RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 SCN11AQ9UI33 1791 aa15.16■□□□□ 0.02
GTF2A2-202ENST00000396060 ABCC4O15439 1325 aa15.16■□□□□ 0.02
GTF2A2-202ENST00000396060 PTPRCP08575 1304 aa15.16■□□□□ 0.02
GTF2A2-202ENST00000396060 VIRMAQ69YN4 1812 aaKnown RBP15.16■□□□□ 0.02
GTF2A2-202ENST00000396060 IL2RBP14784 551 aa15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 LARP1Q6PKG0 1096 aaKnown RBP15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 CENPQQ7L2Z9 268 aaPredicted RBP15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 ZCRB1Q8TBF4 217 aaKnown RBP15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 CHMP4BQ9H444 224 aaKnown RBP15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 KDM6AO15550 1401 aaPredicted RBP15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 MRC1P22897 1456 aa15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 BTBD11A6QL63 1104 aa15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 UBAP1LF5GYI3 381 aa15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 CCDC30Q5VVM6 783 aa15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 SLC52A2Q9HAB3 445 aa15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 BTG4Q9NY30 223 aa15.15■□□□□ 0.02
GTF2A2-202ENST00000396060 TMEM57Q8N5G2 664 aa15.14■□□□□ 0.01
GTF2A2-202ENST00000396060 PCDH11XQ9BZA7 1347 aa15.14■□□□□ 0.01
GTF2A2-202ENST00000396060 PCDH11YQ9BZA8 1340 aa15.14■□□□□ 0.01
GTF2A2-202ENST00000396060 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
GTF2A2-202ENST00000396060 INTS3Q68E01 1043 aaKnown RBP15.12■□□□□ 0.01
GTF2A2-202ENST00000396060 CERKQ8TCT0 537 aa15.12■□□□□ 0.01
GTF2A2-202ENST00000396060 STRN4Q9NRL3 753 aa15.12■□□□□ 0.01
GTF2A2-202ENST00000396060 ZBTB40Q9NUA8 1239 aa15.12■□□□□ 0.01
GTF2A2-202ENST00000396060 ERVV-2B6SEH9 535 aa15.11■□□□□ 0.01
GTF2A2-202ENST00000396060 PIP4K2BP78356 416 aa15.11■□□□□ 0.01
GTF2A2-202ENST00000396060 STK31Q9BXU1 1019 aa15.11■□□□□ 0.01
GTF2A2-202ENST00000396060 DISP2A7MBM2 1401 aa15.11■□□□□ 0.01
GTF2A2-202ENST00000396060 RGS12O14924 1447 aa15.11■□□□□ 0.01
GTF2A2-202ENST00000396060 ZBTB7BO15156 539 aaPredicted RBP15.11■□□□□ 0.01
GTF2A2-202ENST00000396060 TCERG1O14776 1098 aaKnown RBP15.1■□□□□ 0.01
GTF2A2-202ENST00000396060 KCNQ3O43525 872 aa15.1■□□□□ 0.01
GTF2A2-202ENST00000396060 ITPRIPQ8IWB1 547 aa15.1■□□□□ 0.01
GTF2A2-202ENST00000396060 PCDHB15Q9Y5E8 787 aa15.1■□□□□ 0.01
GTF2A2-202ENST00000396060 GIGYF1O75420 1035 aaPredicted RBP15.09■□□□□ 0.01
GTF2A2-202ENST00000396060 CDCA7Q9BWT1 371 aaPredicted RBP15.09■□□□□ 0.01
GTF2A2-202ENST00000396060 JCADQ9P266 1359 aa15.09■□□□□ 0.01
GTF2A2-202ENST00000396060 HDAC1Q13547 482 aaPredicted RBP15.08■□□□□ 0
GTF2A2-202ENST00000396060 ZNF790Q6PG37 636 aa15.08■□□□□ 0
GTF2A2-202ENST00000396060 NFATC2IPQ8NCF5 419 aa15.08■□□□□ 0
GTF2A2-202ENST00000396060 THRAP3Q9Y2W1 955 aaKnown RBP15.08■□□□□ 0
GTF2A2-202ENST00000396060 IGHDP01880 384 aa15.07■□□□□ 0
GTF2A2-202ENST00000396060 HDGFL1Q5TGJ6 251 aa15.07■□□□□ 0
GTF2A2-202ENST00000396060 RWDD1Q9H446 243 aaPredicted RBP15.07■□□□□ 0
GTF2A2-202ENST00000396060 SLIT2O94813 1529 aa15.07■□□□□ 0
GTF2A2-202ENST00000396060 PLCH1Q4KWH8 1693 aa15.07■□□□□ 0
GTF2A2-202ENST00000396060 SHANK3Q9BYB0 1731 aa15.07■□□□□ 0
GTF2A2-202ENST00000396060 NWD2Q9ULI1 1742 aa15.07■□□□□ 0
GTF2A2-202ENST00000396060 G2E3Q7L622 706 aa15.07■□□□□ 0
GTF2A2-202ENST00000396060 NRAPQ86VF7 1730 aa15.06■□□□□ 0
GTF2A2-202ENST00000396060 CABP4P57796 275 aa15.06■□□□□ 0
GTF2A2-202ENST00000396060 FLIIQ13045 1269 aa15.06■□□□□ 0
GTF2A2-202ENST00000396060 SPATA31A1Q5TZJ5 1347 aa15.05■□□□□ -0
GTF2A2-202ENST00000396060 CCT4P50991 539 aaKnown RBP15.05■□□□□ -0
GTF2A2-202ENST00000396060 SPATA31A6Q5VVP1 1343 aa15.04■□□□□ -0
GTF2A2-202ENST00000396060 ADAMTS2O95450 1211 aa15.04■□□□□ -0
GTF2A2-202ENST00000396060 DBF4Q9UBU7 674 aaPredicted RBP15.04■□□□□ -0
GTF2A2-202ENST00000396060 SPATA31A5Q5VU36 1347 aa15.03■□□□□ -0
GTF2A2-202ENST00000396060 SPATA31A7Q8IWB4 1347 aa15.03■□□□□ -0
GTF2A2-202ENST00000396060 TSHZ2Q9NRE2 1034 aa15.03■□□□□ -0
GTF2A2-202ENST00000396060 BARGINQ6ZT62 677 aa15.02■□□□□ -0
GTF2A2-202ENST00000396060 PXDNLA1KZ92 1463 aa15.02■□□□□ -0
GTF2A2-202ENST00000396060 SNRPA1P09661 255 aaKnown RBP15.02□□□□□ -0.01
GTF2A2-202ENST00000396060 ZNF496Q96IT1 587 aaPredicted RBP15.02□□□□□ -0.01
GTF2A2-202ENST00000396060 FMNL2Q96PY5 1086 aa15.02□□□□□ -0.01
GTF2A2-202ENST00000396060 HYPKQ9NX55 129 aa15.02□□□□□ -0.01
GTF2A2-202ENST00000396060 WNK3Q9BYP7 1800 aa15.01□□□□□ -0.01
GTF2A2-202ENST00000396060 LRP6O75581 1613 aa15.01□□□□□ -0.01
GTF2A2-202ENST00000396060 EXOC5O00471 708 aa15.01□□□□□ -0.01
GTF2A2-202ENST00000396060 EIF2S2P20042 333 aaKnown RBP15.01□□□□□ -0.01
GTF2A2-202ENST00000396060 SLC39A6Q13433 755 aa15.01□□□□□ -0.01
GTF2A2-202ENST00000396060 TTC5Q8N0Z6 440 aa15.01□□□□□ -0.01
GTF2A2-202ENST00000396060 FNBP4Q8N3X1 1017 aaPredicted RBP15.01□□□□□ -0.01
GTF2A2-202ENST00000396060 DDX54Q8TDD1 881 aaKnown RBP15.01□□□□□ -0.01
GTF2A2-202ENST00000396060 DDX21Q9NR30 783 aaKnown RBP eCLIP15.01□□□□□ -0.01
GTF2A2-202ENST00000396060 CHPF2Q9P2E5 772 aa15.01□□□□□ -0.01
GTF2A2-202ENST00000396060 NUTM2BA6NNL0 878 aaPredicted RBP15□□□□□ -0.01
GTF2A2-202ENST00000396060 NUTM2EB1AL46 878 aaPredicted RBP15□□□□□ -0.01
GTF2A2-202ENST00000396060 FKBP5Q13451 457 aaPredicted RBP15□□□□□ -0.01
GTF2A2-202ENST00000396060 TNS2Q63HR2 1409 aa15□□□□□ -0.01
GTF2A2-202ENST00000396060 UNC5CLQ8IV45 518 aa15□□□□□ -0.01
GTF2A2-202ENST00000396060 NUTM2AQ8IVF1 878 aaPredicted RBP15□□□□□ -0.01
GTF2A2-202ENST00000396060 SMC5Q8IY18 1101 aa15□□□□□ -0.01
GTF2A2-202ENST00000396060 USP35Q9P2H5 1018 aa15□□□□□ -0.01
GTF2A2-202ENST00000396060 IBTKQ9P2D0 1353 aaPredicted RBP15□□□□□ -0.01
GTF2A2-202ENST00000396060 PDIA6Q15084 440 aa14.99□□□□□ -0.01
GTF2A2-202ENST00000396060 N4BP2Q86UW6 1770 aaPredicted RBP14.99□□□□□ -0.01
GTF2A2-202ENST00000396060 PAPPAQ13219 1627 aa14.99□□□□□ -0.01
GTF2A2-202ENST00000396060 ERBB4Q15303 1308 aa14.99□□□□□ -0.01
GTF2A2-202ENST00000396060 UBR2Q8IWV8 1755 aa14.99□□□□□ -0.01
GTF2A2-202ENST00000396060 VPS72Q15906 364 aa14.98□□□□□ -0.01
GTF2A2-202ENST00000396060 RPAP2Q8IXW5 612 aaPredicted RBP14.98□□□□□ -0.01
GTF2A2-202ENST00000396060 NECTIN2Q92692 538 aa14.98□□□□□ -0.01
GTF2A2-202ENST00000396060 PHAXQ9H814 394 aaKnown RBP14.98□□□□□ -0.01
GTF2A2-202ENST00000396060 F6X3S4 739 aa14.98□□□□□ -0.01
GTF2A2-202ENST00000396060 BCL9LQ86UU0 1499 aa14.97□□□□□ -0.01
GTF2A2-202ENST00000396060 ATP10DQ9P241 1426 aa14.97□□□□□ -0.01
GTF2A2-202ENST00000396060 PRAMEF22A3QJZ6 481 aa14.97□□□□□ -0.01
GTF2A2-202ENST00000396060 GLI3P10071 1580 aa14.97□□□□□ -0.01
GTF2A2-202ENST00000396060 KSR2Q6VAB6 950 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms