RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 AHDC1Q5TGY3 1603 aaPredicted RBP29.23■■■□□ 2.27
RARA-204ENST00000394089 ABCC4O15439 1325 aa29.22■■■□□ 2.27
RARA-204ENST00000394089 RNMTO43148 476 aaKnown RBP29.22■■■□□ 2.27
RARA-204ENST00000394089 PCDHB15Q9Y5E8 787 aa29.21■■■□□ 2.27
RARA-204ENST00000394089 IGHDP01880 384 aa29.21■■■□□ 2.27
RARA-204ENST00000394089 ADAMTS7Q9UKP4 1686 aa29.21■■■□□ 2.27
RARA-204ENST00000394089 MEGF6O75095 1541 aa29.21■■■□□ 2.27
RARA-204ENST00000394089 MPRIPQ6WCQ1 1025 aa29.2■■■□□ 2.27
RARA-204ENST00000394089 WDR17Q8IZU2 1322 aa29.2■■■□□ 2.26
RARA-204ENST00000394089 SPG7Q9UQ90 795 aa29.19■■■□□ 2.26
RARA-204ENST00000394089 TEFQ10587 303 aa29.18■■■□□ 2.26
RARA-204ENST00000394089 COL5A2P05997 1499 aaPredicted RBP29.18■■■□□ 2.26
RARA-204ENST00000394089 KDM3BQ7LBC6 1761 aa29.18■■■□□ 2.26
RARA-204ENST00000394089 CHMP4BQ9H444 224 aaKnown RBP29.18■■■□□ 2.26
RARA-204ENST00000394089 PTPRCP08575 1304 aa29.17■■■□□ 2.26
RARA-204ENST00000394089 ZBTB40Q9NUA8 1239 aa29.17■■■□□ 2.26
RARA-204ENST00000394089 VIRMAQ69YN4 1812 aaKnown RBP29.15■■■□□ 2.26
RARA-204ENST00000394089 RWDD1Q9H446 243 aaPredicted RBP29.15■■■□□ 2.26
RARA-204ENST00000394089 PKD1L3Q7Z443 1732 aa29.14■■■□□ 2.26
RARA-204ENST00000394089 SLC4A2P04920 1241 aa29.13■■■□□ 2.25
RARA-204ENST00000394089 CCDC30Q5VVM6 783 aa29.13■■■□□ 2.25
RARA-204ENST00000394089 RGS12O14924 1447 aa29.13■■■□□ 2.25
RARA-204ENST00000394089 BTBD11A6QL63 1104 aa29.13■■■□□ 2.25
RARA-204ENST00000394089 PHKG2P15735 406 aa29.13■■■□□ 2.25
RARA-204ENST00000394089 EIF4A1P60842 406 aaKnown RBP29.13■■■□□ 2.25
RARA-204ENST00000394089 COL22A1Q8NFW1 1626 aaPredicted RBP29.12■■■□□ 2.25
RARA-204ENST00000394089 HOXB7P09629 217 aa29.12■■■□□ 2.25
RARA-204ENST00000394089 ZBTB7BO15156 539 aaPredicted RBP29.11■■■□□ 2.25
RARA-204ENST00000394089 FAM161AQ3B820 660 aa29.11■■■□□ 2.25
RARA-204ENST00000394089 STK31Q9BXU1 1019 aa29.11■■■□□ 2.25
RARA-204ENST00000394089 SIPA1L3O60292 1781 aaPredicted RBP29.11■■■□□ 2.25
RARA-204ENST00000394089 TOM1L2Q6ZVM7 507 aa29.11■■■□□ 2.25
RARA-204ENST00000394089 IFNL2Q8IZJ0 200 aa29.11■■■□□ 2.25
RARA-204ENST00000394089 INTS3Q68E01 1043 aaKnown RBP29.1■■■□□ 2.25
RARA-204ENST00000394089 CARD10Q9BWT7 1032 aa29.1■■■□□ 2.25
RARA-204ENST00000394089 DAXXQ9UER7 740 aaPredicted RBP29.1■■■□□ 2.25
RARA-204ENST00000394089 HDAC1Q13547 482 aaPredicted RBP29.09■■■□□ 2.25
RARA-204ENST00000394089 CHMP4AQ9BY43 222 aa29.09■■■□□ 2.25
RARA-204ENST00000394089 PARP4Q9UKK3 1724 aaKnown RBP29.09■■■□□ 2.25
RARA-204ENST00000394089 KDM6AO15550 1401 aaPredicted RBP29.08■■■□□ 2.25
RARA-204ENST00000394089 SCN11AQ9UI33 1791 aa29.08■■■□□ 2.25
RARA-204ENST00000394089 C8orf34Q49A92 452 aa29.08■■■□□ 2.25
RARA-204ENST00000394089 SKAP1Q86WV1 359 aa29.06■■■□□ 2.24
RARA-204ENST00000394089 KCNQ3O43525 872 aa29.05■■■□□ 2.24
RARA-204ENST00000394089 HSP90AB1P08238 724 aaKnown RBP29.05■■■□□ 2.24
RARA-204ENST00000394089 EVA1CP58658 441 aa29.04■■■□□ 2.24
RARA-204ENST00000394089 G2E3Q7L622 706 aa29.04■■■□□ 2.24
RARA-204ENST00000394089 CACNA1FO60840 1977 aa29.04■■■□□ 2.24
RARA-204ENST00000394089 CYP27B1O15528 508 aa29.04■■■□□ 2.24
RARA-204ENST00000394089 HDGFL1Q5TGJ6 251 aa29.04■■■□□ 2.24
RARA-204ENST00000394089 DCAF5Q96JK2 942 aa29.04■■■□□ 2.24
RARA-204ENST00000394089 EIF5BO60841 1220 aaKnown RBP29.03■■■□□ 2.24
RARA-204ENST00000394089 SLC52A2Q9HAB3 445 aa29.03■■■□□ 2.24
RARA-204ENST00000394089 COL14A1Q05707 1796 aaKnown RBP29.03■■■□□ 2.24
RARA-204ENST00000394089 HEG1Q9ULI3 1381 aa29.03■■■□□ 2.24
RARA-204ENST00000394089 MRC1P22897 1456 aa29.03■■■□□ 2.24
RARA-204ENST00000394089 LARP1Q6PKG0 1096 aaKnown RBP29.02■■■□□ 2.24
RARA-204ENST00000394089 STRN4Q9NRL3 753 aa29.01■■■□□ 2.24
RARA-204ENST00000394089 COL16A1Q07092 1604 aaPredicted RBP29■■■□□ 2.23
RARA-204ENST00000394089 TOM1O60784 492 aa29■■■□□ 2.23
RARA-204ENST00000394089 FRAT2O75474 233 aaPredicted RBP29■■■□□ 2.23
RARA-204ENST00000394089 IL2RBP14784 551 aa29■■■□□ 2.23
RARA-204ENST00000394089 FLIIQ13045 1269 aa29■■■□□ 2.23
RARA-204ENST00000394089 PHLPP1O60346 1717 aa29■■■□□ 2.23
RARA-204ENST00000394089 ZCRB1Q8TBF4 217 aaKnown RBP28.99■■■□□ 2.23
RARA-204ENST00000394089 NECTIN2Q92692 538 aa28.99■■■□□ 2.23
RARA-204ENST00000394089 PCDH11XQ9BZA7 1347 aa28.98■■■□□ 2.23
RARA-204ENST00000394089 PCDH11YQ9BZA8 1340 aa28.98■■■□□ 2.23
RARA-204ENST00000394089 SLC4A3P48751 1232 aa28.98■■■□□ 2.23
RARA-204ENST00000394089 BTG4Q9NY30 223 aa28.97■■■□□ 2.23
RARA-204ENST00000394089 GIGYF1O75420 1035 aaPredicted RBP28.96■■■□□ 2.23
RARA-204ENST00000394089 CCT4P50991 539 aaKnown RBP28.96■■■□□ 2.23
RARA-204ENST00000394089 SMC5Q8IY18 1101 aa28.95■■■□□ 2.23
RARA-204ENST00000394089 EIF2S2P20042 333 aaKnown RBP28.94■■■□□ 2.22
RARA-204ENST00000394089 NFATC2IPQ8NCF5 419 aa28.94■■■□□ 2.22
RARA-204ENST00000394089 PDZRN3Q9UPQ7 1066 aa28.94■■■□□ 2.22
RARA-204ENST00000394089 RGS3P49796 1198 aa28.94■■■□□ 2.22
RARA-204ENST00000394089 FKBP5Q13451 457 aaPredicted RBP28.94■■■□□ 2.22
RARA-204ENST00000394089 ZNF790Q6PG37 636 aa28.94■■■□□ 2.22
RARA-204ENST00000394089 NKX1-1Q15270 411 aaPredicted RBP28.93■■■□□ 2.22
RARA-204ENST00000394089 PXDNLA1KZ92 1463 aa28.92■■■□□ 2.22
RARA-204ENST00000394089 F6X3S4 739 aa28.92■■■□□ 2.22
RARA-204ENST00000394089 C1orf115Q9H7X2 142 aa28.91■■■□□ 2.22
RARA-204ENST00000394089 CHPF2Q9P2E5 772 aa28.91■■■□□ 2.22
RARA-204ENST00000394089 SHANK3Q9BYB0 1731 aa28.9■■■□□ 2.22
RARA-204ENST00000394089 CABP4P57796 275 aa28.89■■■□□ 2.22
RARA-204ENST00000394089 SLC4A10Q6U841 1118 aa28.89■■■□□ 2.22
RARA-204ENST00000394089 DBF4Q9UBU7 674 aaPredicted RBP28.89■■■□□ 2.21
RARA-204ENST00000394089 N4BP2Q86UW6 1770 aaPredicted RBP28.89■■■□□ 2.21
RARA-204ENST00000394089 SLC39A6Q13433 755 aa28.88■■■□□ 2.21
RARA-204ENST00000394089 PHAXQ9H814 394 aaKnown RBP28.88■■■□□ 2.21
RARA-204ENST00000394089 ERVV-2B6SEH9 535 aa28.87■■■□□ 2.21
RARA-204ENST00000394089 PIP4K2BP78356 416 aa28.87■■■□□ 2.21
RARA-204ENST00000394089 L1TD1Q5T7N2 865 aaKnown RBP28.87■■■□□ 2.21
RARA-204ENST00000394089 SIRT2Q8IXJ6 389 aa28.87■■■□□ 2.21
RARA-204ENST00000394089 GCC1Q96CN9 775 aa28.86■■■□□ 2.21
RARA-204ENST00000394089 MEIS3Q99687 375 aa28.86■■■□□ 2.21
RARA-204ENST00000394089 DISP2A7MBM2 1401 aa28.85■■■□□ 2.21
RARA-204ENST00000394089 ATP10DQ9P241 1426 aa28.84■■■□□ 2.21
RARA-204ENST00000394089 RPAP2Q8IXW5 612 aaPredicted RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms