RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PRDM11Q9NQV5 511 aa19■□□□□ 0.63
CCT4-201ENST00000394440 ZBTB7BO15156 539 aaPredicted RBP19■□□□□ 0.63
CCT4-201ENST00000394440 CSB-PGBD3P0DP91 1061 aa19■□□□□ 0.63
CCT4-201ENST00000394440 N4BP2Q86UW6 1770 aaPredicted RBP19■□□□□ 0.63
CCT4-201ENST00000394440 WDR17Q8IZU2 1322 aa18.99■□□□□ 0.63
CCT4-201ENST00000394440 TATP17735 454 aaPredicted RBP18.99■□□□□ 0.63
CCT4-201ENST00000394440 HDAC1Q13547 482 aaPredicted RBP18.98■□□□□ 0.63
CCT4-201ENST00000394440 RWDD1Q9H446 243 aaPredicted RBP18.98■□□□□ 0.63
CCT4-201ENST00000394440 TEFQ10587 303 aa18.98■□□□□ 0.63
CCT4-201ENST00000394440 KDM6AO15550 1401 aaPredicted RBP18.98■□□□□ 0.63
CCT4-201ENST00000394440 SLC4A2P04920 1241 aa18.97■□□□□ 0.63
CCT4-201ENST00000394440 EIF4A1P60842 406 aaKnown RBP18.97■□□□□ 0.63
CCT4-201ENST00000394440 INTS3Q68E01 1043 aaKnown RBP18.97■□□□□ 0.63
CCT4-201ENST00000394440 PRKCSHP14314 528 aaPredicted RBP18.97■□□□□ 0.63
CCT4-201ENST00000394440 CHMP4BQ9H444 224 aaKnown RBP18.97■□□□□ 0.63
CCT4-201ENST00000394440 MRC1P22897 1456 aa18.97■□□□□ 0.63
CCT4-201ENST00000394440 SOCS7O14512 581 aa18.96■□□□□ 0.63
CCT4-201ENST00000394440 HOXB7P09629 217 aa18.96■□□□□ 0.63
CCT4-201ENST00000394440 CCDC30Q5VVM6 783 aa18.96■□□□□ 0.63
CCT4-201ENST00000394440 SPG7Q9UQ90 795 aa18.96■□□□□ 0.63
CCT4-201ENST00000394440 PHKG2P15735 406 aa18.95■□□□□ 0.62
CCT4-201ENST00000394440 SHANK3Q9BYB0 1731 aa18.95■□□□□ 0.62
CCT4-201ENST00000394440 G2E3Q7L622 706 aa18.95■□□□□ 0.62
CCT4-201ENST00000394440 HEG1Q9ULI3 1381 aa18.94■□□□□ 0.62
CCT4-201ENST00000394440 BTBD11A6QL63 1104 aa18.94■□□□□ 0.62
CCT4-201ENST00000394440 STK31Q9BXU1 1019 aa18.94■□□□□ 0.62
CCT4-201ENST00000394440 COL16A1Q07092 1604 aaPredicted RBP18.93■□□□□ 0.62
CCT4-201ENST00000394440 KCNQ3O43525 872 aa18.93■□□□□ 0.62
CCT4-201ENST00000394440 COL14A1Q05707 1796 aaKnown RBP18.93■□□□□ 0.62
CCT4-201ENST00000394440 IFNL2Q8IZJ0 200 aa18.92■□□□□ 0.62
CCT4-201ENST00000394440 PHLPP1O60346 1717 aa18.92■□□□□ 0.62
CCT4-201ENST00000394440 CYP27B1O15528 508 aa18.92■□□□□ 0.62
CCT4-201ENST00000394440 PDE4AP27815 886 aa18.92■□□□□ 0.62
CCT4-201ENST00000394440 SMC5Q8IY18 1101 aa18.91■□□□□ 0.62
CCT4-201ENST00000394440 BACH2Q9BYV9 841 aa18.91■□□□□ 0.62
CCT4-201ENST00000394440 HDGFL1Q5TGJ6 251 aa18.91■□□□□ 0.62
CCT4-201ENST00000394440 RGS3P49796 1198 aa18.9■□□□□ 0.62
CCT4-201ENST00000394440 FLIIQ13045 1269 aa18.9■□□□□ 0.62
CCT4-201ENST00000394440 TOM1L2Q6ZVM7 507 aa18.9■□□□□ 0.62
CCT4-201ENST00000394440 CARD10Q9BWT7 1032 aa18.9■□□□□ 0.62
CCT4-201ENST00000394440 PDZRN3Q9UPQ7 1066 aa18.9■□□□□ 0.62
CCT4-201ENST00000394440 PXDNLA1KZ92 1463 aa18.9■□□□□ 0.62
CCT4-201ENST00000394440 SLC52A2Q9HAB3 445 aa18.89■□□□□ 0.61
CCT4-201ENST00000394440 C5P01031 1676 aa18.89■□□□□ 0.61
CCT4-201ENST00000394440 DCAF5Q96JK2 942 aa18.88■□□□□ 0.61
CCT4-201ENST00000394440 ATP10DQ9P241 1426 aa18.88■□□□□ 0.61
CCT4-201ENST00000394440 NECTIN2Q92692 538 aa18.88■□□□□ 0.61
CCT4-201ENST00000394440 CHMP4AQ9BY43 222 aa18.88■□□□□ 0.61
CCT4-201ENST00000394440 C1orf115Q9H7X2 142 aa18.87■□□□□ 0.61
CCT4-201ENST00000394440 LARP1Q6PKG0 1096 aaKnown RBP18.87■□□□□ 0.61
CCT4-201ENST00000394440 PLCH1Q4KWH8 1693 aa18.86■□□□□ 0.61
CCT4-201ENST00000394440 F6X3S4 739 aa18.86■□□□□ 0.61
CCT4-201ENST00000394440 GIGYF1O75420 1035 aaPredicted RBP18.86■□□□□ 0.61
CCT4-201ENST00000394440 HSP90AB1P08238 724 aaKnown RBP18.86■□□□□ 0.61
CCT4-201ENST00000394440 SIRT2Q8IXJ6 389 aa18.86■□□□□ 0.61
CCT4-201ENST00000394440 GLI3P10071 1580 aa18.86■□□□□ 0.61
CCT4-201ENST00000394440 CCT4P50991 539 aaKnown RBP18.85■□□□□ 0.61
CCT4-201ENST00000394440 PCDH11XQ9BZA7 1347 aa18.85■□□□□ 0.61
CCT4-201ENST00000394440 PCDH11YQ9BZA8 1340 aa18.85■□□□□ 0.61
CCT4-201ENST00000394440 FKBP5Q13451 457 aaPredicted RBP18.84■□□□□ 0.61
CCT4-201ENST00000394440 WNK3Q9BYP7 1800 aa18.84■□□□□ 0.61
CCT4-201ENST00000394440 IL2RBP14784 551 aa18.84■□□□□ 0.61
CCT4-201ENST00000394440 ZNF790Q6PG37 636 aa18.84■□□□□ 0.61
CCT4-201ENST00000394440 STRN4Q9NRL3 753 aa18.84■□□□□ 0.61
CCT4-201ENST00000394440 C8orf34Q49A92 452 aa18.83■□□□□ 0.61
CCT4-201ENST00000394440 ZCRB1Q8TBF4 217 aaKnown RBP18.83■□□□□ 0.61
CCT4-201ENST00000394440 UBR2Q8IWV8 1755 aa18.83■□□□□ 0.61
CCT4-201ENST00000394440 PAPPAQ13219 1627 aa18.83■□□□□ 0.61
CCT4-201ENST00000394440 EIF2S2P20042 333 aaKnown RBP18.83■□□□□ 0.6
CCT4-201ENST00000394440 FAM161AQ3B820 660 aa18.83■□□□□ 0.6
CCT4-201ENST00000394440 NFATC2IPQ8NCF5 419 aa18.83■□□□□ 0.6
CCT4-201ENST00000394440 MEIS3Q99687 375 aa18.83■□□□□ 0.6
CCT4-201ENST00000394440 PHAXQ9H814 394 aaKnown RBP18.83■□□□□ 0.6
CCT4-201ENST00000394440 CHPF2Q9P2E5 772 aa18.83■□□□□ 0.6
CCT4-201ENST00000394440 BTG4Q9NY30 223 aa18.82■□□□□ 0.6
CCT4-201ENST00000394440 TOGARAM1Q9Y4F4 1720 aa18.82■□□□□ 0.6
CCT4-201ENST00000394440 LAMB4A4D0S4 1761 aa18.82■□□□□ 0.6
CCT4-201ENST00000394440 EVA1CP58658 441 aa18.81■□□□□ 0.6
CCT4-201ENST00000394440 NKX1-1Q15270 411 aaPredicted RBP18.81■□□□□ 0.6
CCT4-201ENST00000394440 NRAPQ86VF7 1730 aa18.81■□□□□ 0.6
CCT4-201ENST00000394440 SLC4A10Q6U841 1118 aa18.81■□□□□ 0.6
CCT4-201ENST00000394440 GCC1Q96CN9 775 aa18.81■□□□□ 0.6
CCT4-201ENST00000394440 NUCB1Q02818 461 aa18.8■□□□□ 0.6
CCT4-201ENST00000394440 SLC39A6Q13433 755 aa18.8■□□□□ 0.6
CCT4-201ENST00000394440 DISP2A7MBM2 1401 aa18.8■□□□□ 0.6
CCT4-201ENST00000394440 PRAMEF22A3QJZ6 481 aa18.8■□□□□ 0.6
CCT4-201ENST00000394440 ANKRD44Q8N8A2 993 aa18.8■□□□□ 0.6
CCT4-201ENST00000394440 DBF4Q9UBU7 674 aaPredicted RBP18.8■□□□□ 0.6
CCT4-201ENST00000394440 RPAP2Q8IXW5 612 aaPredicted RBP18.79■□□□□ 0.6
CCT4-201ENST00000394440 JCADQ9P266 1359 aa18.79■□□□□ 0.6
CCT4-201ENST00000394440 CEP85Q6P2H3 762 aa18.79■□□□□ 0.6
CCT4-201ENST00000394440 ADCY9O60503 1353 aa18.77■□□□□ 0.6
CCT4-201ENST00000394440 ZNF496Q96IT1 587 aaPredicted RBP18.77■□□□□ 0.6
CCT4-201ENST00000394440 ANXA1P04083 346 aa18.76■□□□□ 0.59
CCT4-201ENST00000394440 CABP4P57796 275 aa18.76■□□□□ 0.59
CCT4-201ENST00000394440 ERVV-2B6SEH9 535 aa18.76■□□□□ 0.59
CCT4-201ENST00000394440 PROSER3Q2NL68 480 aa18.76■□□□□ 0.59
CCT4-201ENST00000394440 CHD1LQ86WJ1 897 aa18.75■□□□□ 0.59
CCT4-201ENST00000394440 DCTPP1Q9H773 170 aa18.75■□□□□ 0.59
CCT4-201ENST00000394440 NWD2Q9ULI1 1742 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms