RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 CACNA1FO60840 1977 aa28.02■■■□□ 2.08
HMGA2-203ENST00000393578 CHMP4AQ9BY43 222 aa28.02■■■□□ 2.08
HMGA2-203ENST00000393578 PDZRN3Q9UPQ7 1066 aa28.01■■■□□ 2.07
HMGA2-203ENST00000393578 G2E3Q7L622 706 aa28■■■□□ 2.07
HMGA2-203ENST00000393578 SMC5Q8IY18 1101 aa28■■■□□ 2.07
HMGA2-203ENST00000393578 WDR17Q8IZU2 1322 aa28■■■□□ 2.07
HMGA2-203ENST00000393578 SIPA1L3O60292 1781 aaPredicted RBP27.98■■■□□ 2.07
HMGA2-203ENST00000393578 PHKG2P15735 406 aa27.98■■■□□ 2.07
HMGA2-203ENST00000393578 HDGFL1Q5TGJ6 251 aa27.98■■■□□ 2.07
HMGA2-203ENST00000393578 COL5A2P05997 1499 aaPredicted RBP27.97■■■□□ 2.07
HMGA2-203ENST00000393578 ROBO1Q9Y6N7 1651 aa27.97■■■□□ 2.07
HMGA2-203ENST00000393578 PKD1L3Q7Z443 1732 aa27.97■■■□□ 2.07
HMGA2-203ENST00000393578 FLIIQ13045 1269 aa27.97■■■□□ 2.07
HMGA2-203ENST00000393578 FAM161AQ3B820 660 aa27.97■■■□□ 2.07
HMGA2-203ENST00000393578 IFNL2Q8IZJ0 200 aa27.97■■■□□ 2.07
HMGA2-203ENST00000393578 KCNQ3O43525 872 aa27.95■■■□□ 2.07
HMGA2-203ENST00000393578 NECTIN2Q92692 538 aa27.95■■■□□ 2.07
HMGA2-203ENST00000393578 CCT4P50991 539 aaKnown RBP27.95■■■□□ 2.06
HMGA2-203ENST00000393578 SCN11AQ9UI33 1791 aa27.94■■■□□ 2.06
HMGA2-203ENST00000393578 C1orf115Q9H7X2 142 aa27.94■■■□□ 2.06
HMGA2-203ENST00000393578 TOM1L2Q6ZVM7 507 aa27.93■■■□□ 2.06
HMGA2-203ENST00000393578 KDM6AO15550 1401 aaPredicted RBP27.93■■■□□ 2.06
HMGA2-203ENST00000393578 FKBP5Q13451 457 aaPredicted RBP27.92■■■□□ 2.06
HMGA2-203ENST00000393578 HEG1Q9ULI3 1381 aa27.92■■■□□ 2.06
HMGA2-203ENST00000393578 AHDC1Q5TGY3 1603 aaPredicted RBP27.91■■■□□ 2.06
HMGA2-203ENST00000393578 C8orf34Q49A92 452 aa27.91■■■□□ 2.06
HMGA2-203ENST00000393578 F6X3S4 739 aa27.91■■■□□ 2.06
HMGA2-203ENST00000393578 DCAF5Q96JK2 942 aa27.91■■■□□ 2.06
HMGA2-203ENST00000393578 SLC52A2Q9HAB3 445 aa27.91■■■□□ 2.06
HMGA2-203ENST00000393578 CYP27B1O15528 508 aa27.9■■■□□ 2.06
HMGA2-203ENST00000393578 HSP90AB1P08238 724 aaKnown RBP27.9■■■□□ 2.06
HMGA2-203ENST00000393578 SIRT2Q8IXJ6 389 aa27.9■■■□□ 2.06
HMGA2-203ENST00000393578 GCC1Q96CN9 775 aa27.9■■■□□ 2.06
HMGA2-203ENST00000393578 PARP4Q9UKK3 1724 aaKnown RBP27.9■■■□□ 2.06
HMGA2-203ENST00000393578 SLC4A10Q6U841 1118 aa27.9■■■□□ 2.06
HMGA2-203ENST00000393578 CARD10Q9BWT7 1032 aa27.9■■■□□ 2.06
HMGA2-203ENST00000393578 EIF2S2P20042 333 aaKnown RBP27.89■■■□□ 2.06
HMGA2-203ENST00000393578 GIGYF1O75420 1035 aaPredicted RBP27.88■■■□□ 2.05
HMGA2-203ENST00000393578 NUCB1Q02818 461 aa27.88■■■□□ 2.05
HMGA2-203ENST00000393578 ANP32AP39687 249 aaKnown RBP27.87■■■□□ 2.05
HMGA2-203ENST00000393578 MRC1P22897 1456 aa27.87■■■□□ 2.05
HMGA2-203ENST00000393578 MEIS3Q99687 375 aa27.86■■■□□ 2.05
HMGA2-203ENST00000393578 PXDNLA1KZ92 1463 aa27.86■■■□□ 2.05
HMGA2-203ENST00000393578 EVA1CP58658 441 aa27.86■■■□□ 2.05
HMGA2-203ENST00000393578 RPAP2Q8IXW5 612 aaPredicted RBP27.86■■■□□ 2.05
HMGA2-203ENST00000393578 CHPF2Q9P2E5 772 aa27.85■■■□□ 2.05
HMGA2-203ENST00000393578 ZNF790Q6PG37 636 aa27.84■■■□□ 2.05
HMGA2-203ENST00000393578 ANKRD44Q8N8A2 993 aa27.84■■■□□ 2.05
HMGA2-203ENST00000393578 NFATC2IPQ8NCF5 419 aa27.84■■■□□ 2.05
HMGA2-203ENST00000393578 ATP10DQ9P241 1426 aa27.84■■■□□ 2.05
HMGA2-203ENST00000393578 N4BP2Q86UW6 1770 aaPredicted RBP27.84■■■□□ 2.05
HMGA2-203ENST00000393578 ZCRB1Q8TBF4 217 aaKnown RBP27.84■■■□□ 2.05
HMGA2-203ENST00000393578 PHAXQ9H814 394 aaKnown RBP27.84■■■□□ 2.05
HMGA2-203ENST00000393578 LARP1Q6PKG0 1096 aaKnown RBP27.83■■■□□ 2.05
HMGA2-203ENST00000393578 STRN4Q9NRL3 753 aa27.83■■■□□ 2.05
HMGA2-203ENST00000393578 DBF4Q9UBU7 674 aaPredicted RBP27.83■■■□□ 2.05
HMGA2-203ENST00000393578 PCDH11XQ9BZA7 1347 aa27.83■■■□□ 2.05
HMGA2-203ENST00000393578 PCDH11YQ9BZA8 1340 aa27.83■■■□□ 2.05
HMGA2-203ENST00000393578 IL2RBP14784 551 aa27.82■■■□□ 2.04
HMGA2-203ENST00000393578 COL22A1Q8NFW1 1626 aaPredicted RBP27.82■■■□□ 2.04
HMGA2-203ENST00000393578 CHD1LQ86WJ1 897 aa27.82■■■□□ 2.04
HMGA2-203ENST00000393578 CEP85Q6P2H3 762 aa27.8■■■□□ 2.04
HMGA2-203ENST00000393578 GNAI3P08754 354 aa27.79■■■□□ 2.04
HMGA2-203ENST00000393578 COL14A1Q05707 1796 aaKnown RBP27.78■■■□□ 2.04
HMGA2-203ENST00000393578 SLC39A6Q13433 755 aa27.78■■■□□ 2.04
HMGA2-203ENST00000393578 DCTPP1Q9H773 170 aa27.78■■■□□ 2.04
HMGA2-203ENST00000393578 ANKRD45Q5TZF3 282 aa27.77■■■□□ 2.04
HMGA2-203ENST00000393578 LNPKQ9C0E8 428 aa27.77■■■□□ 2.04
HMGA2-203ENST00000393578 BTG4Q9NY30 223 aa27.77■■■□□ 2.04
HMGA2-203ENST00000393578 CABP4P57796 275 aa27.77■■■□□ 2.04
HMGA2-203ENST00000393578 GNAI2P04899 355 aa27.76■■■□□ 2.03
HMGA2-203ENST00000393578 NKX1-1Q15270 411 aaPredicted RBP27.75■■■□□ 2.03
HMGA2-203ENST00000393578 PHLPP1O60346 1717 aa27.75■■■□□ 2.03
HMGA2-203ENST00000393578 PRAMEF22A3QJZ6 481 aa27.75■■■□□ 2.03
HMGA2-203ENST00000393578 NPM2Q86SE8 214 aaKnown RBP27.75■■■□□ 2.03
HMGA2-203ENST00000393578 TTC5Q8N0Z6 440 aa27.75■■■□□ 2.03
HMGA2-203ENST00000393578 HYPKQ9NX55 129 aa27.75■■■□□ 2.03
HMGA2-203ENST00000393578 HMMRO75330 724 aa27.73■■■□□ 2.03
HMGA2-203ENST00000393578 COL16A1Q07092 1604 aaPredicted RBP27.73■■■□□ 2.03
HMGA2-203ENST00000393578 ERVV-2B6SEH9 535 aa27.73■■■□□ 2.03
HMGA2-203ENST00000393578 ANXA1P04083 346 aa27.73■■■□□ 2.03
HMGA2-203ENST00000393578 DNAAF4Q8WXU2 420 aa27.73■■■□□ 2.03
HMGA2-203ENST00000393578 ZNF496Q96IT1 587 aaPredicted RBP27.73■■■□□ 2.03
HMGA2-203ENST00000393578 PI4KAP2A4QPH2 592 aa27.72■■■□□ 2.03
HMGA2-203ENST00000393578 MSH5O43196 834 aa27.72■■■□□ 2.03
HMGA2-203ENST00000393578 PI4KAP1Q8N8J0 262 aa27.72■■■□□ 2.03
HMGA2-203ENST00000393578 IPO9Q96P70 1041 aaKnown RBP27.72■■■□□ 2.03
HMGA2-203ENST00000393578 SRCIN1Q9C0H9 1055 aa27.72■■■□□ 2.03
HMGA2-203ENST00000393578 DDX21Q9NR30 783 aaKnown RBP eCLIP27.72■■■□□ 2.03
HMGA2-203ENST00000393578 SHANK3Q9BYB0 1731 aa27.71■■■□□ 2.03
HMGA2-203ENST00000393578 PROSER3Q2NL68 480 aa27.71■■■□□ 2.03
HMGA2-203ENST00000393578 FMNL2Q96PY5 1086 aa27.71■■■□□ 2.03
HMGA2-203ENST00000393578 USP44Q9H0E7 712 aa27.71■■■□□ 2.03
HMGA2-203ENST00000393578 C5P01031 1676 aa27.71■■■□□ 2.03
HMGA2-203ENST00000393578 ADCY9O60503 1353 aa27.7■■■□□ 2.03
HMGA2-203ENST00000393578 SNRPA1P09661 255 aaKnown RBP27.7■■■□□ 2.03
HMGA2-203ENST00000393578 BEND3Q5T5X7 828 aa27.69■■■□□ 2.02
HMGA2-203ENST00000393578 TOM1O60784 492 aa27.68■■■□□ 2.02
HMGA2-203ENST00000393578 PDIA6Q15084 440 aa27.68■■■□□ 2.02
HMGA2-203ENST00000393578 DDX54Q8TDD1 881 aaKnown RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms