RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 RPAP2Q8IXW5 612 aaPredicted RBP17.37■□□□□ 0.37
CLIP2-203ENST00000395060 RTL1A6NKG5 1358 aa17.37■□□□□ 0.37
CLIP2-203ENST00000395060 CPA1P15085 419 aa17.37■□□□□ 0.37
CLIP2-203ENST00000395060 CSPP1Q1MSJ5 1256 aa17.37■□□□□ 0.37
CLIP2-203ENST00000395060 SPC24Q8NBT2 197 aa17.37■□□□□ 0.37
CLIP2-203ENST00000395060 COG3Q96JB2 828 aa17.37■□□□□ 0.37
CLIP2-203ENST00000395060 IL25Q9H293 177 aa17.37■□□□□ 0.37
CLIP2-203ENST00000395060 CNPY2Q9Y2B0 182 aa17.37■□□□□ 0.37
CLIP2-203ENST00000395060 PIK3R4Q99570 1358 aa17.37■□□□□ 0.37
CLIP2-203ENST00000395060 HS1BP3Q53T59 392 aa17.36■□□□□ 0.37
CLIP2-203ENST00000395060 WASLO00401 505 aaPredicted RBP17.36■□□□□ 0.37
CLIP2-203ENST00000395060 IGSF3O75054 1194 aa17.36■□□□□ 0.37
CLIP2-203ENST00000395060 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
CLIP2-203ENST00000395060 SLC26A8Q96RN1 970 aa17.36■□□□□ 0.37
CLIP2-203ENST00000395060 A2ML1A8K2U0 1454 aa17.36■□□□□ 0.37
CLIP2-203ENST00000395060 DIP2BQ9P265 1576 aa17.36■□□□□ 0.37
CLIP2-203ENST00000395060 MBD3O95983 291 aa17.36■□□□□ 0.37
CLIP2-203ENST00000395060 NUTM1Q86Y26 1132 aa17.35■□□□□ 0.37
CLIP2-203ENST00000395060 BRD1O95696 1058 aa17.35■□□□□ 0.37
CLIP2-203ENST00000395060 ATP10DQ9P241 1426 aa17.35■□□□□ 0.37
CLIP2-203ENST00000395060 PNMA6EA0A0J9YXQ4 647 aa17.34■□□□□ 0.37
CLIP2-203ENST00000395060 SPDYE4A6NLX3 237 aa17.34■□□□□ 0.37
CLIP2-203ENST00000395060 ADCY5O95622 1261 aa17.34■□□□□ 0.37
CLIP2-203ENST00000395060 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
CLIP2-203ENST00000395060 ESYT1Q9BSJ8 1104 aa17.34■□□□□ 0.37
CLIP2-203ENST00000395060 PRDM4Q9UKN5 801 aa17.34■□□□□ 0.37
CLIP2-203ENST00000395060 USP32Q8NFA0 1604 aa17.34■□□□□ 0.37
CLIP2-203ENST00000395060 DYNC1I1O14576 645 aa17.34■□□□□ 0.37
CLIP2-203ENST00000395060 CLTCQ00610 1675 aaKnown RBP17.34■□□□□ 0.37
CLIP2-203ENST00000395060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.33■□□□□ 0.37
CLIP2-203ENST00000395060 GIMAP6Q6P9H5 292 aa17.33■□□□□ 0.37
CLIP2-203ENST00000395060 KNDC1Q76NI1 1749 aa17.33■□□□□ 0.36
CLIP2-203ENST00000395060 A0A0U1RQG5 324 aaPredicted RBP17.33■□□□□ 0.36
CLIP2-203ENST00000395060 HMMRO75330 724 aa17.33■□□□□ 0.36
CLIP2-203ENST00000395060 MCCP23508 829 aa17.32■□□□□ 0.36
CLIP2-203ENST00000395060 MX1P20591 662 aa17.32■□□□□ 0.36
CLIP2-203ENST00000395060 FKBP5Q13451 457 aaPredicted RBP17.32■□□□□ 0.36
CLIP2-203ENST00000395060 HSP90AB2PQ58FF8 381 aa17.32■□□□□ 0.36
CLIP2-203ENST00000395060 SRCIN1Q9C0H9 1055 aa17.32■□□□□ 0.36
CLIP2-203ENST00000395060 TSPYL4Q9UJ04 414 aa17.32■□□□□ 0.36
CLIP2-203ENST00000395060 ARHGEF40Q8TER5 1519 aa17.32■□□□□ 0.36
CLIP2-203ENST00000395060 SYAP1Q96A49 352 aaPredicted RBP17.31■□□□□ 0.36
CLIP2-203ENST00000395060 PPP6R1Q9UPN7 881 aa17.31■□□□□ 0.36
CLIP2-203ENST00000395060 NOLC1Q14978 699 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLIP2-203ENST00000395060 EIF4A2Q14240 407 aaKnown RBP17.3■□□□□ 0.36
CLIP2-203ENST00000395060 MAP7D2Q96T17 732 aa17.3■□□□□ 0.36
CLIP2-203ENST00000395060 LRRCC1Q9C099 1032 aa17.3■□□□□ 0.36
CLIP2-203ENST00000395060 CHMLP26374 656 aa17.3■□□□□ 0.36
CLIP2-203ENST00000395060 CCDC61Q9Y6R9 512 aa17.3■□□□□ 0.36
CLIP2-203ENST00000395060 TERF1P54274 439 aa17.29■□□□□ 0.36
CLIP2-203ENST00000395060 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
CLIP2-203ENST00000395060 GNAI2P04899 355 aa17.28■□□□□ 0.36
CLIP2-203ENST00000395060 LTKP29376 864 aa17.28■□□□□ 0.36
CLIP2-203ENST00000395060 PPP4R3BQ5MIZ7 849 aa17.28■□□□□ 0.36
CLIP2-203ENST00000395060 LRRFIP2Q9Y608 721 aaKnown RBP17.28■□□□□ 0.36
CLIP2-203ENST00000395060 ZNF710Q8N1W2 664 aa17.27■□□□□ 0.36
CLIP2-203ENST00000395060 PLEKHG5O94827 1062 aa17.27■□□□□ 0.36
CLIP2-203ENST00000395060 MCM5P33992 734 aa17.26■□□□□ 0.35
CLIP2-203ENST00000395060 HDGFP51858 240 aaKnown RBP17.26■□□□□ 0.35
CLIP2-203ENST00000395060 CAMK4Q16566 473 aa17.26■□□□□ 0.35
CLIP2-203ENST00000395060 RGS12O14924 1447 aa17.26■□□□□ 0.35
CLIP2-203ENST00000395060 VPS37CA5D8V6 355 aaPredicted RBP17.26■□□□□ 0.35
CLIP2-203ENST00000395060 CHL1O00533 1208 aa17.26■□□□□ 0.35
CLIP2-203ENST00000395060 RTF1Q92541 710 aaKnown RBP17.26■□□□□ 0.35
CLIP2-203ENST00000395060 PRR36Q9H6K5 1346 aa17.25■□□□□ 0.35
CLIP2-203ENST00000395060 FAM173BQ6P4H8 233 aa17.25■□□□□ 0.35
CLIP2-203ENST00000395060 CWC27Q6UX04 472 aaKnown RBP17.25■□□□□ 0.35
CLIP2-203ENST00000395060 FERMT3Q86UX7 667 aa17.25■□□□□ 0.35
CLIP2-203ENST00000395060 MYRIPQ8NFW9 859 aa17.25■□□□□ 0.35
CLIP2-203ENST00000395060 TNRQ92752 1358 aa17.25■□□□□ 0.35
CLIP2-203ENST00000395060 PHF14O94880 888 aa17.25■□□□□ 0.35
CLIP2-203ENST00000395060 PYCARDQ9ULZ3 195 aa17.25■□□□□ 0.35
CLIP2-203ENST00000395060 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
CLIP2-203ENST00000395060 CUL4AQ13619 759 aa17.24■□□□□ 0.35
CLIP2-203ENST00000395060 CCDC83Q8IWF9 413 aa17.24■□□□□ 0.35
CLIP2-203ENST00000395060 DNM1Q05193 864 aaKnown RBP17.24■□□□□ 0.35
CLIP2-203ENST00000395060 ATP2B3Q16720 1220 aa17.24■□□□□ 0.35
CLIP2-203ENST00000395060 STK31Q9BXU1 1019 aa17.24■□□□□ 0.35
CLIP2-203ENST00000395060 AP5Z1O43299 807 aa17.23■□□□□ 0.35
CLIP2-203ENST00000395060 RASEFQ8IZ41 740 aa17.23■□□□□ 0.35
CLIP2-203ENST00000395060 CCDC94Q9BW85 323 aaPredicted RBP17.23■□□□□ 0.35
CLIP2-203ENST00000395060 MAP2P11137 1827 aaKnown RBP17.23■□□□□ 0.35
CLIP2-203ENST00000395060 LARGE1O95461 756 aa17.23■□□□□ 0.35
CLIP2-203ENST00000395060 PIBF1Q8WXW3 757 aa17.23■□□□□ 0.35
CLIP2-203ENST00000395060 SURF6O75683 361 aaKnown RBP17.23■□□□□ 0.35
CLIP2-203ENST00000395060 SYT1P21579 422 aa17.23■□□□□ 0.35
CLIP2-203ENST00000395060 AK2P54819 239 aa17.22■□□□□ 0.35
CLIP2-203ENST00000395060 CCDC183Q5T5S1 534 aa17.22■□□□□ 0.35
CLIP2-203ENST00000395060 LTV1Q96GA3 475 aaPredicted RBP17.22■□□□□ 0.35
CLIP2-203ENST00000395060 KIF3AQ9Y496 699 aa17.22■□□□□ 0.35
CLIP2-203ENST00000395060 ROBO2Q9HCK4 1378 aa17.22■□□□□ 0.35
CLIP2-203ENST00000395060 MCM2P49736 904 aa17.22■□□□□ 0.35
CLIP2-203ENST00000395060 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
CLIP2-203ENST00000395060 SMC3Q9UQE7 1217 aa17.22■□□□□ 0.35
CLIP2-203ENST00000395060 MTHFSDQ2M296 383 aaKnown RBP17.21■□□□□ 0.35
CLIP2-203ENST00000395060 TCEANC2Q96MN5 208 aa17.21■□□□□ 0.35
CLIP2-203ENST00000395060 BCL2L12Q9HB09 334 aa17.21■□□□□ 0.35
CLIP2-203ENST00000395060 PTPRCP08575 1304 aa17.21■□□□□ 0.35
CLIP2-203ENST00000395060 CASTP20810 708 aaKnown RBP17.21■□□□□ 0.34
CLIP2-203ENST00000395060 U2AF2P26368 475 aaKnown RBP eCLIP17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms