.66
MCF2L-207ENST00000397024 SLC39A6Q13433 755 aa25.42■■□□□ 1.66
MCF2L-207ENST00000397024 MMP10P09238 476 aa25.41■■□□□ 1.66
MCF2L-207ENST00000397024 CRKLP46109 303 aaKnown RBP25.41■■□□□ 1.66
MCF2L-207ENST00000397024 GYS1P13807 737 aa25.39■■□□□ 1.66
MCF2L-207ENST00000397024 ADRA2BP18089 450 aa25.39■■□□□ 1.66
MCF2L-207ENST00000397024 TJP1Q07157 1748 aa25.38■■□□□ 1.65
MCF2L-207ENST00000397024 VIRMAQ69YN4 1812 aaKnown RBP25.38■■□□□ 1.65
MCF2L-207ENST00000397024 GRIN3BO60391 1043 aa25.38■■□□□ 1.65
MCF2L-207ENST00000397024 RFC4P35249 363 aa25.38■■□□□ 1.65
MCF2L-207ENST00000397024 INTS5Q6P9B9 1019 aaKnown RBP25.38■■□□□ 1.65
MCF2L-207ENST00000397024 DNAJC10Q8IXB1 793 aa25.38■■□□□ 1.65
MCF2L-207ENST00000397024 ADAMTS7Q9UKP4 1686 aa25.37■■□□□ 1.65
MCF2L-207ENST00000397024 MRC1P22897 1456 aa25.37■■□□□ 1.65
MCF2L-207ENST00000397024 NLGN1Q8N2Q7 840 aa25.37■■□□□ 1.65
MCF2L-207ENST00000397024 WWC3Q9ULE0 1092 aa25.37■■□□□ 1.65
MCF2L-207ENST00000397024 PPP2R1AP30153 589 aa25.35■■□□□ 1.65
MCF2L-207ENST00000397024 IL17REQ8NFR9 667 aa25.35■■□□□ 1.65
MCF2L-207ENST00000397024 SRP68Q9UHB9 627 aaKnown RBP25.35■■□□□ 1.65
MCF2L-207ENST00000397024 PHACTR3Q96KR7 559 aa25.34■■□□□ 1.65
MCF2L-207ENST00000397024 CICQ96RK0 1608 aaPredicted RBP25.33■■□□□ 1.65
MCF2L-207ENST00000397024 KCPQ6ZWJ8 1503 aa25.32■■□□□ 1.64
MCF2L-207ENST00000397024 C4AP0C0L4 1744 aa25.32■■□□□ 1.64
MCF2L-207ENST00000397024 CYP19A1P11511 503 aaPredicted RBP25.32■■□□□ 1.64
MCF2L-207ENST00000397024 CFAP53Q96M91 514 aa25.32■■□□□ 1.64
MCF2L-207ENST00000397024 GNAT3A8MTJ3 354 aa25.31■■□□□ 1.64
MCF2L-207ENST00000397024 RSPH6AQ9H0K4 717 aa25.31■■□□□ 1.64
MCF2L-207ENST00000397024 CCDC87Q9NVE4 849 aa25.31■■□□□ 1.64
MCF2L-207ENST00000397024 PRKAR2BP31323 418 aa25.3■■□□□ 1.64
MCF2L-207ENST00000397024 FKBP8Q14318 412 aa25.3■■□□□ 1.64
MCF2L-207ENST00000397024 GAS2L2Q8NHY3 880 aa25.3■■□□□ 1.64
MCF2L-207ENST00000397024 USP42Q9H9J4 1324 aaKnown RBP25.29■■□□□ 1.64
MCF2L-207ENST00000397024 A0A0G2JLW4 131 aa25.27■■□□□ 1.64
MCF2L-207ENST00000397024 KIF13BQ9NQT8 1826 aa25.27■■□□□ 1.64
MCF2L-207ENST00000397024 SOS1Q07889 1333 aaPredicted RBP25.27■■□□□ 1.64
MCF2L-207ENST00000397024 PXDNLA1KZ92 1463 aa25.27■■□□□ 1.64
MCF2L-207ENST00000397024 NUDCQ9Y266 331 aa25.26■■□□□ 1.63
MCF2L-207ENST00000397024 PARP3Q9Y6F1 533 aa25.26■■□□□ 1.63
MCF2L-207ENST00000397024 KIAA1551Q9HCM1 1747 aa25.26■■□□□ 1.63
MCF2L-207ENST00000397024 U2AF1L5P0DN76 240 aaPredicted RBP25.25■■□□□ 1.63
MCF2L-207ENST00000397024 TGFB2P61812 414 aa25.25■■□□□ 1.63
MCF2L-207ENST00000397024 U2AF1Q01081 240 aaKnown RBP eCLIP25.25■■□□□ 1.63
MCF2L-207ENST00000397024 DDR1Q08345 913 aa25.25■■□□□ 1.63
MCF2L-207ENST00000397024 TEFQ10587 303 aa25.25■■□□□ 1.63
MCF2L-207ENST00000397024 VSIG10Q8N0Z9 540 aa25.25■■□□□ 1.63
MCF2L-207ENST00000397024 ZNF496Q96IT1 587 aaPredicted RBP25.25■■□□□ 1.63
MCF2L-207ENST00000397024 ZBTB1Q9Y2K1 713 aa25.25■■□□□ 1.63
MCF2L-207ENST00000397024 C10orf71Q711Q0 1435 aa25.25■■□□□ 1.63
MCF2L-207ENST00000397024 N4BP2Q86UW6 1770 aaPredicted RBP25.24■■□□□ 1.63
MCF2L-207ENST00000397024 UBR2Q8IWV8 1755 aa25.24■■□□□ 1.63
MCF2L-207ENST00000397024 ZNF790Q6PG37 636 aa25.24■■□□□ 1.63
MCF2L-207ENST00000397024 TM4SF1P30408 202 aa25.23■■□□□ 1.63
MCF2L-207ENST00000397024 USPL1Q5W0Q7 1092 aa25.23■■□□□ 1.63
MCF2L-207ENST00000397024 CEMIPQ8WUJ3 1361 aa25.22■■□□□ 1.63
MCF2L-207ENST00000397024 DPEP1P16444 411 aa25.22■■□□□ 1.63
MCF2L-207ENST00000397024 TTC5Q8N0Z6 440 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms