RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 KDM3BQ7LBC6 1761 aa15.58■□□□□ 0.09
SPTBN1-203ENST00000389980 IPO8O15397 1037 aaKnown RBP15.58■□□□□ 0.08
SPTBN1-203ENST00000389980 BABAM1Q9NWV8 329 aa15.58■□□□□ 0.08
SPTBN1-203ENST00000389980 ADAMTS7Q9UKP4 1686 aa15.58■□□□□ 0.08
SPTBN1-203ENST00000389980 SIPA1L3O60292 1781 aaPredicted RBP15.58■□□□□ 0.08
SPTBN1-203ENST00000389980 ZCRB1Q8TBF4 217 aaKnown RBP15.58■□□□□ 0.08
SPTBN1-203ENST00000389980 PLCH1Q4KWH8 1693 aa15.57■□□□□ 0.08
SPTBN1-203ENST00000389980 MVPQ14764 893 aaKnown RBP15.57■□□□□ 0.08
SPTBN1-203ENST00000389980 TMEM57Q8N5G2 664 aa15.57■□□□□ 0.08
SPTBN1-203ENST00000389980 EIF4A1P60842 406 aaKnown RBP15.56■□□□□ 0.08
SPTBN1-203ENST00000389980 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
SPTBN1-203ENST00000389980 ITPRIPQ8IWB1 547 aa15.56■□□□□ 0.08
SPTBN1-203ENST00000389980 NFATC2IPQ8NCF5 419 aa15.56■□□□□ 0.08
SPTBN1-203ENST00000389980 DDX54Q8TDD1 881 aaKnown RBP15.56■□□□□ 0.08
SPTBN1-203ENST00000389980 SLC52A2Q9HAB3 445 aa15.55■□□□□ 0.08
SPTBN1-203ENST00000389980 MS4A1P11836 297 aa15.55■□□□□ 0.08
SPTBN1-203ENST00000389980 SLC39A6Q13433 755 aa15.55■□□□□ 0.08
SPTBN1-203ENST00000389980 DCAF5Q96JK2 942 aa15.55■□□□□ 0.08
SPTBN1-203ENST00000389980 SHANK3Q9BYB0 1731 aa15.55■□□□□ 0.08
SPTBN1-203ENST00000389980 PLEKHG2Q9H7P9 1386 aa15.54■□□□□ 0.08
SPTBN1-203ENST00000389980 PCDH11XQ9BZA7 1347 aa15.54■□□□□ 0.08
SPTBN1-203ENST00000389980 PCDH11YQ9BZA8 1340 aa15.54■□□□□ 0.08
SPTBN1-203ENST00000389980 G2E3Q7L622 706 aa15.54■□□□□ 0.08
SPTBN1-203ENST00000389980 ARHGAP45Q92619 1136 aa15.53■□□□□ 0.08
SPTBN1-203ENST00000389980 EIF2S2P20042 333 aaKnown RBP15.53■□□□□ 0.08
SPTBN1-203ENST00000389980 PRAMEF22A3QJZ6 481 aa15.52■□□□□ 0.07
SPTBN1-203ENST00000389980 HSP90AB1P08238 724 aaKnown RBP15.52■□□□□ 0.07
SPTBN1-203ENST00000389980 HDGFL1Q5TGJ6 251 aa15.52■□□□□ 0.07
SPTBN1-203ENST00000389980 CCDC30Q5VVM6 783 aa15.52■□□□□ 0.07
SPTBN1-203ENST00000389980 NRAPQ86VF7 1730 aa15.52■□□□□ 0.07
SPTBN1-203ENST00000389980 KAT6BQ8WYB5 2073 aa15.51■□□□□ 0.07
SPTBN1-203ENST00000389980 JCADQ9P266 1359 aa15.51■□□□□ 0.07
SPTBN1-203ENST00000389980 STK31Q9BXU1 1019 aa15.51■□□□□ 0.07
SPTBN1-203ENST00000389980 PCDHB15Q9Y5E8 787 aa15.51■□□□□ 0.07
SPTBN1-203ENST00000389980 ABCC4O15439 1325 aa15.51■□□□□ 0.07
SPTBN1-203ENST00000389980 CABP4P57796 275 aa15.51■□□□□ 0.07
SPTBN1-203ENST00000389980 API5Q9BZZ5 524 aaKnown RBP15.51■□□□□ 0.07
SPTBN1-203ENST00000389980 DDX19BQ9UMR2 479 aa15.51■□□□□ 0.07
SPTBN1-203ENST00000389980 ZNF790Q6PG37 636 aa15.5■□□□□ 0.07
SPTBN1-203ENST00000389980 SKAP1Q86WV1 359 aa15.5■□□□□ 0.07
SPTBN1-203ENST00000389980 RGS12O14924 1447 aa15.5■□□□□ 0.07
SPTBN1-203ENST00000389980 KDM2BQ8NHM5 1336 aa15.5■□□□□ 0.07
SPTBN1-203ENST00000389980 IGHDP01880 384 aa15.49■□□□□ 0.07
SPTBN1-203ENST00000389980 HSPA1LP34931 641 aa15.49■□□□□ 0.07
SPTBN1-203ENST00000389980 C8orf37Q96NL8 207 aa15.49■□□□□ 0.07
SPTBN1-203ENST00000389980 CACNA1FO60840 1977 aa15.49■□□□□ 0.07
SPTBN1-203ENST00000389980 MRC1P22897 1456 aa15.49■□□□□ 0.07
SPTBN1-203ENST00000389980 DISP2A7MBM2 1401 aa15.49■□□□□ 0.07
SPTBN1-203ENST00000389980 GIGYF1O75420 1035 aaPredicted RBP15.49■□□□□ 0.07
SPTBN1-203ENST00000389980 F6X3S4 739 aa15.48■□□□□ 0.07
SPTBN1-203ENST00000389980 CCDC9Q9Y3X0 531 aaKnown RBP15.48■□□□□ 0.07
SPTBN1-203ENST00000389980 RBM19Q9Y4C8 960 aaKnown RBP15.48■□□□□ 0.07
SPTBN1-203ENST00000389980 SOS1Q07889 1333 aaPredicted RBP15.48■□□□□ 0.07
SPTBN1-203ENST00000389980 SPATA31A1Q5TZJ5 1347 aa15.48■□□□□ 0.07
SPTBN1-203ENST00000389980 SLIT2O94813 1529 aa15.48■□□□□ 0.07
SPTBN1-203ENST00000389980 ANXA1P04083 346 aa15.48■□□□□ 0.07
SPTBN1-203ENST00000389980 NKX1-1Q15270 411 aaPredicted RBP15.48■□□□□ 0.07
SPTBN1-203ENST00000389980 CHPF2Q9P2E5 772 aa15.48■□□□□ 0.07
SPTBN1-203ENST00000389980 HEG1Q9ULI3 1381 aa15.48■□□□□ 0.07
SPTBN1-203ENST00000389980 PTPRCP08575 1304 aa15.47■□□□□ 0.07
SPTBN1-203ENST00000389980 FLIIQ13045 1269 aa15.47■□□□□ 0.07
SPTBN1-203ENST00000389980 NGLY1Q96IV0 654 aa15.47■□□□□ 0.07
SPTBN1-203ENST00000389980 PHAXQ9H814 394 aaKnown RBP15.47■□□□□ 0.07
SPTBN1-203ENST00000389980 WNK3Q9BYP7 1800 aa15.47■□□□□ 0.07
SPTBN1-203ENST00000389980 HOXB7P09629 217 aa15.46■□□□□ 0.07
SPTBN1-203ENST00000389980 ZNF496Q96IT1 587 aaPredicted RBP15.46■□□□□ 0.07
SPTBN1-203ENST00000389980 ZBTB40Q9NUA8 1239 aa15.46■□□□□ 0.07
SPTBN1-203ENST00000389980 NWD2Q9ULI1 1742 aa15.46■□□□□ 0.07
SPTBN1-203ENST00000389980 TOGARAM1Q9Y4F4 1720 aa15.46■□□□□ 0.07
SPTBN1-203ENST00000389980 ZBTB7BO15156 539 aaPredicted RBP15.46■□□□□ 0.07
SPTBN1-203ENST00000389980 FKBP5Q13451 457 aaPredicted RBP15.46■□□□□ 0.07
SPTBN1-203ENST00000389980 CENPQQ7L2Z9 268 aaPredicted RBP15.46■□□□□ 0.07
SPTBN1-203ENST00000389980 LRP6O75581 1613 aa15.45■□□□□ 0.06
SPTBN1-203ENST00000389980 C5P01031 1676 aa15.45■□□□□ 0.06
SPTBN1-203ENST00000389980 SLC4A10Q6U841 1118 aa15.45■□□□□ 0.06
SPTBN1-203ENST00000389980 TTC5Q8N0Z6 440 aa15.45■□□□□ 0.06
SPTBN1-203ENST00000389980 SPATA31A5Q5VU36 1347 aa15.45■□□□□ 0.06
SPTBN1-203ENST00000389980 SPATA31A7Q8IWB4 1347 aa15.45■□□□□ 0.06
SPTBN1-203ENST00000389980 ERVV-2B6SEH9 535 aa15.45■□□□□ 0.06
SPTBN1-203ENST00000389980 EXOC5O00471 708 aa15.45■□□□□ 0.06
SPTBN1-203ENST00000389980 AAMPQ13685 434 aa15.45■□□□□ 0.06
SPTBN1-203ENST00000389980 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
SPTBN1-203ENST00000389980 PROSER3Q2NL68 480 aa15.44■□□□□ 0.06
SPTBN1-203ENST00000389980 INTS3Q68E01 1043 aaKnown RBP15.43■□□□□ 0.06
SPTBN1-203ENST00000389980 UNC5CLQ8IV45 518 aa15.43■□□□□ 0.06
SPTBN1-203ENST00000389980 BCL9LQ86UU0 1499 aa15.43■□□□□ 0.06
SPTBN1-203ENST00000389980 SPATA31A6Q5VVP1 1343 aa15.42■□□□□ 0.06
SPTBN1-203ENST00000389980 THRAP3Q9Y2W1 955 aaKnown RBP15.42■□□□□ 0.06
SPTBN1-203ENST00000389980 USP16Q9Y5T5 823 aa15.42■□□□□ 0.06
SPTBN1-203ENST00000389980 ITGB4P16144 1822 aa15.42■□□□□ 0.06
SPTBN1-203ENST00000389980 FMNL2Q96PY5 1086 aa15.41■□□□□ 0.06
SPTBN1-203ENST00000389980 DBF4Q9UBU7 674 aaPredicted RBP15.41■□□□□ 0.06
SPTBN1-203ENST00000389980 DDB1Q16531 1140 aa15.41■□□□□ 0.06
SPTBN1-203ENST00000389980 TMOD3Q9NYL9 352 aa15.41■□□□□ 0.06
SPTBN1-203ENST00000389980 TNS2Q63HR2 1409 aa15.4■□□□□ 0.06
SPTBN1-203ENST00000389980 PTCD1O75127 700 aaKnown RBP15.4■□□□□ 0.06
SPTBN1-203ENST00000389980 SNRPA1P09661 255 aaKnown RBP15.4■□□□□ 0.06
SPTBN1-203ENST00000389980 PIP4K2AP48426 406 aaPredicted RBP15.4■□□□□ 0.06
SPTBN1-203ENST00000389980 GLI3P10071 1580 aa15.39■□□□□ 0.05
SPTBN1-203ENST00000389980 PDIA6Q15084 440 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms