RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 TEFQ10587 303 aa23.89■■□□□ 1.42
ERCC2-203ENST00000391944 C1orf141Q5JVX7 400 aa23.89■■□□□ 1.42
ERCC2-203ENST00000391944 NECTIN2Q92692 538 aa23.89■■□□□ 1.41
ERCC2-203ENST00000391944 HOXB7P09629 217 aa23.88■■□□□ 1.41
ERCC2-203ENST00000391944 SLC4A3P48751 1232 aa23.88■■□□□ 1.41
ERCC2-203ENST00000391944 FKBP5Q13451 457 aaPredicted RBP23.88■■□□□ 1.41
ERCC2-203ENST00000391944 BMP2KLQ5H9B9 411 aa23.88■■□□□ 1.41
ERCC2-203ENST00000391944 MPRIPQ6WCQ1 1025 aa23.88■■□□□ 1.41
ERCC2-203ENST00000391944 OVOS2A0A0G2JMS6 1433 aa23.88■■□□□ 1.41
ERCC2-203ENST00000391944 HDGFL1Q5TGJ6 251 aa23.88■■□□□ 1.41
ERCC2-203ENST00000391944 PXDNQ92626 1479 aa23.87■■□□□ 1.41
ERCC2-203ENST00000391944 RNMTO43148 476 aaKnown RBP23.87■■□□□ 1.41
ERCC2-203ENST00000391944 CHMP4AQ9BY43 222 aa23.87■■□□□ 1.41
ERCC2-203ENST00000391944 TNS3Q68CZ2 1445 aa23.86■■□□□ 1.41
ERCC2-203ENST00000391944 XIRP1Q702N8 1843 aaKnown RBP23.86■■□□□ 1.41
ERCC2-203ENST00000391944 BTBD11A6QL63 1104 aa23.85■■□□□ 1.41
ERCC2-203ENST00000391944 COL18A1P39060 1754 aa23.84■■□□□ 1.41
ERCC2-203ENST00000391944 LMTK3Q96Q04 1460 aa23.84■■□□□ 1.41
ERCC2-203ENST00000391944 SPATA31A3Q5VYP0 1347 aa23.84■■□□□ 1.41
ERCC2-203ENST00000391944 NBR1Q14596 966 aa23.83■■□□□ 1.41
ERCC2-203ENST00000391944 STRCQ7RTU9 1775 aa23.83■■□□□ 1.4
ERCC2-203ENST00000391944 KCNQ3O43525 872 aa23.83■■□□□ 1.4
ERCC2-203ENST00000391944 PXDNLA1KZ92 1463 aa23.82■■□□□ 1.4
ERCC2-203ENST00000391944 N4BP2Q86UW6 1770 aaPredicted RBP23.82■■□□□ 1.4
ERCC2-203ENST00000391944 HMMRO75330 724 aa23.82■■□□□ 1.4
ERCC2-203ENST00000391944 GNAI2P04899 355 aa23.82■■□□□ 1.4
ERCC2-203ENST00000391944 KDM4FA0A1W2PPD8 638 aa23.81■■□□□ 1.4
ERCC2-203ENST00000391944 GNAI3P08754 354 aa23.81■■□□□ 1.4
ERCC2-203ENST00000391944 CABLES1Q8TDN4 633 aa23.81■■□□□ 1.4
ERCC2-203ENST00000391944 ADAMTS7Q9UKP4 1686 aa23.8■■□□□ 1.4
ERCC2-203ENST00000391944 CRYBG1Q9Y4K1 1723 aa23.8■■□□□ 1.4
ERCC2-203ENST00000391944 EIF2S2P20042 333 aaKnown RBP23.8■■□□□ 1.4
ERCC2-203ENST00000391944 MFAP1P55081 439 aaKnown RBP23.8■■□□□ 1.4
ERCC2-203ENST00000391944 RAPGEF4Q8WZA2 1011 aa23.8■■□□□ 1.4
ERCC2-203ENST00000391944 C22orf23Q9BZE7 217 aa23.8■■□□□ 1.4
ERCC2-203ENST00000391944 PHAXQ9H814 394 aaKnown RBP23.8■■□□□ 1.4
ERCC2-203ENST00000391944 NLRP2Q9NX02 1062 aa23.8■■□□□ 1.4
ERCC2-203ENST00000391944 ABCC6O95255 1503 aa23.8■■□□□ 1.4
ERCC2-203ENST00000391944 BECN1Q14457 450 aa23.79■■□□□ 1.4
ERCC2-203ENST00000391944 PLEKHM2Q8IWE5 1019 aa23.79■■□□□ 1.4
ERCC2-203ENST00000391944 BRINP3Q76B58 766 aa23.78■■□□□ 1.4
ERCC2-203ENST00000391944 SIPA1L3O60292 1781 aaPredicted RBP23.78■■□□□ 1.4
ERCC2-203ENST00000391944 CPDO75976 1380 aa23.77■■□□□ 1.4
ERCC2-203ENST00000391944 HEG1Q9ULI3 1381 aa23.77■■□□□ 1.4
ERCC2-203ENST00000391944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.77■■□□□ 1.4
ERCC2-203ENST00000391944 CHPF2Q9P2E5 772 aa23.76■■□□□ 1.39
ERCC2-203ENST00000391944 TATP17735 454 aaPredicted RBP23.76■■□□□ 1.39
ERCC2-203ENST00000391944 C16orf71Q8IYS4 520 aaPredicted RBP23.75■■□□□ 1.39
ERCC2-203ENST00000391944 PLEKHG2Q9H7P9 1386 aa23.75■■□□□ 1.39
ERCC2-203ENST00000391944 CHRNA2Q15822 529 aa23.75■■□□□ 1.39
ERCC2-203ENST00000391944 USP44Q9H0E7 712 aa23.75■■□□□ 1.39
ERCC2-203ENST00000391944 GIGYF1O75420 1035 aaPredicted RBP23.74■■□□□ 1.39
ERCC2-203ENST00000391944 SPG7Q9UQ90 795 aa23.74■■□□□ 1.39
ERCC2-203ENST00000391944 CSB-PGBD3P0DP91 1061 aa23.73■■□□□ 1.39
ERCC2-203ENST00000391944 ATP8B2P98198 1209 aa23.73■■□□□ 1.39
ERCC2-203ENST00000391944 DBF4Q9UBU7 674 aaPredicted RBP23.73■■□□□ 1.39
ERCC2-203ENST00000391944 GSPT1P15170 499 aaKnown RBP23.72■■□□□ 1.39
ERCC2-203ENST00000391944 TTC22Q5TAA0 569 aa23.72■■□□□ 1.39
ERCC2-203ENST00000391944 SLAIN2Q9P270 581 aa23.72■■□□□ 1.39
ERCC2-203ENST00000391944 MEGF6O75095 1541 aa23.71■■□□□ 1.39
ERCC2-203ENST00000391944 PHKG2P15735 406 aa23.71■■□□□ 1.39
ERCC2-203ENST00000391944 TBC1D9Q6ZT07 1266 aa23.71■■□□□ 1.39
ERCC2-203ENST00000391944 SRCIN1Q9C0H9 1055 aa23.71■■□□□ 1.39
ERCC2-203ENST00000391944 SCN11AQ9UI33 1791 aa23.71■■□□□ 1.39
ERCC2-203ENST00000391944 ZNF335Q9H4Z2 1342 aaPredicted RBP23.71■■□□□ 1.39
ERCC2-203ENST00000391944 SMARCA5O60264 1052 aaPredicted RBP23.71■■□□□ 1.39
ERCC2-203ENST00000391944 RBM25P49756 843 aaKnown RBP23.71■■□□□ 1.39
ERCC2-203ENST00000391944 USP35Q9P2H5 1018 aa23.71■■□□□ 1.39
ERCC2-203ENST00000391944 RTL5Q5HYW3 569 aaPredicted RBP23.7■■□□□ 1.38
ERCC2-203ENST00000391944 SOS2Q07890 1332 aaPredicted RBP23.7■■□□□ 1.38
ERCC2-203ENST00000391944 PI4KAP2A4QPH2 592 aa23.7■■□□□ 1.38
ERCC2-203ENST00000391944 APBB1O00213 710 aa23.7■■□□□ 1.38
ERCC2-203ENST00000391944 UBTFL1P0CB47 393 aaPredicted RBP23.7■■□□□ 1.38
ERCC2-203ENST00000391944 PI4KAP1Q8N8J0 262 aa23.7■■□□□ 1.38
ERCC2-203ENST00000391944 DNAAF4Q8WXU2 420 aa23.7■■□□□ 1.38
ERCC2-203ENST00000391944 LRRFIP2Q9Y608 721 aaKnown RBP23.7■■□□□ 1.38
ERCC2-203ENST00000391944 CDC45O75419 566 aa23.69■■□□□ 1.38
ERCC2-203ENST00000391944 IFNL2Q8IZJ0 200 aa23.69■■□□□ 1.38
ERCC2-203ENST00000391944 OTUD7AQ8TE49 926 aaPredicted RBP23.69■■□□□ 1.38
ERCC2-203ENST00000391944 KDM6AO15550 1401 aaPredicted RBP23.69■■□□□ 1.38
ERCC2-203ENST00000391944 PNMA6EA0A0J9YXQ4 647 aa23.68■■□□□ 1.38
ERCC2-203ENST00000391944 TBC1D2Q9BYX2 928 aa23.68■■□□□ 1.38
ERCC2-203ENST00000391944 SLC52A2Q9HAB3 445 aa23.68■■□□□ 1.38
ERCC2-203ENST00000391944 BEND3Q5T5X7 828 aa23.68■■□□□ 1.38
ERCC2-203ENST00000391944 ANXA1P04083 346 aa23.67■■□□□ 1.38
ERCC2-203ENST00000391944 ADCY9O60503 1353 aa23.66■■□□□ 1.38
ERCC2-203ENST00000391944 ZNF790Q6PG37 636 aa23.66■■□□□ 1.38
ERCC2-203ENST00000391944 BCL11AQ9H165 835 aa23.66■■□□□ 1.38
ERCC2-203ENST00000391944 EXOC6BQ9Y2D4 811 aa23.66■■□□□ 1.38
ERCC2-203ENST00000391944 EIF5BO60841 1220 aaKnown RBP23.65■■□□□ 1.38
ERCC2-203ENST00000391944 OSBPL3Q9H4L5 887 aa23.65■■□□□ 1.38
ERCC2-203ENST00000391944 PKD1L3Q7Z443 1732 aa23.65■■□□□ 1.38
ERCC2-203ENST00000391944 PRAMEF22A3QJZ6 481 aa23.64■■□□□ 1.38
ERCC2-203ENST00000391944 NFATC2IPQ8NCF5 419 aa23.64■■□□□ 1.38
ERCC2-203ENST00000391944 DCAF5Q96JK2 942 aa23.64■■□□□ 1.38
ERCC2-203ENST00000391944 HYPKQ9NX55 129 aa23.64■■□□□ 1.38
ERCC2-203ENST00000391944 CYP27B1O15528 508 aa23.64■■□□□ 1.37
ERCC2-203ENST00000391944 SSH3Q8TE77 659 aa23.64■■□□□ 1.37
ERCC2-203ENST00000391944 LRRCC1Q9C099 1032 aa23.64■■□□□ 1.37
ERCC2-203ENST00000391944 IBTKQ9P2D0 1353 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 279.3 ms