RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TRMT112Q9UI30 125 aaKnown RBP12.19□□□□□ -0.46
COL4A6-203ENST00000394872 RAB11FIP3O75154 756 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 DDX11Q96FC9 970 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 PHF8Q9UPP1 1060 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 ANKRD62A6NC57 917 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 IFIT5Q13325 482 aaKnown RBP12.19□□□□□ -0.46
COL4A6-203ENST00000394872 CCDC141Q6ZP82 1450 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 PPP6R1Q9UPN7 881 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 TOP2BQ02880 1626 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 HSP90AB3PQ58FF7 597 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 SCLT1Q96NL6 688 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 SLC5A1P13866 664 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 AMOTL2Q9Y2J4 779 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
COL4A6-203ENST00000394872 TRIM21P19474 475 aaKnown RBP12.18□□□□□ -0.46
COL4A6-203ENST00000394872 PAXIP1Q6ZW49 1069 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-203ENST00000394872 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
COL4A6-203ENST00000394872 GOLGA6L10A6NI86 522 aa12.18□□□□□ -0.46
COL4A6-203ENST00000394872 NME9Q86XW9 330 aa12.18□□□□□ -0.46
COL4A6-203ENST00000394872 CWC15Q9P013 229 aaKnown RBP12.18□□□□□ -0.46
COL4A6-203ENST00000394872 FOXO3O43524 673 aa12.18□□□□□ -0.46
COL4A6-203ENST00000394872 ZRSR2Q15696 482 aaKnown RBP12.18□□□□□ -0.46
COL4A6-203ENST00000394872 ANKRD18AQ8IVF6 992 aa12.18□□□□□ -0.46
COL4A6-203ENST00000394872 NAPBQ9H115 298 aa12.18□□□□□ -0.46
COL4A6-203ENST00000394872 BOLA2Q9H3K6 86 aa12.18□□□□□ -0.46
COL4A6-203ENST00000394872 EXOC5O00471 708 aa12.17□□□□□ -0.46
COL4A6-203ENST00000394872 CCDC96Q2M329 555 aa12.17□□□□□ -0.46
COL4A6-203ENST00000394872 FAM177A1Q8N128 213 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-203ENST00000394872 MAP3K12Q12852 859 aa12.17□□□□□ -0.46
COL4A6-203ENST00000394872 ZNF444Q8N0Y2 327 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-203ENST00000394872 SMARCA5O60264 1052 aaPredicted RBP12.17□□□□□ -0.46
COL4A6-203ENST00000394872 LRPPRCP42704 1394 aaKnown RBP12.17□□□□□ -0.46
COL4A6-203ENST00000394872 PPP4R3AQ6IN85 833 aa12.16□□□□□ -0.46
COL4A6-203ENST00000394872 KIF14Q15058 1648 aa12.16□□□□□ -0.46
COL4A6-203ENST00000394872 ANKRD18BA2A2Z9 1011 aa12.16□□□□□ -0.46
COL4A6-203ENST00000394872 GLRX3O76003 335 aaKnown RBP12.16□□□□□ -0.46
COL4A6-203ENST00000394872 SSR1P43307 286 aaKnown RBP12.16□□□□□ -0.46
COL4A6-203ENST00000394872 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
COL4A6-203ENST00000394872 ADGRL1O94910 1474 aa12.16□□□□□ -0.46
COL4A6-203ENST00000394872 MX1P20591 662 aa12.16□□□□□ -0.46
COL4A6-203ENST00000394872 NUP62CLQ9H1M0 184 aa12.16□□□□□ -0.46
COL4A6-203ENST00000394872 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
COL4A6-203ENST00000394872 WDR78Q5VTH9 848 aa12.16□□□□□ -0.46
COL4A6-203ENST00000394872 EIF5P55010 431 aaKnown RBP12.16□□□□□ -0.46
COL4A6-203ENST00000394872 RANBP6O60518 1105 aaKnown RBP12.15□□□□□ -0.46
COL4A6-203ENST00000394872 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
COL4A6-203ENST00000394872 IQGAP2Q13576 1575 aa12.15□□□□□ -0.46
COL4A6-203ENST00000394872 SLFN5Q08AF3 891 aa12.15□□□□□ -0.46
COL4A6-203ENST00000394872 PRPF40BQ6NWY9 871 aaKnown RBP12.15□□□□□ -0.46
COL4A6-203ENST00000394872 KRT28Q7Z3Y7 464 aa12.15□□□□□ -0.46
COL4A6-203ENST00000394872 CUL5Q93034 780 aa12.15□□□□□ -0.46
COL4A6-203ENST00000394872 UPF3BQ9BZI7 483 aaKnown RBP12.15□□□□□ -0.46
COL4A6-203ENST00000394872 KIAA0586Q9BVV6 1533 aa12.15□□□□□ -0.46
COL4A6-203ENST00000394872 PPP1R12BO60237 982 aaPredicted RBP12.15□□□□□ -0.46
COL4A6-203ENST00000394872 GPTP24298 496 aa12.15□□□□□ -0.46
COL4A6-203ENST00000394872 CEBPAP49715 358 aaPredicted RBP12.15□□□□□ -0.46
COL4A6-203ENST00000394872 TSPYL1Q9H0U9 437 aa12.15□□□□□ -0.46
COL4A6-203ENST00000394872 SMTNL1A8MU46 457 aa12.15□□□□□ -0.47
COL4A6-203ENST00000394872 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.47
COL4A6-203ENST00000394872 POTEJP0CG39 1038 aa12.15□□□□□ -0.47
COL4A6-203ENST00000394872 MTERF4Q7Z6M4 381 aaKnown RBP12.15□□□□□ -0.47
COL4A6-203ENST00000394872 DNAI2Q9GZS0 605 aa12.15□□□□□ -0.47
COL4A6-203ENST00000394872 HYPKQ9NX55 129 aa12.15□□□□□ -0.47
COL4A6-203ENST00000394872 ENOX2Q16206 610 aaKnown RBP12.14□□□□□ -0.47
COL4A6-203ENST00000394872 CAMSAP2Q08AD1 1489 aa12.14□□□□□ -0.47
COL4A6-203ENST00000394872 LEKR1Q6ZMV7 388 aa12.14□□□□□ -0.47
COL4A6-203ENST00000394872 C6orf229H3BNL8 230 aa12.14□□□□□ -0.47
COL4A6-203ENST00000394872 WASLO00401 505 aaPredicted RBP12.14□□□□□ -0.47
COL4A6-203ENST00000394872 CTCFLQ8NI51 663 aaPredicted RBP12.14□□□□□ -0.47
COL4A6-203ENST00000394872 CCDC8Q9H0W5 538 aaPredicted RBP12.14□□□□□ -0.47
COL4A6-203ENST00000394872 FBXO31Q5XUX0 539 aaPredicted RBP12.14□□□□□ -0.47
COL4A6-203ENST00000394872 CCDC83Q8IWF9 413 aa12.14□□□□□ -0.47
COL4A6-203ENST00000394872 MPNDQ8N594 471 aa12.14□□□□□ -0.47
COL4A6-203ENST00000394872 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
COL4A6-203ENST00000394872 KIAA1328Q86T90 577 aa12.13□□□□□ -0.47
COL4A6-203ENST00000394872 EMILIN1Q9Y6C2 1016 aa12.13□□□□□ -0.47
COL4A6-203ENST00000394872 CCDC196A0A1B0GTZ2 297 aa12.13□□□□□ -0.47
COL4A6-203ENST00000394872 DNAAF4Q8WXU2 420 aa12.13□□□□□ -0.47
COL4A6-203ENST00000394872 IQCA1Q86XH1 822 aa12.13□□□□□ -0.47
COL4A6-203ENST00000394872 ZNF397Q8NF99 534 aaPredicted RBP12.13□□□□□ -0.47
COL4A6-203ENST00000394872 F6X3S4 739 aa12.13□□□□□ -0.47
COL4A6-203ENST00000394872 ZNF213O14771 459 aa12.13□□□□□ -0.47
COL4A6-203ENST00000394872 HMGN5P82970 282 aaKnown RBP12.13□□□□□ -0.47
COL4A6-203ENST00000394872 CENPHQ9H3R5 247 aa12.13□□□□□ -0.47
COL4A6-203ENST00000394872 ZBTB3Q9H5J0 574 aa12.13□□□□□ -0.47
COL4A6-203ENST00000394872 JAKMIP3Q5VZ66 844 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 UBA5Q9GZZ9 404 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 SLC12A7Q9Y666 1083 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 HMGXB3Q12766 1538 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 ALDH1L2Q3SY69 923 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 IQCEQ6IPM2 695 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 TSG101Q99816 390 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 A0A087WZG4 1122 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 EHMT1Q9H9B1 1298 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 TAF4BQ92750 862 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 LRRFIP2Q9Y608 721 aaKnown RBP12.12□□□□□ -0.47
COL4A6-203ENST00000394872 PRXQ9BXM0 1461 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 EPB41L2O43491 1005 aaKnown RBP12.12□□□□□ -0.47
COL4A6-203ENST00000394872 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
COL4A6-203ENST00000394872 PDIA4P13667 645 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms