RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PREX1Q8TCU6 1659 aa6.88□□□□□ -1.31
RFFL-202ENST00000394597 KIAA1210Q9ULL0 1709 aa6.88□□□□□ -1.31
RFFL-202ENST00000394597 VGLL3A8MV65 326 aa6.88□□□□□ -1.31
RFFL-202ENST00000394597 DYNC1I1O14576 645 aa6.88□□□□□ -1.31
RFFL-202ENST00000394597 TRIM27P14373 513 aa6.88□□□□□ -1.31
RFFL-202ENST00000394597 GTF2E1P29083 439 aaPredicted RBP6.88□□□□□ -1.31
RFFL-202ENST00000394597 MROH1Q8NDA8 1641 aa6.88□□□□□ -1.31
RFFL-202ENST00000394597 AKAP4Q5JQC9 854 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 ARHGAP45Q92619 1136 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 LRRC59Q96AG4 307 aaKnown RBP6.87□□□□□ -1.31
RFFL-202ENST00000394597 TRIM35Q9UPQ4 493 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 TOM1O60784 492 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 SASS6Q6UVJ0 657 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 RPAP2Q8IXW5 612 aaPredicted RBP6.87□□□□□ -1.31
RFFL-202ENST00000394597 RILPL2Q969X0 211 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 PHF23Q9BUL5 403 aaPredicted RBP6.87□□□□□ -1.31
RFFL-202ENST00000394597 DIAPH3Q9NSV4 1193 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 SLAIN2Q9P270 581 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 TAOK2Q9UL54 1235 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 GOLGA6L6A8MZA4 724 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 CAVIN1Q6NZI2 390 aaKnown RBP6.87□□□□□ -1.31
RFFL-202ENST00000394597 RNF214Q8ND24 703 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 USP6P35125 1406 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 C8orf58Q8NAV2 365 aa6.87□□□□□ -1.31
RFFL-202ENST00000394597 PTPRCP08575 1304 aa6.86□□□□□ -1.31
RFFL-202ENST00000394597 SPATA31D1Q6ZQQ2 1576 aa6.86□□□□□ -1.31
RFFL-202ENST00000394597 TMEM94Q12767 1356 aa6.86□□□□□ -1.31
RFFL-202ENST00000394597 VAMP4O75379 141 aa6.86□□□□□ -1.31
RFFL-202ENST00000394597 LETM1O95202 739 aaPredicted RBP6.86□□□□□ -1.31
RFFL-202ENST00000394597 ADAMTS2O95450 1211 aa6.86□□□□□ -1.31
RFFL-202ENST00000394597 IFIT2P09913 472 aaKnown RBP6.86□□□□□ -1.31
RFFL-202ENST00000394597 MYL6BP14649 208 aa6.86□□□□□ -1.31
RFFL-202ENST00000394597 QRICH2Q9H0J4 1663 aa6.86□□□□□ -1.31
RFFL-202ENST00000394597 OFD1O75665 1012 aa6.86□□□□□ -1.31
RFFL-202ENST00000394597 SURF6O75683 361 aaKnown RBP6.86□□□□□ -1.31
RFFL-202ENST00000394597 FOXD4L5Q5VV16 416 aaPredicted RBP6.86□□□□□ -1.31
RFFL-202ENST00000394597 MCTP1Q6DN14 999 aa6.86□□□□□ -1.31
RFFL-202ENST00000394597 PDCL2Q8N4E4 241 aa6.86□□□□□ -1.31
RFFL-202ENST00000394597 FOXD4L4Q8WXT5 416 aaPredicted RBP6.86□□□□□ -1.31
RFFL-202ENST00000394597 PPP4R3BQ5MIZ7 849 aa6.86□□□□□ -1.31
RFFL-202ENST00000394597 MRPL50Q8N5N7 158 aaKnown RBP6.85□□□□□ -1.31
RFFL-202ENST00000394597 DBF4Q9UBU7 674 aaPredicted RBP6.85□□□□□ -1.31
RFFL-202ENST00000394597 EXOC5O00471 708 aa6.85□□□□□ -1.31
RFFL-202ENST00000394597 PLEKHF1Q96S99 279 aa6.85□□□□□ -1.31
RFFL-202ENST00000394597 KIF3AQ9Y496 699 aa6.85□□□□□ -1.31
RFFL-202ENST00000394597 PTPRMP28827 1452 aa6.85□□□□□ -1.31
RFFL-202ENST00000394597 DLC1Q96QB1 1528 aa6.85□□□□□ -1.31
RFFL-202ENST00000394597 REREQ9P2R6 1566 aa6.85□□□□□ -1.31
RFFL-202ENST00000394597 ANKARQ7Z5J8 1434 aa6.85□□□□□ -1.31
RFFL-202ENST00000394597 KIF6Q6ZMV9 814 aa6.85□□□□□ -1.31
RFFL-202ENST00000394597 ZCRB1Q8TBF4 217 aaKnown RBP6.85□□□□□ -1.31
RFFL-202ENST00000394597 TMOD3Q9NYL9 352 aa6.85□□□□□ -1.31
RFFL-202ENST00000394597 PHF14O94880 888 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 FLIIQ13045 1269 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 MPNDQ8N594 471 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 DDX17Q92841 729 aaKnown RBP6.84□□□□□ -1.31
RFFL-202ENST00000394597 FMNL2Q96PY5 1086 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 GTPBP4Q9BZE4 634 aaKnown RBP6.84□□□□□ -1.31
RFFL-202ENST00000394597 HYPKQ9NX55 129 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 ARHGEF10O15013 1369 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 MAP3K5Q99683 1374 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 SPDYE4A6NLX3 237 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 CHD1LQ86WJ1 897 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 TSPYL6Q8N831 410 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 CCDC94Q9BW85 323 aaPredicted RBP6.84□□□□□ -1.31
RFFL-202ENST00000394597 TBC1D2Q9BYX2 928 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 TMEM131LA2VDJ0 1609 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 LMTK3Q96Q04 1460 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 F6X3S4 739 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 PTCD1O75127 700 aaKnown RBP6.84□□□□□ -1.31
RFFL-202ENST00000394597 KIF20AO95235 890 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 CLASRPQ8N2M8 674 aaKnown RBP6.84□□□□□ -1.31
RFFL-202ENST00000394597 TULP4Q9NRJ4 1543 aa6.84□□□□□ -1.31
RFFL-202ENST00000394597 ADAMTS13Q76LX8 1427 aa6.84□□□□□ -1.32
RFFL-202ENST00000394597 IQGAP1P46940 1657 aa6.84□□□□□ -1.32
RFFL-202ENST00000394597 ADGRB1O14514 1584 aa6.84□□□□□ -1.32
RFFL-202ENST00000394597 CHL1O00533 1208 aa6.84□□□□□ -1.32
RFFL-202ENST00000394597 ERC2O15083 957 aa6.84□□□□□ -1.32
RFFL-202ENST00000394597 REC8O95072 547 aa6.84□□□□□ -1.32
RFFL-202ENST00000394597 IRX3P78415 501 aaPredicted RBP6.84□□□□□ -1.32
RFFL-202ENST00000394597 NBPF6Q5VWK0 638 aa6.84□□□□□ -1.32
RFFL-202ENST00000394597 LARP1Q6PKG0 1096 aaKnown RBP6.84□□□□□ -1.32
RFFL-202ENST00000394597 GOLGA6L1Q8N7Z2 621 aa6.84□□□□□ -1.32
RFFL-202ENST00000394597 NBPF4Q96M43 638 aa6.84□□□□□ -1.32
RFFL-202ENST00000394597 BABAM1Q9NWV8 329 aa6.84□□□□□ -1.32
RFFL-202ENST00000394597 ERICH4A6NGS2 130 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 UBAP1LF5GYI3 381 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 IGSF3O75054 1194 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 STARD3NLO95772 234 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 INTS3Q68E01 1043 aaKnown RBP6.83□□□□□ -1.32
RFFL-202ENST00000394597 ZNF592Q92610 1267 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 NGLY1Q96IV0 654 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 MROH2AA6NES4 1674 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 NRDCO43847 1150 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 ERC1Q8IUD2 1116 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 TRMT2AQ8IZ69 625 aaKnown RBP6.83□□□□□ -1.32
RFFL-202ENST00000394597 RUFY2Q8WXA3 655 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 DNAAF4Q8WXU2 420 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 PPLO60437 1756 aa6.83□□□□□ -1.32
RFFL-202ENST00000394597 TRERF1Q96PN7 1200 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms