RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 MBD3O95983 291 aa16.99■□□□□ 0.31
CCDC57-203ENST00000392343 MLECQ14165 292 aa16.99■□□□□ 0.31
CCDC57-203ENST00000392343 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.99■□□□□ 0.31
CCDC57-203ENST00000392343 DIP2CQ9Y2E4 1556 aa16.98■□□□□ 0.31
CCDC57-203ENST00000392343 PTPRCP08575 1304 aa16.98■□□□□ 0.31
CCDC57-203ENST00000392343 USP48Q86UV5 1035 aa16.98■□□□□ 0.31
CCDC57-203ENST00000392343 C17orf53Q8N3J3 647 aaPredicted RBP16.98■□□□□ 0.31
CCDC57-203ENST00000392343 IL1RAPL2Q9NP60 686 aa16.98■□□□□ 0.31
CCDC57-203ENST00000392343 TSPYL4Q9UJ04 414 aa16.98■□□□□ 0.31
CCDC57-203ENST00000392343 MX1P20591 662 aa16.97■□□□□ 0.31
CCDC57-203ENST00000392343 CPSF1Q10570 1443 aaKnown RBP16.97■□□□□ 0.31
CCDC57-203ENST00000392343 CHMLP26374 656 aa16.97■□□□□ 0.31
CCDC57-203ENST00000392343 TERF1P54274 439 aa16.97■□□□□ 0.31
CCDC57-203ENST00000392343 CCDC61Q9Y6R9 512 aa16.97■□□□□ 0.31
CCDC57-203ENST00000392343 LRRCC1Q9C099 1032 aa16.96■□□□□ 0.31
CCDC57-203ENST00000392343 OSBPL3Q9H4L5 887 aa16.96■□□□□ 0.31
CCDC57-203ENST00000392343 GNAI2P04899 355 aa16.96■□□□□ 0.31
CCDC57-203ENST00000392343 MCCP23508 829 aa16.96■□□□□ 0.31
CCDC57-203ENST00000392343 PLCB2Q00722 1185 aa16.96■□□□□ 0.31
CCDC57-203ENST00000392343 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
CCDC57-203ENST00000392343 PREX1Q8TCU6 1659 aa16.96■□□□□ 0.3
CCDC57-203ENST00000392343 AATKQ6ZMQ8 1374 aa16.95■□□□□ 0.3
CCDC57-203ENST00000392343 CUL4AQ13619 759 aa16.95■□□□□ 0.3
CCDC57-203ENST00000392343 CSPP1Q1MSJ5 1256 aa16.95■□□□□ 0.3
CCDC57-203ENST00000392343 FAM177BA6PVY3 158 aa16.95■□□□□ 0.3
CCDC57-203ENST00000392343 TCHHQ07283 1943 aa16.95■□□□□ 0.3
CCDC57-203ENST00000392343 HAP1P54257 671 aaPredicted RBP16.95■□□□□ 0.3
CCDC57-203ENST00000392343 FKBP5Q13451 457 aaPredicted RBP16.95■□□□□ 0.3
CCDC57-203ENST00000392343 NUTM1Q86Y26 1132 aa16.95■□□□□ 0.3
CCDC57-203ENST00000392343 TTC12Q9H892 705 aaPredicted RBP16.94■□□□□ 0.3
CCDC57-203ENST00000392343 SASS6Q6UVJ0 657 aa16.94■□□□□ 0.3
CCDC57-203ENST00000392343 PRDM10Q9NQV6 1147 aa16.94■□□□□ 0.3
CCDC57-203ENST00000392343 METP08581 1390 aa16.93■□□□□ 0.3
CCDC57-203ENST00000392343 MTHFSDQ2M296 383 aaKnown RBP16.93■□□□□ 0.3
CCDC57-203ENST00000392343 CNPY2Q9Y2B0 182 aa16.93■□□□□ 0.3
CCDC57-203ENST00000392343 KIAA2012Q0VF49 1180 aa16.93■□□□□ 0.3
CCDC57-203ENST00000392343 MCM2P49736 904 aa16.92■□□□□ 0.3
CCDC57-203ENST00000392343 CCT4P50991 539 aaKnown RBP16.92■□□□□ 0.3
CCDC57-203ENST00000392343 RTF1Q92541 710 aaKnown RBP16.92■□□□□ 0.3
CCDC57-203ENST00000392343 LRRFIP2Q9Y608 721 aaKnown RBP16.92■□□□□ 0.3
CCDC57-203ENST00000392343 PRR36Q9H6K5 1346 aa16.92■□□□□ 0.3
CCDC57-203ENST00000392343 MCM5P33992 734 aa16.92■□□□□ 0.3
CCDC57-203ENST00000392343 SRCIN1Q9C0H9 1055 aa16.92■□□□□ 0.3
CCDC57-203ENST00000392343 SALL3Q9BXA9 1300 aa16.92■□□□□ 0.3
CCDC57-203ENST00000392343 HCLS1P14317 486 aaPredicted RBP16.91■□□□□ 0.3
CCDC57-203ENST00000392343 SYAP1Q96A49 352 aaPredicted RBP16.91■□□□□ 0.3
CCDC57-203ENST00000392343 KIAA0232Q92628 1395 aa16.91■□□□□ 0.3
CCDC57-203ENST00000392343 DYNC1I1O14576 645 aa16.91■□□□□ 0.3
CCDC57-203ENST00000392343 CPA1P15085 419 aa16.91■□□□□ 0.3
CCDC57-203ENST00000392343 STK31Q9BXU1 1019 aa16.9■□□□□ 0.3
CCDC57-203ENST00000392343 INTS4Q96HW7 963 aaKnown RBP16.9■□□□□ 0.3
CCDC57-203ENST00000392343 MAP3K19Q56UN5 1328 aa16.89■□□□□ 0.3
CCDC57-203ENST00000392343 ADCY5O95622 1261 aa16.89■□□□□ 0.29
CCDC57-203ENST00000392343 FLIIQ13045 1269 aa16.89■□□□□ 0.29
CCDC57-203ENST00000392343 CRB1P82279 1406 aa16.89■□□□□ 0.29
CCDC57-203ENST00000392343 FIBPO43427 364 aa16.89■□□□□ 0.29
CCDC57-203ENST00000392343 ATP8B2P98198 1209 aa16.88■□□□□ 0.29
CCDC57-203ENST00000392343 WDR33Q9C0J8 1336 aaKnown RBP16.88■□□□□ 0.29
CCDC57-203ENST00000392343 MAP7D2Q96T17 732 aa16.88■□□□□ 0.29
CCDC57-203ENST00000392343 DDX54Q8TDD1 881 aaKnown RBP16.87■□□□□ 0.29
CCDC57-203ENST00000392343 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
CCDC57-203ENST00000392343 ANAPC15P60006 121 aa16.87■□□□□ 0.29
CCDC57-203ENST00000392343 ACEP12821 1306 aa16.87■□□□□ 0.29
CCDC57-203ENST00000392343 NOLC1Q14978 699 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCDC57-203ENST00000392343 GIMAP6Q6P9H5 292 aa16.87■□□□□ 0.29
CCDC57-203ENST00000392343 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
CCDC57-203ENST00000392343 PHF14O94880 888 aa16.86■□□□□ 0.29
CCDC57-203ENST00000392343 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
CCDC57-203ENST00000392343 SURF6O75683 361 aaKnown RBP16.85■□□□□ 0.29
CCDC57-203ENST00000392343 GNAI3P08754 354 aa16.85■□□□□ 0.29
CCDC57-203ENST00000392343 AK2P54819 239 aa16.85■□□□□ 0.29
CCDC57-203ENST00000392343 RPAP1Q9BWH6 1393 aaPredicted RBP16.85■□□□□ 0.29
CCDC57-203ENST00000392343 A2ML1A8K2U0 1454 aa16.85■□□□□ 0.29
CCDC57-203ENST00000392343 HSPA4P34932 840 aa16.85■□□□□ 0.29
CCDC57-203ENST00000392343 CWC27Q6UX04 472 aaKnown RBP16.85■□□□□ 0.29
CCDC57-203ENST00000392343 CHMP3Q9Y3E7 222 aa16.85■□□□□ 0.29
CCDC57-203ENST00000392343 NEO1Q92859 1461 aa16.84■□□□□ 0.29
CCDC57-203ENST00000392343 SYT1P21579 422 aa16.84■□□□□ 0.29
CCDC57-203ENST00000392343 PRDM4Q9UKN5 801 aa16.84■□□□□ 0.29
CCDC57-203ENST00000392343 RIMS1Q86UR5 1692 aaKnown RBP16.84■□□□□ 0.29
CCDC57-203ENST00000392343 CCDC183Q5T5S1 534 aa16.84■□□□□ 0.29
CCDC57-203ENST00000392343 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
CCDC57-203ENST00000392343 USP44Q9H0E7 712 aa16.84■□□□□ 0.29
CCDC57-203ENST00000392343 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
CCDC57-203ENST00000392343 LARGE1O95461 756 aa16.83■□□□□ 0.29
CCDC57-203ENST00000392343 SPC24Q8NBT2 197 aa16.83■□□□□ 0.29
CCDC57-203ENST00000392343 PHAXQ9H814 394 aaKnown RBP16.83■□□□□ 0.29
CCDC57-203ENST00000392343 ZSCAN22P10073 491 aaPredicted RBP16.83■□□□□ 0.28
CCDC57-203ENST00000392343 MYRIPQ8NFW9 859 aa16.83■□□□□ 0.28
CCDC57-203ENST00000392343 PIBF1Q8WXW3 757 aa16.83■□□□□ 0.28
CCDC57-203ENST00000392343 STX6O43752 255 aa16.83■□□□□ 0.28
CCDC57-203ENST00000392343 UBTFL1P0CB47 393 aaPredicted RBP16.83■□□□□ 0.28
CCDC57-203ENST00000392343 RUFY3Q7L099 469 aa16.83■□□□□ 0.28
CCDC57-203ENST00000392343 STAP2Q9UGK3 403 aa16.83■□□□□ 0.28
CCDC57-203ENST00000392343 RIMBP3CA6NJZ7 1639 aa16.82■□□□□ 0.28
CCDC57-203ENST00000392343 RIMBP3BA6NNM3 1639 aa16.82■□□□□ 0.28
CCDC57-203ENST00000392343 RIMBP3Q9UFD9 1639 aa16.82■□□□□ 0.28
CCDC57-203ENST00000392343 DLC1Q96QB1 1528 aa16.82■□□□□ 0.28
CCDC57-203ENST00000392343 AP5Z1O43299 807 aa16.82■□□□□ 0.28
CCDC57-203ENST00000392343 PPP1R42Q7Z4L9 355 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms