RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 LRRCC1Q9C099 1032 aa23.63■■□□□ 1.37
CXXC4-201ENST00000394767 PDZRN3Q9UPQ7 1066 aa23.63■■□□□ 1.37
CXXC4-201ENST00000394767 REC8O95072 547 aa23.63■■□□□ 1.37
CXXC4-201ENST00000394767 RPAP2Q8IXW5 612 aaPredicted RBP23.63■■□□□ 1.37
CXXC4-201ENST00000394767 PTPRCP08575 1304 aa23.63■■□□□ 1.37
CXXC4-201ENST00000394767 ZRSR1Q15695 479 aaKnown RBP23.63■■□□□ 1.37
CXXC4-201ENST00000394767 CCDC158Q5M9N0 1113 aa23.63■■□□□ 1.37
CXXC4-201ENST00000394767 TRIM27P14373 513 aa23.62■■□□□ 1.37
CXXC4-201ENST00000394767 COPS6Q7L5N1 327 aa23.62■■□□□ 1.37
CXXC4-201ENST00000394767 PDE4AP27815 886 aa23.62■■□□□ 1.37
CXXC4-201ENST00000394767 KRT24Q2M2I5 525 aa23.62■■□□□ 1.37
CXXC4-201ENST00000394767 XAGE3Q8WTP9 111 aa23.62■■□□□ 1.37
CXXC4-201ENST00000394767 FSD1Q9BTV5 496 aa23.62■■□□□ 1.37
CXXC4-201ENST00000394767 LGR6Q9HBX8 967 aa23.62■■□□□ 1.37
CXXC4-201ENST00000394767 KDM4FA0A1W2PPD8 638 aa23.62■■□□□ 1.37
CXXC4-201ENST00000394767 GNL3LQ9NVN8 582 aaKnown RBP23.61■■□□□ 1.37
CXXC4-201ENST00000394767 PRIM1P49642 420 aaKnown RBP23.61■■□□□ 1.37
CXXC4-201ENST00000394767 C20orf194Q5TEA3 1177 aa23.61■■□□□ 1.37
CXXC4-201ENST00000394767 TBC1D2BQ9UPU7 963 aa23.61■■□□□ 1.37
CXXC4-201ENST00000394767 TTC39AQ5SRH9 613 aa23.61■■□□□ 1.37
CXXC4-201ENST00000394767 RBM19Q9Y4C8 960 aaKnown RBP23.61■■□□□ 1.37
CXXC4-201ENST00000394767 ANKARQ7Z5J8 1434 aa23.6■■□□□ 1.37
CXXC4-201ENST00000394767 IL1RAPL2Q9NP60 686 aa23.6■■□□□ 1.37
CXXC4-201ENST00000394767 ZKSCAN1P17029 563 aaPredicted RBP23.59■■□□□ 1.37
CXXC4-201ENST00000394767 INSRP06213 1382 aa23.59■■□□□ 1.37
CXXC4-201ENST00000394767 EXOC6BQ9Y2D4 811 aa23.59■■□□□ 1.37
CXXC4-201ENST00000394767 CNTROBQ8N137 903 aa23.59■■□□□ 1.37
CXXC4-201ENST00000394767 GOLGA6L4A6NEF3 574 aa23.58■■□□□ 1.37
CXXC4-201ENST00000394767 ST18O60284 1047 aa23.58■■□□□ 1.37
CXXC4-201ENST00000394767 INTS3Q68E01 1043 aaKnown RBP23.58■■□□□ 1.37
CXXC4-201ENST00000394767 SPATA31A3Q5VYP0 1347 aa23.58■■□□□ 1.37
CXXC4-201ENST00000394767 CWC25Q9NXE8 425 aaPredicted RBP23.58■■□□□ 1.36
CXXC4-201ENST00000394767 QTRT2Q9H974 415 aaKnown RBP23.57■■□□□ 1.36
CXXC4-201ENST00000394767 TSPYL6Q8N831 410 aa23.57■■□□□ 1.36
CXXC4-201ENST00000394767 AACSQ86V21 672 aa23.57■■□□□ 1.36
CXXC4-201ENST00000394767 UBE3BQ7Z3V4 1068 aa23.57■■□□□ 1.36
CXXC4-201ENST00000394767 LRRFIP2Q9Y608 721 aaKnown RBP23.57■■□□□ 1.36
CXXC4-201ENST00000394767 PIK3C2BO00750 1634 aa23.57■■□□□ 1.36
CXXC4-201ENST00000394767 IFIT5Q13325 482 aaKnown RBP23.57■■□□□ 1.36
CXXC4-201ENST00000394767 ZNF790Q6PG37 636 aa23.57■■□□□ 1.36
CXXC4-201ENST00000394767 ZC3H13Q5T200 1668 aaKnown RBP23.56■■□□□ 1.36
CXXC4-201ENST00000394767 JARID2Q92833 1246 aaPredicted RBP23.56■■□□□ 1.36
CXXC4-201ENST00000394767 METTL24Q5JXM2 366 aa23.56■■□□□ 1.36
CXXC4-201ENST00000394767 CERKQ8TCT0 537 aa23.56■■□□□ 1.36
CXXC4-201ENST00000394767 TFCP2L1Q9NZI6 479 aa23.56■■□□□ 1.36
CXXC4-201ENST00000394767 TRPC5Q9UL62 973 aaPredicted RBP23.55■■□□□ 1.36
CXXC4-201ENST00000394767 RAD21O60216 631 aa23.55■■□□□ 1.36
CXXC4-201ENST00000394767 SLKQ9H2G2 1235 aaPredicted RBP23.55■■□□□ 1.36
CXXC4-201ENST00000394767 PPP1R42Q7Z4L9 355 aa23.54■■□□□ 1.36
CXXC4-201ENST00000394767 RTCBQ9Y3I0 505 aaKnown RBP23.54■■□□□ 1.36
CXXC4-201ENST00000394767 TULP1O00294 542 aaPredicted RBP23.54■■□□□ 1.36
CXXC4-201ENST00000394767 NOP58Q9Y2X3 529 aaKnown RBP23.54■■□□□ 1.36
CXXC4-201ENST00000394767 TRDNQ13061 729 aa23.54■■□□□ 1.36
CXXC4-201ENST00000394767 NBPF5PQ86XG9 351 aaPredicted RBP23.53■■□□□ 1.36
CXXC4-201ENST00000394767 RPGRQ92834 1020 aaKnown RBP23.53■■□□□ 1.36
CXXC4-201ENST00000394767 SLC52A2Q9HAB3 445 aa23.53■■□□□ 1.36
CXXC4-201ENST00000394767 AATKQ6ZMQ8 1374 aa23.53■■□□□ 1.36
CXXC4-201ENST00000394767 RNF20Q5VTR2 975 aa23.53■■□□□ 1.36
CXXC4-201ENST00000394767 FRMPD1Q5SYB0 1578 aa23.53■■□□□ 1.36
CXXC4-201ENST00000394767 FOXD4L1Q9NU39 408 aa23.52■■□□□ 1.36
CXXC4-201ENST00000394767 CCNL1Q9UK58 526 aaPredicted RBP23.52■■□□□ 1.36
CXXC4-201ENST00000394767 DZIP3Q86Y13 1208 aaKnown RBP23.52■■□□□ 1.36
CXXC4-201ENST00000394767 SETD1BQ9UPS6 1966 aaKnown RBP23.52■■□□□ 1.36
CXXC4-201ENST00000394767 VAMP4O75379 141 aa23.51■■□□□ 1.35
CXXC4-201ENST00000394767 FKBP4Q02790 459 aaKnown RBP eCLIP23.51■■□□□ 1.35
CXXC4-201ENST00000394767 CARD10Q9BWT7 1032 aa23.51■■□□□ 1.35
CXXC4-201ENST00000394767 SETDB2Q96T68 719 aa23.51■■□□□ 1.35
CXXC4-201ENST00000394767 CDC45O75419 566 aa23.51■■□□□ 1.35
CXXC4-201ENST00000394767 SPINK5Q9NQ38 1064 aaPredicted RBP23.5■■□□□ 1.35
CXXC4-201ENST00000394767 CEP170BQ9Y4F5 1589 aaPredicted RBP23.5■■□□□ 1.35
CXXC4-201ENST00000394767 ADAMTS13Q76LX8 1427 aa23.5■■□□□ 1.35
CXXC4-201ENST00000394767 MADDQ8WXG6 1647 aa23.5■■□□□ 1.35
CXXC4-201ENST00000394767 ZNF219Q9P2Y4 722 aaPredicted RBP23.5■■□□□ 1.35
CXXC4-201ENST00000394767 TRPM1Q7Z4N2 1603 aa23.5■■□□□ 1.35
CXXC4-201ENST00000394767 ANKRD18BA2A2Z9 1011 aa23.49■■□□□ 1.35
CXXC4-201ENST00000394767 KSR2Q6VAB6 950 aa23.49■■□□□ 1.35
CXXC4-201ENST00000394767 CHD1LQ86WJ1 897 aa23.49■■□□□ 1.35
CXXC4-201ENST00000394767 SYNE3Q6ZMZ3 975 aa23.49■■□□□ 1.35
CXXC4-201ENST00000394767 NIP7Q9Y221 180 aaKnown RBP eCLIP23.49■■□□□ 1.35
CXXC4-201ENST00000394767 TRIM35Q9UPQ4 493 aa23.49■■□□□ 1.35
CXXC4-201ENST00000394767 GNPATO15228 680 aa23.49■■□□□ 1.35
CXXC4-201ENST00000394767 ANKIB1Q9P2G1 1089 aa23.49■■□□□ 1.35
CXXC4-201ENST00000394767 WDR17Q8IZU2 1322 aa23.48■■□□□ 1.35
CXXC4-201ENST00000394767 NEXMIFQ5QGS0 1516 aa23.48■■□□□ 1.35
CXXC4-201ENST00000394767 PHKG2P15735 406 aa23.48■■□□□ 1.35
CXXC4-201ENST00000394767 KIF1BPQ96EK5 621 aa23.48■■□□□ 1.35
CXXC4-201ENST00000394767 ERBB3P21860 1342 aa23.47■■□□□ 1.35
CXXC4-201ENST00000394767 MAP4K4O95819 1239 aaPredicted RBP23.47■■□□□ 1.35
CXXC4-201ENST00000394767 NBPF14Q5TI25 921 aa23.47■■□□□ 1.35
CXXC4-201ENST00000394767 MRPL50Q8N5N7 158 aaKnown RBP23.47■■□□□ 1.35
CXXC4-201ENST00000394767 PREX1Q8TCU6 1659 aa23.47■■□□□ 1.35
CXXC4-201ENST00000394767 ANP32EQ9BTT0 268 aa23.47■■□□□ 1.35
CXXC4-201ENST00000394767 ARHGAP45Q92619 1136 aa23.46■■□□□ 1.35
CXXC4-201ENST00000394767 NUTM1Q86Y26 1132 aa23.46■■□□□ 1.35
CXXC4-201ENST00000394767 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.46■■□□□ 1.35
CXXC4-201ENST00000394767 ZNF772Q68DY9 489 aaPredicted RBP23.46■■□□□ 1.35
CXXC4-201ENST00000394767 CHL1O00533 1208 aa23.45■■□□□ 1.34
CXXC4-201ENST00000394767 DDX46Q7L014 1031 aaKnown RBP23.45■■□□□ 1.34
CXXC4-201ENST00000394767 IFIT1P09914 478 aaKnown RBP23.45■■□□□ 1.34
CXXC4-201ENST00000394767 AKAP2Q9Y2D5 859 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms