RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 TRIM4Q9C037 500 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 KIF5CO60282 957 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 WBP4O75554 376 aaKnown RBP3.8□□□□□ -1.8
PHF3-202ENST00000393387 ME1P48163 572 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 ZNF280CQ8ND82 737 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 KIF18AQ8NI77 898 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 PPP1R14CQ8TAE6 165 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 ERICH2A1L162 156 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 REC8O95072 547 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 TMF1P82094 1093 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 FKBP15Q5T1M5 1219 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 MIER3Q7Z3K6 550 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.8□□□□□ -1.8
PHF3-202ENST00000393387 UPF3BQ9BZI7 483 aaKnown RBP3.8□□□□□ -1.8
PHF3-202ENST00000393387 ANAPC4Q9UJX5 808 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 DYNC1I1O14576 645 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 CBFA2T2O43439 604 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 RPSAP08865 295 aaKnown RBP3.8□□□□□ -1.8
PHF3-202ENST00000393387 ARL1P40616 181 aaPredicted RBP3.8□□□□□ -1.8
PHF3-202ENST00000393387 IGBP1P78318 339 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 INTS3Q68E01 1043 aaKnown RBP3.8□□□□□ -1.8
PHF3-202ENST00000393387 KLHL10Q6JEL2 608 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 KSR1Q8IVT5 923 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 STK26Q9P289 416 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 IFIT2P09913 472 aaKnown RBP3.8□□□□□ -1.8
PHF3-202ENST00000393387 FERP16591 822 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 SKAP1Q86WV1 359 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 SMAP1Q8IYB5 467 aaPredicted RBP3.8□□□□□ -1.8
PHF3-202ENST00000393387 MICAL1Q8TDZ2 1067 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 DCAF11Q8TEB1 546 aa3.8□□□□□ -1.8
PHF3-202ENST00000393387 G3BP2Q9UN86 482 aaKnown RBP3.8□□□□□ -1.8
PHF3-202ENST00000393387 CNGA1P29973 690 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 CPLX2Q6PUV4 134 aaKnown RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 LMNTD2Q8IXW0 634 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 SEC62Q99442 399 aaKnown RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 MBD3O95983 291 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 CSB-PGBD3P0DP91 1061 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 NEK4P51957 841 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 SATB1Q01826 763 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 NBPF6Q5VWK0 638 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 NBPF4Q96M43 638 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 UBAP1Q9NZ09 502 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 CCDC180Q9P1Z9 1646 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 WASHC2AQ641Q2 1341 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 MAP3K7CLP57077 242 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 AAMPQ13685 434 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 WHAMMP3Q1A5X7 153 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 ARMC9Q7Z3E5 817 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 PANK1Q8TE04 598 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 SMC6Q96SB8 1091 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 NUB1Q9Y5A7 615 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 TMC6Q7Z403 805 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 CAPZA3Q96KX2 299 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 NUP62CLQ9H1M0 184 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 MRPL46Q9H2W6 279 aaKnown RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 FAF1Q9UNN5 650 aaPredicted RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 STK38LQ9Y2H1 464 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 SNW1Q13573 536 aaKnown RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 WASHC4Q2M389 1173 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 MAP7D1Q3KQU3 841 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 NBPF11Q86T75 865 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 CCDC63Q8NA47 563 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 CCDC12Q8WUD4 166 aaPredicted RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 ZNF622Q969S3 477 aaKnown RBP eCLIP3.79□□□□□ -1.89e-7■□□□□ 10.2
PHF3-202ENST00000393387 EPSTI1Q96J88 318 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 GBP5Q96PP8 586 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 C1orf115Q9H7X2 142 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 CWC22Q9HCG8 908 aaKnown RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.79□□□□□ -1.8
PHF3-202ENST00000393387 LUC7L2Q9Y383 392 aaKnown RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 SPECC1L-ADORA2AF8WAN1 911 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 PPP1R12BO60237 982 aaPredicted RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 TACC1O75410 805 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 EIF2S2P20042 333 aaKnown RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 MX2P20592 715 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 ATP11AP98196 1134 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 TRDNQ13061 729 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 LARP1Q6PKG0 1096 aaKnown RBP3.79□□□□□ -1.8
PHF3-202ENST00000393387 ZNF365Q70YC5 407 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 TBC1D31Q96DN5 1066 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 PALMDQ9NP74 551 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 MYO15BQ96JP2 1530 aa3.79□□□□□ -1.8
PHF3-202ENST00000393387 EEA1Q15075 1411 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 EIF4E1BA6NMX2 242 aaKnown RBP3.78□□□□□ -1.8
PHF3-202ENST00000393387 KIF2AO00139 706 aaPredicted RBP3.78□□□□□ -1.8
PHF3-202ENST00000393387 SESN3P58005 492 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 STMN2Q93045 179 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 ODF2LQ9ULJ1 636 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 RHOXF2BP0C7M4 288 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 SLC9A5Q14940 896 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 SPA17Q15506 151 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 NUDCD3Q8IVD9 361 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 CKAP2LQ8IYA6 745 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 RUFY2Q8WXA3 655 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 MRRFQ96E11 262 aaKnown RBP3.78□□□□□ -1.8
PHF3-202ENST00000393387 SPATA17Q96L03 361 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 RHOXF2Q9BQY4 288 aa3.78□□□□□ -1.8
PHF3-202ENST00000393387 BRMS1Q9HCU9 246 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms