RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 CYP27B1O15528 508 aa11.17□□□□□ -0.62
HERC4-203ENST00000395185 POTEHQ6S545 545 aa11.17□□□□□ -0.62
HERC4-203ENST00000395185 MPRIPQ6WCQ1 1025 aa11.17□□□□□ -0.62
HERC4-203ENST00000395185 PHACTR3Q96KR7 559 aa11.17□□□□□ -0.62
HERC4-203ENST00000395185 RGPD1P0DJD0 1748 aa11.16□□□□□ -0.62
HERC4-203ENST00000395185 PHKG2P15735 406 aa11.16□□□□□ -0.62
HERC4-203ENST00000395185 PRKAR2BP31323 418 aa11.16□□□□□ -0.62
HERC4-203ENST00000395185 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.62
HERC4-203ENST00000395185 ZNF530Q6P9A1 599 aaPredicted RBP11.16□□□□□ -0.62
HERC4-203ENST00000395185 AEBP1Q8IUX7 1158 aa11.16□□□□□ -0.62
HERC4-203ENST00000395185 CCDC146Q8IYE0 955 aa11.16□□□□□ -0.62
HERC4-203ENST00000395185 YTHDC1Q96MU7 727 aaKnown RBP11.16□□□□□ -0.62
HERC4-203ENST00000395185 TMOD3Q9NYL9 352 aa11.16□□□□□ -0.62
HERC4-203ENST00000395185 EP400Q96L91 3159 aa11.15□□□□□ -0.62
HERC4-203ENST00000395185 BRWD3Q6RI45 1802 aa11.15□□□□□ -0.62
HERC4-203ENST00000395185 ERVV-2B6SEH9 535 aa11.15□□□□□ -0.62
HERC4-203ENST00000395185 HMOX1P09601 288 aa11.15□□□□□ -0.62
HERC4-203ENST00000395185 TMPOP42166 694 aaKnown RBP11.15□□□□□ -0.62
HERC4-203ENST00000395185 DCAF5Q96JK2 942 aa11.15□□□□□ -0.62
HERC4-203ENST00000395185 PLEKHG2Q9H7P9 1386 aa11.15□□□□□ -0.63
HERC4-203ENST00000395185 MEGF6O75095 1541 aa11.14□□□□□ -0.63
HERC4-203ENST00000395185 NEFMP07197 916 aa11.14□□□□□ -0.63
HERC4-203ENST00000395185 CABP4P57796 275 aa11.14□□□□□ -0.63
HERC4-203ENST00000395185 TRMT2AQ8IZ69 625 aaKnown RBP11.14□□□□□ -0.63
HERC4-203ENST00000395185 PARP4Q9UKK3 1724 aaKnown RBP11.14□□□□□ -0.63
HERC4-203ENST00000395185 NFE2L2Q16236 605 aa11.13□□□□□ -0.63
HERC4-203ENST00000395185 SLC15A2Q16348 729 aa11.13□□□□□ -0.63
HERC4-203ENST00000395185 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
HERC4-203ENST00000395185 PIP4P2Q8N4L2 257 aa11.13□□□□□ -0.63
HERC4-203ENST00000395185 CCNL1Q9UK58 526 aaPredicted RBP11.13□□□□□ -0.63
HERC4-203ENST00000395185 TRIM35Q9UPQ4 493 aa11.13□□□□□ -0.63
HERC4-203ENST00000395185 LTN1O94822 1766 aa11.13□□□□□ -0.63
HERC4-203ENST00000395185 AKAP4Q5JQC9 854 aa11.12□□□□□ -0.63
HERC4-203ENST00000395185 WDR63Q8IWG1 891 aa11.12□□□□□ -0.63
HERC4-203ENST00000395185 PIGBQ92521 554 aa11.12□□□□□ -0.63
HERC4-203ENST00000395185 GAS2L2Q8NHY3 880 aa11.11□□□□□ -0.63
HERC4-203ENST00000395185 SPON1Q9HCB6 807 aa11.11□□□□□ -0.63
HERC4-203ENST00000395185 TFCP2L1Q9NZI6 479 aa11.11□□□□□ -0.63
HERC4-203ENST00000395185 RGPD5Q99666 1765 aa11.11□□□□□ -0.63
HERC4-203ENST00000395185 LRRC37A3O60309 1634 aa11.09□□□□□ -0.63
HERC4-203ENST00000395185 HTATSF1O43719 755 aaKnown RBP11.09□□□□□ -0.63
HERC4-203ENST00000395185 RIPK4P57078 832 aa11.09□□□□□ -0.63
HERC4-203ENST00000395185 SLFN5Q08AF3 891 aa11.09□□□□□ -0.63
HERC4-203ENST00000395185 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
HERC4-203ENST00000395185 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
HERC4-203ENST00000395185 FLAD1Q8NFF5 587 aa11.09□□□□□ -0.63
HERC4-203ENST00000395185 LRRC4BQ9NT99 713 aa11.09□□□□□ -0.63
HERC4-203ENST00000395185 PPP1R1BQ9UD71 204 aaPredicted RBP11.09□□□□□ -0.63
HERC4-203ENST00000395185 RRP7AQ9Y3A4 280 aaKnown RBP11.09□□□□□ -0.63
HERC4-203ENST00000395185 IL16Q14005 1332 aa11.09□□□□□ -0.63
HERC4-203ENST00000395185 MAPK8IP3Q9UPT6 1336 aa11.09□□□□□ -0.63
HERC4-203ENST00000395185 FAM208AQ9UK61 1670 aaKnown RBP11.08□□□□□ -0.64
HERC4-203ENST00000395185 SLC16A10Q8TF71 515 aa11.08□□□□□ -0.64
HERC4-203ENST00000395185 RTF1Q92541 710 aaKnown RBP11.08□□□□□ -0.64
HERC4-203ENST00000395185 CDCA7LQ96GN5 454 aa11.08□□□□□ -0.64
HERC4-203ENST00000395185 ASAP1Q9ULH1 1129 aa11.08□□□□□ -0.64
HERC4-203ENST00000395185 SENP3-EIF4A1A0A087X0R7 540 aa11.07□□□□□ -0.64
HERC4-203ENST00000395185 LOC102724428A0A0B4J2F2 783 aa11.07□□□□□ -0.64
HERC4-203ENST00000395185 GNAT3A8MTJ3 354 aa11.07□□□□□ -0.64
HERC4-203ENST00000395185 CENPBP07199 599 aaPredicted RBP11.07□□□□□ -0.64
HERC4-203ENST00000395185 ZNF853P0CG23 659 aa11.07□□□□□ -0.64
HERC4-203ENST00000395185 ATP6V1AP38606 617 aa11.07□□□□□ -0.64
HERC4-203ENST00000395185 KCNQ4P56696 695 aa11.07□□□□□ -0.64
HERC4-203ENST00000395185 SIK1P57059 783 aa11.07□□□□□ -0.64
HERC4-203ENST00000395185 GOLGA2Q08379 1002 aa11.07□□□□□ -0.64
HERC4-203ENST00000395185 ANO8Q9HCE9 1232 aaPredicted RBP11.07□□□□□ -0.64
HERC4-203ENST00000395185 ATG3Q9NT62 314 aa11.07□□□□□ -0.64
HERC4-203ENST00000395185 PALLDQ8WX93 1383 aa11.06□□□□□ -0.64
HERC4-203ENST00000395185 RNMTO43148 476 aaKnown RBP11.06□□□□□ -0.64
HERC4-203ENST00000395185 TEFQ10587 303 aa11.06□□□□□ -0.64
HERC4-203ENST00000395185 DUSP27Q5VZP5 1158 aa11.06□□□□□ -0.64
HERC4-203ENST00000395185 AK7Q96M32 723 aa11.06□□□□□ -0.64
HERC4-203ENST00000395185 SALL2Q9Y467 1007 aaPredicted RBP11.06□□□□□ -0.64
HERC4-203ENST00000395185 SRCAPQ6ZRS2 3230 aa11.05□□□□□ -0.64
HERC4-203ENST00000395185 E9PSI1 815 aa11.05□□□□□ -0.64
HERC4-203ENST00000395185 ZBTB7AO95365 584 aa11.05□□□□□ -0.64
HERC4-203ENST00000395185 PRKAR2AP13861 404 aaKnown RBP11.05□□□□□ -0.64
HERC4-203ENST00000395185 LMOD3Q0VAK6 560 aa11.05□□□□□ -0.64
HERC4-203ENST00000395185 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
HERC4-203ENST00000395185 IL17REQ8NFR9 667 aa11.05□□□□□ -0.64
HERC4-203ENST00000395185 MTFR1LQ9H019 292 aa11.05□□□□□ -0.64
HERC4-203ENST00000395185 SLC52A2Q9HAB3 445 aa11.05□□□□□ -0.64
HERC4-203ENST00000395185 LGR6Q9HBX8 967 aa11.05□□□□□ -0.64
HERC4-203ENST00000395185 POLD1P28340 1107 aa11.04□□□□□ -0.64
HERC4-203ENST00000395185 CEMIPQ8WUJ3 1361 aa11.03□□□□□ -0.64
HERC4-203ENST00000395185 CHL1O00533 1208 aa11.03□□□□□ -0.64
HERC4-203ENST00000395185 PTCD1O75127 700 aaKnown RBP11.03□□□□□ -0.64
HERC4-203ENST00000395185 ZNF827Q17R98 1081 aa11.03□□□□□ -0.64
HERC4-203ENST00000395185 TTC5Q8N0Z6 440 aa11.03□□□□□ -0.64
HERC4-203ENST00000395185 CALD1Q05682 793 aaKnown RBP11.02□□□□□ -0.65
HERC4-203ENST00000395185 TRAPPC3LQ5T215 181 aa11.02□□□□□ -0.65
HERC4-203ENST00000395185 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
HERC4-203ENST00000395185 BABAM1Q9NWV8 329 aa11.02□□□□□ -0.65
HERC4-203ENST00000395185 RTCBQ9Y3I0 505 aaKnown RBP11.02□□□□□ -0.65
HERC4-203ENST00000395185 RC3H1Q5TC82 1133 aaKnown RBP11.01□□□□□ -0.65
HERC4-203ENST00000395185 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
HERC4-203ENST00000395185 TEX13AQ9BXU3 409 aaPredicted RBP11.01□□□□□ -0.65
HERC4-203ENST00000395185 PDGFDQ9GZP0 370 aaPredicted RBP11.01□□□□□ -0.65
HERC4-203ENST00000395185 IFT57Q9NWB7 429 aa11.01□□□□□ -0.65
HERC4-203ENST00000395185 FBXO3Q9UK99 471 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms