RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 FLIIQ13045 1269 aa22.64■■□□□ 1.21
CLDND1-204ENST00000394185 KDM6AO15550 1401 aaPredicted RBP22.64■■□□□ 1.21
CLDND1-204ENST00000394185 PHKG2P15735 406 aa22.63■■□□□ 1.21
CLDND1-204ENST00000394185 EIF2S2P20042 333 aaKnown RBP22.63■■□□□ 1.21
CLDND1-204ENST00000394185 SLC4A10Q6U841 1118 aa22.63■■□□□ 1.21
CLDND1-204ENST00000394185 SMC5Q8IY18 1101 aa22.63■■□□□ 1.21
CLDND1-204ENST00000394185 COL5A2P05997 1499 aaPredicted RBP22.63■■□□□ 1.21
CLDND1-204ENST00000394185 OVOS2A0A0G2JMS6 1433 aa22.62■■□□□ 1.21
CLDND1-204ENST00000394185 CYP27B1O15528 508 aa22.62■■□□□ 1.21
CLDND1-204ENST00000394185 WDR17Q8IZU2 1322 aa22.62■■□□□ 1.21
CLDND1-204ENST00000394185 SPG7Q9UQ90 795 aa22.62■■□□□ 1.21
CLDND1-204ENST00000394185 ADAMTS7Q9UKP4 1686 aa22.61■■□□□ 1.21
CLDND1-204ENST00000394185 MSH5O43196 834 aa22.61■■□□□ 1.21
CLDND1-204ENST00000394185 FKBP5Q13451 457 aaPredicted RBP22.61■■□□□ 1.21
CLDND1-204ENST00000394185 TOM1L2Q6ZVM7 507 aa22.61■■□□□ 1.21
CLDND1-204ENST00000394185 MEIS3Q99687 375 aa22.61■■□□□ 1.21
CLDND1-204ENST00000394185 PHAXQ9H814 394 aaKnown RBP22.61■■□□□ 1.21
CLDND1-204ENST00000394185 PRAMEF22A3QJZ6 481 aa22.6■■□□□ 1.21
CLDND1-204ENST00000394185 FAM161AQ3B820 660 aa22.6■■□□□ 1.21
CLDND1-204ENST00000394185 ROBO1Q9Y6N7 1651 aa22.6■■□□□ 1.21
CLDND1-204ENST00000394185 CHMP4BQ9H444 224 aaKnown RBP22.6■■□□□ 1.21
CLDND1-204ENST00000394185 STRN4Q9NRL3 753 aa22.6■■□□□ 1.21
CLDND1-204ENST00000394185 SOS1Q07889 1333 aaPredicted RBP22.6■■□□□ 1.21
CLDND1-204ENST00000394185 LTBP4Q8N2S1 1624 aa22.6■■□□□ 1.21
CLDND1-204ENST00000394185 NPM2Q86SE8 214 aaKnown RBP22.59■■□□□ 1.21
CLDND1-204ENST00000394185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.59■■□□□ 1.21
CLDND1-204ENST00000394185 SIPA1L3O60292 1781 aaPredicted RBP22.59■■□□□ 1.21
CLDND1-204ENST00000394185 CHPF2Q9P2E5 772 aa22.59■■□□□ 1.21
CLDND1-204ENST00000394185 ANXA1P04083 346 aa22.58■■□□□ 1.21
CLDND1-204ENST00000394185 SLC39A6Q13433 755 aa22.58■■□□□ 1.21
CLDND1-204ENST00000394185 IFNL2Q8IZJ0 200 aa22.58■■□□□ 1.21
CLDND1-204ENST00000394185 LARP1Q6PKG0 1096 aaKnown RBP22.57■■□□□ 1.2
CLDND1-204ENST00000394185 NFATC2IPQ8NCF5 419 aa22.57■■□□□ 1.2
CLDND1-204ENST00000394185 SLC52A2Q9HAB3 445 aa22.57■■□□□ 1.2
CLDND1-204ENST00000394185 ATP10DQ9P241 1426 aa22.56■■□□□ 1.2
CLDND1-204ENST00000394185 GIGYF1O75420 1035 aaPredicted RBP22.56■■□□□ 1.2
CLDND1-204ENST00000394185 PKD1L3Q7Z443 1732 aa22.56■■□□□ 1.2
CLDND1-204ENST00000394185 SCN11AQ9UI33 1791 aa22.55■■□□□ 1.2
CLDND1-204ENST00000394185 HEG1Q9ULI3 1381 aa22.55■■□□□ 1.2
CLDND1-204ENST00000394185 HOXB7P09629 217 aa22.55■■□□□ 1.2
CLDND1-204ENST00000394185 NUCB1Q02818 461 aa22.54■■□□□ 1.2
CLDND1-204ENST00000394185 LNPKQ9C0E8 428 aa22.54■■□□□ 1.2
CLDND1-204ENST00000394185 CCT4P50991 539 aaKnown RBP22.53■■□□□ 1.2
CLDND1-204ENST00000394185 ZNF790Q6PG37 636 aa22.53■■□□□ 1.2
CLDND1-204ENST00000394185 USP35Q9P2H5 1018 aa22.53■■□□□ 1.2
CLDND1-204ENST00000394185 PROSER3Q2NL68 480 aa22.52■■□□□ 1.2
CLDND1-204ENST00000394185 DCAF5Q96JK2 942 aa22.52■■□□□ 1.2
CLDND1-204ENST00000394185 EVA1CP58658 441 aa22.52■■□□□ 1.2
CLDND1-204ENST00000394185 CEP85Q6P2H3 762 aa22.52■■□□□ 1.2
CLDND1-204ENST00000394185 CARD10Q9BWT7 1032 aa22.52■■□□□ 1.2
CLDND1-204ENST00000394185 BTG4Q9NY30 223 aa22.51■■□□□ 1.19
CLDND1-204ENST00000394185 CACNA1FO60840 1977 aa22.51■■□□□ 1.19
CLDND1-204ENST00000394185 CHD1LQ86WJ1 897 aa22.5■■□□□ 1.19
CLDND1-204ENST00000394185 ANP32AP39687 249 aaKnown RBP22.5■■□□□ 1.19
CLDND1-204ENST00000394185 ANKRD45Q5TZF3 282 aa22.5■■□□□ 1.19
CLDND1-204ENST00000394185 ANKRD44Q8N8A2 993 aa22.5■■□□□ 1.19
CLDND1-204ENST00000394185 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
CLDND1-204ENST00000394185 PLEKHG2Q9H7P9 1386 aa22.49■■□□□ 1.19
CLDND1-204ENST00000394185 GCC1Q96CN9 775 aa22.49■■□□□ 1.19
CLDND1-204ENST00000394185 AHDC1Q5TGY3 1603 aaPredicted RBP22.49■■□□□ 1.19
CLDND1-204ENST00000394185 SEC24BO95487 1268 aa22.48■■□□□ 1.19
CLDND1-204ENST00000394185 IL2RBP14784 551 aa22.48■■□□□ 1.19
CLDND1-204ENST00000394185 PARP4Q9UKK3 1724 aaKnown RBP22.48■■□□□ 1.19
CLDND1-204ENST00000394185 MRC1P22897 1456 aa22.48■■□□□ 1.19
CLDND1-204ENST00000394185 ZNF496Q96IT1 587 aaPredicted RBP22.48■■□□□ 1.19
CLDND1-204ENST00000394185 PI4KAP2A4QPH2 592 aa22.47■■□□□ 1.19
CLDND1-204ENST00000394185 PI4KAP1Q8N8J0 262 aa22.47■■□□□ 1.19
CLDND1-204ENST00000394185 DBF4Q9UBU7 674 aaPredicted RBP22.46■■□□□ 1.19
CLDND1-204ENST00000394185 PCDH11XQ9BZA7 1347 aa22.46■■□□□ 1.19
CLDND1-204ENST00000394185 PCDH11YQ9BZA8 1340 aa22.46■■□□□ 1.19
CLDND1-204ENST00000394185 DDX54Q8TDD1 881 aaKnown RBP22.46■■□□□ 1.19
CLDND1-204ENST00000394185 CABP4P57796 275 aa22.45■■□□□ 1.18
CLDND1-204ENST00000394185 RPAP2Q8IXW5 612 aaPredicted RBP22.45■■□□□ 1.18
CLDND1-204ENST00000394185 DCTPP1Q9H773 170 aa22.45■■□□□ 1.18
CLDND1-204ENST00000394185 ADCY9O60503 1353 aa22.45■■□□□ 1.18
CLDND1-204ENST00000394185 C5P01031 1676 aa22.45■■□□□ 1.18
CLDND1-204ENST00000394185 HSP90AB1P08238 724 aaKnown RBP22.45■■□□□ 1.18
CLDND1-204ENST00000394185 BCL11AQ9H165 835 aa22.45■■□□□ 1.18
CLDND1-204ENST00000394185 USP44Q9H0E7 712 aa22.44■■□□□ 1.18
CLDND1-204ENST00000394185 PXDNLA1KZ92 1463 aa22.44■■□□□ 1.18
CLDND1-204ENST00000394185 PDIA6Q15084 440 aa22.43■■□□□ 1.18
CLDND1-204ENST00000394185 PIP4K2BP78356 416 aa22.43■■□□□ 1.18
CLDND1-204ENST00000394185 COL16A1Q07092 1604 aaPredicted RBP22.43■■□□□ 1.18
CLDND1-204ENST00000394185 SHANK3Q9BYB0 1731 aa22.43■■□□□ 1.18
CLDND1-204ENST00000394185 GNAI2P04899 355 aa22.42■■□□□ 1.18
CLDND1-204ENST00000394185 DNAAF4Q8WXU2 420 aa22.42■■□□□ 1.18
CLDND1-204ENST00000394185 IPO9Q96P70 1041 aaKnown RBP22.42■■□□□ 1.18
CLDND1-204ENST00000394185 N4BP2Q86UW6 1770 aaPredicted RBP22.41■■□□□ 1.18
CLDND1-204ENST00000394185 PIP4K2AP48426 406 aaPredicted RBP22.41■■□□□ 1.18
CLDND1-204ENST00000394185 BEND3Q5T5X7 828 aa22.41■■□□□ 1.18
CLDND1-204ENST00000394185 TTC5Q8N0Z6 440 aa22.41■■□□□ 1.18
CLDND1-204ENST00000394185 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
CLDND1-204ENST00000394185 COL22A1Q8NFW1 1626 aaPredicted RBP22.41■■□□□ 1.18
CLDND1-204ENST00000394185 APBB1O00213 710 aa22.4■■□□□ 1.18
CLDND1-204ENST00000394185 CHMP4AQ9BY43 222 aa22.4■■□□□ 1.18
CLDND1-204ENST00000394185 SRCIN1Q9C0H9 1055 aa22.4■■□□□ 1.18
CLDND1-204ENST00000394185 LRRFIP2Q9Y608 721 aaKnown RBP22.4■■□□□ 1.18
CLDND1-204ENST00000394185 PNMA6EA0A0J9YXQ4 647 aa22.39■■□□□ 1.18
CLDND1-204ENST00000394185 GNAI3P08754 354 aa22.39■■□□□ 1.18
CLDND1-204ENST00000394185 AIMP1Q12904 312 aaKnown RBP22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms